Mutagenetix > Incidental Mutation

Incidental Mutation 'R7599:Cyp2f2'

587900

Institutional Source

Beutler Lab

Gene Symbol

Cyp2f2

Ensembl Gene

ENSMUSG00000052974

Gene Name

cytochrome P450, family 2, subfamily f, polypeptide 2

Synonyms

Cyp2f

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.120) question?

Stock #

R7599 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

27119909-27133660 bp(+) (GRCm38)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

T to A at 27131359 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000003100 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000003100] [ENSMUST00000003100] [ENSMUST00000206552]

AlphaFold

P33267

Predicted Effect

probably null
Transcript: ENSMUST00000003100

SMART Domains

Protein: ENSMUSP00000003100
Gene: ENSMUSG00000052974

Domain	Start	End	E-Value	Type
signal peptide	1	28	N/A	INTRINSIC
Pfam:p450	31	488	3.7e-152	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000003100

SMART Domains

Protein: ENSMUSP00000003100
Gene: ENSMUSG00000052974

Domain	Start	End	E-Value	Type
signal peptide	1	28	N/A	INTRINSIC
Pfam:p450	31	488	3.7e-152	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000206552

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the cytochrome P450 superfamily of enzymes. The cytochrome P450 proteins are monooxygenases which catalyze many reactions involved in drug metabolism and synthesis of cholesterol, steroids and other lipids. This protein localizes to the endoplasmic reticulum and is known to dehydrogenate 3-methylindole, an endogenous toxin derived from the fermentation of tryptophan, as well as xenobiotic substrates such as naphthalene and ethoxycoumarin. This gene is part of a large cluster of cytochrome P450 genes from the CYP2A, CYP2B and CYP2F subfamilies on chromosome 19q. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit resistance to napthalene-induced toxicity in the lungs. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210016F16Rik	T	A	13: 58,381,835	H321L	probably damaging	Het
Adamts3	T	C	5: 89,861,397	S136G	probably benign	Het
Apba3	T	A	10: 81,272,346	N445K	probably damaging	Het
Aqp6	A	G	15: 99,603,771	K237E	possibly damaging	Het
Arhgap23	A	G	11: 97,500,343	T1229A	probably benign	Het
Bpifb1	T	C	2: 154,214,151	I379T	probably damaging	Het
Ccdc169	A	G	3: 55,140,109	D7G	probably damaging	Het
Daam2	T	A	17: 49,480,727	K453*	probably null	Het
Dennd4c	T	C	4: 86,811,612	L817P	probably damaging	Het
Efcab6	T	A	15: 83,870,988	R1376W	probably damaging	Het
Esrra	G	T	19: 6,913,846	A182E	possibly damaging	Het
Fam234b	T	A	6: 135,226,876	V392E	probably damaging	Het
Fanca	A	G	8: 123,271,260	V1229A	probably benign	Het
Fdps	G	T	3: 89,099,386	Q66K	probably benign	Het
Fer1l6	T	A	15: 58,627,589	D1269E	probably benign	Het
Foxred1	G	A	9: 35,205,636	R353W	probably damaging	Het
Gabrg2	C	T	11: 41,967,624	V226I	possibly damaging	Het
Gcnt2	C	A	13: 40,860,867	C171*	probably null	Het
Glyat	C	A	19: 12,639,808	A8E	probably damaging	Het
Golgb1	C	A	16: 36,875,396	R86S	unknown	Het
Hc	T	A	2: 35,050,419	T136S	probably damaging	Het
Hdac1	G	T	4: 129,517,466	S421*	probably null	Het
Hmcn2	G	T	2: 31,356,286	A756S	possibly damaging	Het
Igkv8-26	A	G	6: 70,193,587	N54S	probably benign	Het
Impad1	G	A	4: 4,778,207	T177I	probably damaging	Het
Itgae	T	A	11: 73,121,960	V706E	possibly damaging	Het
Itgax	G	A	7: 128,148,090	V992M	probably damaging	Het
Klk10	A	G	7: 43,784,427	D221G	probably benign	Het
Klkb1	T	C	8: 45,278,113	I205V	probably benign	Het
Kpna2	T	C	11: 106,998,757	N8S	probably null	Het
L3mbtl1	A	C	2: 162,964,514	T442P	possibly damaging	Het
Lrp1b	C	T	2: 40,661,549	C4181Y		Het
Mcat	T	C	15: 83,547,671	Y332C	probably damaging	Het
Mecom	T	C	3: 29,956,385	D648G	probably damaging	Het
Mesp2	A	T	7: 79,810,969	D14V	probably damaging	Het
Mlh3	A	T	12: 85,268,199	Y404*	probably null	Het
Mterf3	A	T	13: 66,917,148	F230I	probably damaging	Het
Nrxn3	T	C	12: 89,512,062	V602A	probably benign	Het
Olfr1247	T	A	2: 89,609,227	I292F	possibly damaging	Het
Plekhg6	A	G	6: 125,374,660	F209L	probably damaging	Het
Pmp22	C	A	11: 63,158,348	A139D	probably damaging	Het
Polr2e	T	C	10: 80,038,570	D34G	possibly damaging	Het
Ppard	T	A	17: 28,297,117	L105H	probably damaging	Het
Ptpn14	T	A	1: 189,850,745	D596E	probably benign	Het
Ptprz1	C	T	6: 23,002,519	A1536V	not run	Het
Rabgap1	TGGGG	TGGG	2: 37,502,896		probably null	Het
Retreg1	T	A	15: 25,971,641	D222E	probably benign	Het
Rmnd1	T	C	10: 4,413,404	K282R	probably benign	Het
Rsf1	ATGGCG	ATGGCGACGGTGGCG	7: 97,579,904		probably benign	Het
Sall3	C	T	18: 80,972,052	R887H	possibly damaging	Het
Samd3	A	G	10: 26,263,813	D281G	probably benign	Het
Scube1	T	A	15: 83,613,452	D766V	probably damaging	Het
Sec24b	TGC	TGCAGC	3: 130,040,811		probably benign	Het
Slc2a2	A	G	3: 28,698,017	M1V	probably null	Het
Slc39a2	A	T	14: 51,895,031	T144S	probably benign	Het
Slc5a9	T	C	4: 111,877,740	H619R	probably benign	Het
Slco4a1	T	C	2: 180,471,255	F427L	probably benign	Het
Snapc3	C	A	4: 83,417,836	Y28*	probably null	Het
St3gal6	C	T	16: 58,473,437	R243H	probably benign	Het
Stat2	T	A	10: 128,277,197	N119K	possibly damaging	Het
Syne2	G	C	12: 75,966,371	V2779L	probably benign	Het
Tacc1	T	A	8: 25,201,285	M1L	probably damaging	Het
Tbc1d32	A	T	10: 56,151,833	F724L	possibly damaging	Het
Ttc23l	A	G	15: 10,533,680	I259T	possibly damaging	Het
Ucn2	T	C	9: 108,986,224	I18T	probably benign	Het
Wdr35	G	C	12: 9,024,886	A1000P	probably benign	Het
Wnk1	C	A	6: 119,929,828	C244F	possibly damaging	Het
Zeb2	T	G	2: 44,994,613	D1022A	probably damaging	Het
Zfp26	A	T	9: 20,437,833	H478Q	probably damaging	Het
Zfp410	A	G	12: 84,331,856	K265R	probably benign	Het
Zfp575	T	C	7: 24,586,668	D21G	probably benign	Het

Other mutations in Cyp2f2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00911:Cyp2f2	APN	7	27121929	missense	probably damaging	0.98
IGL00953:Cyp2f2	APN	7	27129817	missense	possibly damaging	0.47
IGL01781:Cyp2f2	APN	7	27130421	missense	probably benign	0.20
IGL02817:Cyp2f2	APN	7	27129315	missense	probably damaging	1.00
IGL03027:Cyp2f2	APN	7	27132571	missense	possibly damaging	0.95
R0464:Cyp2f2	UTSW	7	27132537	missense	probably benign	0.00
R1481:Cyp2f2	UTSW	7	27121877	missense	probably benign	0.00
R1635:Cyp2f2	UTSW	7	27129724	missense	probably benign	0.11
R1826:Cyp2f2	UTSW	7	27132562	missense	probably damaging	1.00
R1989:Cyp2f2	UTSW	7	27129203	missense	probably damaging	1.00
R5098:Cyp2f2	UTSW	7	27129879	missense	possibly damaging	0.52
R6305:Cyp2f2	UTSW	7	27129224	missense	probably damaging	1.00
R6472:Cyp2f2	UTSW	7	27129224	missense	probably damaging	1.00
R7132:Cyp2f2	UTSW	7	27132568	missense	probably benign	0.00
R7814:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R7823:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R7824:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R7825:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R8141:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R8142:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R8143:Cyp2f2	UTSW	7	27129253	missense	probably benign	0.00
R8351:Cyp2f2	UTSW	7	27121869	missense	probably damaging	1.00
R8809:Cyp2f2	UTSW	7	27132570	missense	probably damaging	0.99
R9095:Cyp2f2	UTSW	7	27131242	missense	possibly damaging	0.83
R9548:Cyp2f2	UTSW	7	27129745	missense	probably benign	0.45
R9726:Cyp2f2	UTSW	7	27121986	missense	probably damaging	0.99
X0064:Cyp2f2	UTSW	7	27133284	missense	probably damaging	1.00
Z1177:Cyp2f2	UTSW	7	27121907	missense	possibly damaging	0.52

Predicted Primers

PCR Primer
(F):5'- CGTGCAGGAAGAGATTGACC -3'
(R):5'- GGAGTTCCGATCTCTTCTGATATG -3'

Sequencing Primer
(F):5'- TGCAGGAAGAGATTGACCGTGTG -3'
(R):5'- TTCGGGAGTTCAAGTCCAAC -3'

Posted On

2019-10-24