Incidental Mutation 'R7507:Trim62'
ID581836
Institutional Source Beutler Lab
Gene Symbol Trim62
Ensembl Gene ENSMUSG00000041000
Gene Nametripartite motif-containing 62
Synonyms
MMRRC Submission
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.120) question?
Stock #R7507 (G1)
Quality Score225.009
Status Validated
Chromosome4
Chromosomal Location128883580-128911328 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 128896871 bp
ZygosityHeterozygous
Amino Acid Change Threonine to Alanine at position 154 (T154A)
Ref Sequence ENSEMBL: ENSMUSP00000039121 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000035667] [ENSMUST00000147852]
Predicted Effect probably benign
Transcript: ENSMUST00000035667
AA Change: T154A

PolyPhen 2 Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)
SMART Domains Protein: ENSMUSP00000039121
Gene: ENSMUSG00000041000
AA Change: T154A

DomainStartEndE-ValueType
RING 11 53 1.85e-8 SMART
Pfam:zf-B_box 88 128 4e-8 PFAM
low complexity region 133 147 N/A INTRINSIC
PRY 294 347 2.07e-20 SMART
Pfam:SPRY 350 467 1.1e-16 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000147852
SMART Domains Protein: ENSMUSP00000123646
Gene: ENSMUSG00000041000

DomainStartEndE-ValueType
RING 11 53 1.85e-8 SMART
Pfam:zf-B_box 88 128 1.9e-9 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.2%
Validation Efficiency 100% (43/43)
MGI Phenotype PHENOTYPE: Mice heterozygous or homozygous for a targeted allele exhibit increased tumorigenesis. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2m A T 6: 121,675,218 T1359S probably benign Het
Adam8 C T 7: 139,987,178 probably null Het
Adnp2 A G 18: 80,130,853 S114P probably benign Het
BC051019 T A 7: 109,716,268 D260V possibly damaging Het
Btnl10 A G 11: 58,920,558 T236A probably benign Het
Cacna1c A T 6: 119,057,239 L109Q Het
Clint1 C A 11: 45,908,949 Q512K possibly damaging Het
Dopey1 A G 9: 86,535,949 N1957S probably benign Het
Gosr1 A T 11: 76,754,414 N101K probably benign Het
Gria1 A G 11: 57,228,939 T350A probably benign Het
Hs3st5 T A 10: 36,833,015 V182D probably damaging Het
Igkv4-80 G T 6: 69,016,693 S71R probably benign Het
Kif2b A G 11: 91,577,443 F5L probably benign Het
Med1 A G 11: 98,158,026 L648P probably damaging Het
Mgat4a G A 1: 37,452,527 L375F probably damaging Het
Mlph A T 1: 90,927,707 probably benign Het
Nbeal1 T C 1: 60,235,467 S346P probably damaging Het
Nhlrc2 G A 19: 56,597,378 V682I not run Het
Nos3 T C 5: 24,372,644 M552T probably damaging Het
Olfr1152 T C 2: 87,868,369 I126T probably damaging Het
Olfr1509 A G 14: 52,450,473 N20S probably benign Het
Olfr799 T A 10: 129,647,497 I123N probably damaging Het
Pcdha5 A T 18: 36,960,856 R139S probably benign Het
Pik3r1 G A 13: 101,708,982 S147L probably benign Het
Plppr4 T A 3: 117,322,105 H701L possibly damaging Het
Pnpla1 T C 17: 28,876,817 Y71H probably damaging Het
Ppp1r12c G A 7: 4,483,971 A521V probably benign Het
Rasgrp3 C A 17: 75,497,060 D119E probably damaging Het
Rnf216 A T 5: 143,089,802 D342E probably damaging Het
Rnpc3 A T 3: 113,616,761 S294T probably benign Het
Sepsecs A G 5: 52,644,055 F422L probably damaging Het
Sgcz T A 8: 37,953,046 E17D probably benign Het
Slc2a5 T C 4: 150,125,650 Y31H probably damaging Het
Spag9 A G 11: 94,068,080 E310G probably benign Het
Stat4 A G 1: 52,078,574 Y288C probably damaging Het
Tet1 A G 10: 62,832,892 probably null Het
Tubb4a T C 17: 57,081,642 D128G probably damaging Het
Ube2cbp G A 9: 86,422,886 A301V possibly damaging Het
Utp6 A G 11: 79,942,186 S444P possibly damaging Het
Vasn T C 16: 4,649,481 C431R probably damaging Het
Zfp260 T C 7: 30,104,866 S64P probably damaging Het
Zfp451 A T 1: 33,769,759 M1007K probably damaging Het
Zfp606 C A 7: 12,492,941 Q330K probably benign Het
Other mutations in Trim62
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01530:Trim62 APN 4 128884459 missense probably benign 0.05
R0201:Trim62 UTSW 4 128902550 missense probably benign
R0744:Trim62 UTSW 4 128884215 missense probably damaging 1.00
R1619:Trim62 UTSW 4 128909488 missense probably damaging 0.98
R1834:Trim62 UTSW 4 128909225 missense possibly damaging 0.69
R5223:Trim62 UTSW 4 128909411 missense probably damaging 1.00
R5494:Trim62 UTSW 4 128885206 missense possibly damaging 0.96
R6909:Trim62 UTSW 4 128884228 missense probably damaging 1.00
R6959:Trim62 UTSW 4 128909162 missense probably damaging 1.00
R7544:Trim62 UTSW 4 128902553 missense probably benign 0.04
R7612:Trim62 UTSW 4 128896884 missense probably benign 0.03
R7624:Trim62 UTSW 4 128883678 start gained probably benign
R7817:Trim62 UTSW 4 128900685 missense probably benign
R8404:Trim62 UTSW 4 128909440 missense probably benign 0.01
R8502:Trim62 UTSW 4 128909440 missense probably benign 0.01
R8692:Trim62 UTSW 4 128900672 missense possibly damaging 0.72
Predicted Primers PCR Primer
(F):5'- ACTCAATATGGTGGGTGAGC -3'
(R):5'- TCAGTGACATTGACATTGGGG -3'

Sequencing Primer
(F):5'- GCTATGATGGGAGATGGACATTG -3'
(R):5'- GTAGGTCCCATTCACTTTCTCAAAAG -3'
Posted On2019-10-17