Mutagenetix > Incidental Mutation

Incidental Mutation 'R7577:Or5k15'

586539

Institutional Source

Beutler Lab

Gene Symbol

Or5k15

Ensembl Gene

ENSMUSG00000044029

Gene Name

olfactory receptor family 5 subfamily J member 15

Synonyms

MOR184-6, Olfr178, GA_x54KRFPKG5P-55108059-55107100

MMRRC Submission

045662-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.072) question?

Stock #

R7577 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

58709622-58710581 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 58709629 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Aspartic acid at position 318 (A318D)

Ref Sequence

ENSEMBL: ENSMUSP00000145885 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000058564] [ENSMUST00000206523] [ENSMUST00000215032]

AlphaFold

E9Q9T3

Predicted Effect

probably benign
Transcript: ENSMUST00000058564
AA Change: A318D

PolyPhen 2 Score 0.225 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000049578
Gene: ENSMUSG00000044029
AA Change: A318D

Domain	Start	End	E-Value	Type
Pfam:7tm_4	33	306	1.2e-49	PFAM
Pfam:7TM_GPCR_Srsx	37	262	4.4e-7	PFAM
Pfam:7tm_1	43	312	5.2e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000206523
AA Change: A318D

PolyPhen 2 Score 0.225 (Sensitivity: 0.91; Specificity: 0.88)

Predicted Effect

probably benign
Transcript: ENSMUST00000215032
AA Change: A318D

PolyPhen 2 Score 0.225 (Sensitivity: 0.91; Specificity: 0.88)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 82 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2610008E11Rik	C	T	10: 78,902,325 (GRCm39)	V664M	possibly damaging	Het
Abca4	A	G	3: 121,967,663 (GRCm39)	T2238A	probably damaging	Het
Adss2	G	A	1: 177,595,263 (GRCm39)	Q426*	probably null	Het
Afap1l2	T	C	19: 56,933,199 (GRCm39)	E71G	probably damaging	Het
Afg1l	T	C	10: 42,194,607 (GRCm39)	D395G	probably damaging	Het
Akap9	C	G	5: 4,018,745 (GRCm39)	H1109D	probably benign	Het
Alms1	A	G	6: 85,592,302 (GRCm39)	T385A	probably benign	Het
Ank3	C	T	10: 69,828,402 (GRCm39)	T2357I		Het
Ankfn1	T	A	11: 89,394,797 (GRCm39)	S263C	probably benign	Het
Atpsckmt	C	T	15: 31,606,186 (GRCm39)	A48V	probably damaging	Het
Azin1	C	T	15: 38,501,665 (GRCm39)	V29I	probably benign	Het
B3galt2	T	C	1: 143,523,042 (GRCm39)	Y393H	probably damaging	Het
Cnbd2	G	T	2: 156,170,296 (GRCm39)	R127L	possibly damaging	Het
Col6a5	A	T	9: 105,741,887 (GRCm39)	L2344*	probably null	Het
Csn3	T	C	5: 88,077,821 (GRCm39)	V109A	not run	Het
Cxcr2	C	G	1: 74,198,074 (GRCm39)	N189K	probably benign	Het
Dclre1a	A	G	19: 56,517,965 (GRCm39)	F1038S	probably damaging	Het
Ddx21	T	C	10: 62,426,449 (GRCm39)	Q468R	probably benign	Het
Dlx6	A	G	6: 6,863,423 (GRCm39)	D15G	probably damaging	Het
Dnajb14	T	C	3: 137,610,558 (GRCm39)	V262A	possibly damaging	Het
Dpp7	A	G	2: 25,245,603 (GRCm39)	V161A	probably benign	Het
Enkur	C	T	2: 21,209,913 (GRCm39)	S16N	probably benign	Het
Ensa	C	A	3: 95,535,956 (GRCm39)	H96Q	probably damaging	Het
Ero1b	T	G	13: 12,617,254 (GRCm39)	C393G	probably damaging	Het
Fbxo3	T	C	2: 103,881,543 (GRCm39)	F292L	possibly damaging	Het
Fcgbpl1	A	G	7: 27,853,848 (GRCm39)	D1604G	possibly damaging	Het
Fos	T	C	12: 85,521,871 (GRCm39)	S102P	probably benign	Het
Foxs1	C	T	2: 152,774,361 (GRCm39)	G231S	probably benign	Het
Furin	T	C	7: 80,046,734 (GRCm39)	D174G	probably damaging	Het
Gbp10	G	A	5: 105,384,015 (GRCm39)		probably benign	Het
Git2	C	T	5: 114,904,550 (GRCm39)	R123H	probably damaging	Het
Gm32687	T	A	10: 81,716,023 (GRCm39)	C472S	probably damaging	Het
Gmip	A	G	8: 70,267,085 (GRCm39)	E327G	probably benign	Het
Gpld1	A	G	13: 25,146,388 (GRCm39)	T211A	probably benign	Het
Grin2d	T	C	7: 45,511,803 (GRCm39)	H214R	probably benign	Het
Hfm1	T	C	5: 107,043,909 (GRCm39)	T576A	probably benign	Het
Hnrnpd	A	T	5: 100,115,113 (GRCm39)	F142I	probably damaging	Het
Krt32	T	A	11: 99,972,047 (GRCm39)	T434S	probably benign	Het
Lct	T	G	1: 128,228,469 (GRCm39)	D1008A	probably damaging	Het
Man1c1	A	G	4: 134,291,814 (GRCm39)		probably null	Het
Marchf7	T	A	2: 60,060,048 (GRCm39)	C58*	probably null	Het
Mccc1	C	T	3: 36,029,943 (GRCm39)		probably null	Het
Mybpc1	T	A	10: 88,385,187 (GRCm39)	D484V	probably damaging	Het
Myh10	T	A	11: 68,636,806 (GRCm39)	C227S	unknown	Het
Niban1	T	A	1: 151,594,063 (GRCm39)	V916E	probably benign	Het
Nin	T	C	12: 70,109,480 (GRCm39)	E153G		Het
Nr1h2	G	A	7: 44,200,216 (GRCm39)	T313M	probably damaging	Het
Or4g7	T	A	2: 111,309,477 (GRCm39)	I116K	probably damaging	Het
Otog	C	A	7: 45,937,279 (GRCm39)	H1663N	possibly damaging	Het
Piezo2	G	T	18: 63,186,081 (GRCm39)	T1696K	probably benign	Het
Plcd1	A	T	9: 118,901,322 (GRCm39)	N703K	possibly damaging	Het
Plekhg4	T	A	8: 106,102,031 (GRCm39)	C7S	probably benign	Het
Pnma2	A	G	14: 67,153,428 (GRCm39)		probably benign	Het
Potegl	A	G	2: 23,097,837 (GRCm39)	Y5C	probably benign	Het
Prag1	A	G	8: 36,614,096 (GRCm39)	Y1216C	probably damaging	Het
Prima1	T	C	12: 103,163,566 (GRCm39)	Y135C	probably damaging	Het
Prkce	C	A	17: 86,800,721 (GRCm39)	S379*	probably null	Het
Prmt7	A	G	8: 106,968,835 (GRCm39)	N383S	probably damaging	Het
Ptafr	A	G	4: 132,307,063 (GRCm39)	Y151C	probably damaging	Het
Ptprn2	T	C	12: 116,449,486 (GRCm39)	M1T	probably null	Het
Rad23a	A	T	8: 85,565,108 (GRCm39)	S136T	probably benign	Het
Rnf123	A	T	9: 107,947,818 (GRCm39)	Y137N	probably damaging	Het
Sfxn4	A	C	19: 60,842,324 (GRCm39)	I126S	probably benign	Het
Slc4a4	A	G	5: 89,373,726 (GRCm39)	H935R	probably damaging	Het
Slitrk3	T	G	3: 72,958,448 (GRCm39)	N108T	probably damaging	Het
Spred1	T	A	2: 117,007,806 (GRCm39)	H237Q	probably benign	Het
Syne1	T	A	10: 5,074,820 (GRCm39)	K1168N	probably damaging	Het
Syt14	T	C	1: 192,665,885 (GRCm39)	K340E	unknown	Het
Tespa1	T	C	10: 130,190,624 (GRCm39)	S84P	probably damaging	Het
Tmem268	G	T	4: 63,480,681 (GRCm39)		probably benign	Het
Tmem52b	T	A	6: 129,493,040 (GRCm39)	Y48*	probably null	Het
Tox2	C	A	2: 163,157,822 (GRCm39)	Y295*	probably null	Het
Trp53bp1	T	G	2: 121,067,119 (GRCm39)	T536P	possibly damaging	Het
Tysnd1	T	C	10: 61,531,665 (GRCm39)	C106R	probably benign	Het
Unc5d	T	C	8: 29,381,449 (GRCm39)	I63V	probably damaging	Het
Vmn1r235	A	G	17: 21,481,881 (GRCm39)	N69D	possibly damaging	Het
Vps11	A	T	9: 44,260,258 (GRCm39)	M868K	probably benign	Het
Wipf3	A	G	6: 54,462,509 (GRCm39)	T240A	possibly damaging	Het
Xirp2	G	A	2: 67,345,309 (GRCm39)	E2517K	possibly damaging	Het
Ylpm1	T	A	12: 85,043,994 (GRCm39)	L244Q	unknown	Het
Zdhhc18	G	T	4: 133,342,520 (GRCm39)	S198*	probably null	Het
Zfp760	T	A	17: 21,941,242 (GRCm39)	L139*	probably null	Het

Other mutations in Or5k15

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00953:Or5k15	APN	16	58,710,048 (GRCm39)	missense	probably damaging	0.97
IGL01964:Or5k15	APN	16	58,709,827 (GRCm39)	missense	probably damaging	0.97
IGL02122:Or5k15	APN	16	58,710,134 (GRCm39)	missense	probably benign
IGL02183:Or5k15	APN	16	58,710,184 (GRCm39)	missense	probably benign	0.00
IGL03143:Or5k15	APN	16	58,709,824 (GRCm39)	missense	probably damaging	1.00
R1566:Or5k15	UTSW	16	58,709,903 (GRCm39)	missense	probably damaging	1.00
R2324:Or5k15	UTSW	16	58,710,503 (GRCm39)	missense	probably benign
R2420:Or5k15	UTSW	16	58,710,328 (GRCm39)	missense	probably benign	0.00
R2421:Or5k15	UTSW	16	58,710,328 (GRCm39)	missense	probably benign	0.00
R2422:Or5k15	UTSW	16	58,710,328 (GRCm39)	missense	probably benign	0.00
R4256:Or5k15	UTSW	16	58,710,143 (GRCm39)	missense	probably benign	0.21
R4374:Or5k15	UTSW	16	58,710,242 (GRCm39)	missense	probably benign	0.13
R4502:Or5k15	UTSW	16	58,710,539 (GRCm39)	missense	probably benign	0.02
R4503:Or5k15	UTSW	16	58,710,539 (GRCm39)	missense	probably benign	0.02
R4662:Or5k15	UTSW	16	58,710,287 (GRCm39)	missense	probably damaging	1.00
R4967:Or5k15	UTSW	16	58,709,957 (GRCm39)	missense	possibly damaging	0.48
R5206:Or5k15	UTSW	16	58,710,381 (GRCm39)	missense	probably damaging	0.99
R5285:Or5k15	UTSW	16	58,710,471 (GRCm39)	nonsense	probably null
R5477:Or5k15	UTSW	16	58,710,107 (GRCm39)	missense	probably benign	0.10
R5554:Or5k15	UTSW	16	58,710,169 (GRCm39)	missense	possibly damaging	0.95
R5723:Or5k15	UTSW	16	58,709,976 (GRCm39)	nonsense	probably null
R5725:Or5k15	UTSW	16	58,710,250 (GRCm39)	missense	possibly damaging	0.64
R6853:Or5k15	UTSW	16	58,710,122 (GRCm39)	missense	probably damaging	0.99
R6853:Or5k15	UTSW	16	58,710,121 (GRCm39)	missense	possibly damaging	0.64
R7238:Or5k15	UTSW	16	58,710,252 (GRCm39)	missense	probably damaging	1.00
R7554:Or5k15	UTSW	16	58,709,769 (GRCm39)	missense	probably benign	0.27
R7787:Or5k15	UTSW	16	58,709,953 (GRCm39)	missense	probably benign
R8008:Or5k15	UTSW	16	58,710,251 (GRCm39)	missense	probably benign	0.13
R8140:Or5k15	UTSW	16	58,709,948 (GRCm39)	missense	probably benign	0.10
R8928:Or5k15	UTSW	16	58,709,750 (GRCm39)	missense	possibly damaging	0.75
R9082:Or5k15	UTSW	16	58,709,834 (GRCm39)	missense	probably damaging	1.00
R9285:Or5k15	UTSW	16	58,710,569 (GRCm39)	nonsense	probably null
R9414:Or5k15	UTSW	16	58,710,565 (GRCm39)	missense	probably benign	0.03
R9627:Or5k15	UTSW	16	58,709,771 (GRCm39)	missense	probably benign	0.01
R9745:Or5k15	UTSW	16	58,710,265 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCACAGTTGTTCAATTAACCAGAC -3'
(R):5'- GGAAAAGCACTTTCTACCTGTG -3'

Sequencing Primer
(F):5'- CAGACAATCTTAATCAAAGCATATGC -3'
(R):5'- GCCTGTCTTCTCATGTATATTAGACC -3'

Posted On

2019-10-24