Incidental Mutation 'R7600:Tubgcp5'
ID 587967
Institutional Source Beutler Lab
Gene Symbol Tubgcp5
Ensembl Gene ENSMUSG00000033790
Gene Name tubulin, gamma complex component 5
Synonyms GCP5, B130010C12Rik
MMRRC Submission 045642-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.967) question?
Stock # R7600 (G1)
Quality Score 225.009
Status Validated
Chromosome 7
Chromosomal Location 55443873-55481207 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 55458261 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 391 (T391A)
Ref Sequence ENSEMBL: ENSMUSP00000032627 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000032627] [ENSMUST00000205796] [ENSMUST00000206191]
AlphaFold Q8BKN5
Predicted Effect probably benign
Transcript: ENSMUST00000032627
AA Change: T391A

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000032627
Gene: ENSMUSG00000033790
AA Change: T391A

DomainStartEndE-ValueType
low complexity region 109 124 N/A INTRINSIC
Pfam:Spc97_Spc98 273 942 1.2e-126 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000205796
AA Change: T391A

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
Predicted Effect probably benign
Transcript: ENSMUST00000206191
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 100% (45/45)
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam25 G A 8: 41,208,854 (GRCm39) V707I probably benign Het
Ahnak A T 19: 8,981,938 (GRCm39) D1074V possibly damaging Het
Aldh4a1 A G 4: 139,372,315 (GRCm39) M495V probably benign Het
Atxn1 T G 13: 45,710,536 (GRCm39) K799Q possibly damaging Het
Catsperg2 A T 7: 29,404,283 (GRCm39) S831T probably benign Het
Cldn1 T C 16: 26,179,669 (GRCm39) T133A probably benign Het
Clec12b A G 6: 129,353,226 (GRCm39) C254R probably damaging Het
Cnnm2 A T 19: 46,750,506 (GRCm39) T99S probably benign Het
Col6a4 T G 9: 105,944,198 (GRCm39) D1092A possibly damaging Het
Dnajc9 A G 14: 20,438,793 (GRCm39) L20P probably damaging Het
Dsp C A 13: 38,375,691 (GRCm39) Q1159K probably damaging Het
Dst C T 1: 34,306,011 (GRCm39) T4110I probably damaging Het
Epb42 A G 2: 120,852,307 (GRCm39) L562P probably damaging Het
Fras1 T C 5: 96,832,295 (GRCm39) Y1543H probably damaging Het
Igkv1-117 T A 6: 68,098,100 (GRCm39) V9E possibly damaging Het
Kbtbd8 T A 6: 95,099,573 (GRCm39) Y361N probably damaging Het
Lrp1 C T 10: 127,391,575 (GRCm39) R2948H probably benign Het
Lrp10 G T 14: 54,706,852 (GRCm39) R563L possibly damaging Het
Mllt3 G T 4: 87,759,456 (GRCm39) H197Q probably benign Het
Myo18b G A 5: 113,025,969 (GRCm39) P27L unknown Het
Nlrp1a C A 11: 70,989,740 (GRCm39) R1110L probably damaging Het
Nol10 T G 12: 17,419,481 (GRCm39) D257E probably damaging Het
Olfm3 T C 3: 114,890,589 (GRCm39) V114A possibly damaging Het
Or2a57 C A 6: 43,212,770 (GRCm39) T76K probably damaging Het
Or2t43 T C 11: 58,458,162 (GRCm39) N3S probably benign Het
Pdzd2 G T 15: 12,372,820 (GRCm39) D2438E probably damaging Het
Prl7a2 T G 13: 27,843,264 (GRCm39) I180L possibly damaging Het
Ptch2 A T 4: 116,953,422 (GRCm39) probably benign Het
Snrpn A G 7: 59,638,351 (GRCm39) M1T probably null Het
Sntb1 A T 15: 55,655,584 (GRCm39) W211R possibly damaging Het
Sp110 G A 1: 85,506,813 (GRCm39) R417C probably benign Het
Sytl2 T C 7: 90,025,352 (GRCm39) S447P probably benign Het
Tas2r129 G T 6: 132,928,137 (GRCm39) G25* probably null Het
Tcstv7a A T 13: 120,290,232 (GRCm39) probably null Het
Tle2 T G 10: 81,422,147 (GRCm39) Y396* probably null Het
Trpm2 T C 10: 77,773,885 (GRCm39) K510R probably benign Het
Trpm3 A G 19: 22,903,458 (GRCm39) T1073A possibly damaging Het
Ttc24 A T 3: 87,979,320 (GRCm39) M1K probably null Het
Vmn1r17 T C 6: 57,337,906 (GRCm39) E153G probably benign Het
Vmn1r232 A T 17: 21,133,999 (GRCm39) N200K possibly damaging Het
Zcwpw1 A T 5: 137,798,396 (GRCm39) K198* probably null Het
Zfp142 A G 1: 74,612,827 (GRCm39) V641A probably damaging Het
Zfp318 C T 17: 46,695,210 (GRCm39) A149V possibly damaging Het
Zfp608 T C 18: 55,121,092 (GRCm39) N165S probably damaging Het
Other mutations in Tubgcp5
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00969:Tubgcp5 APN 7 55,456,343 (GRCm39) missense possibly damaging 0.91
IGL01291:Tubgcp5 APN 7 55,458,277 (GRCm39) missense possibly damaging 0.83
IGL01343:Tubgcp5 APN 7 55,445,779 (GRCm39) splice site probably benign
IGL01597:Tubgcp5 APN 7 55,456,580 (GRCm39) splice site probably benign
IGL01688:Tubgcp5 APN 7 55,464,766 (GRCm39) missense possibly damaging 0.92
IGL01843:Tubgcp5 APN 7 55,449,221 (GRCm39) missense probably benign 0.02
IGL01950:Tubgcp5 APN 7 55,455,836 (GRCm39) missense possibly damaging 0.93
IGL01957:Tubgcp5 APN 7 55,468,505 (GRCm39) missense probably damaging 1.00
IGL02902:Tubgcp5 APN 7 55,456,355 (GRCm39) nonsense probably null
IGL03105:Tubgcp5 APN 7 55,475,329 (GRCm39) missense probably damaging 1.00
ANU05:Tubgcp5 UTSW 7 55,458,277 (GRCm39) missense possibly damaging 0.83
R0078:Tubgcp5 UTSW 7 55,468,643 (GRCm39) missense probably damaging 1.00
R0322:Tubgcp5 UTSW 7 55,464,726 (GRCm39) missense probably damaging 0.98
R0362:Tubgcp5 UTSW 7 55,450,432 (GRCm39) missense probably damaging 1.00
R0449:Tubgcp5 UTSW 7 55,473,315 (GRCm39) missense probably benign
R0488:Tubgcp5 UTSW 7 55,479,086 (GRCm39) missense probably damaging 0.96
R0853:Tubgcp5 UTSW 7 55,464,599 (GRCm39) splice site probably benign
R0885:Tubgcp5 UTSW 7 55,455,803 (GRCm39) nonsense probably null
R1483:Tubgcp5 UTSW 7 55,475,455 (GRCm39) critical splice donor site probably null
R1746:Tubgcp5 UTSW 7 55,458,285 (GRCm39) missense probably benign 0.05
R1766:Tubgcp5 UTSW 7 55,464,768 (GRCm39) missense probably benign 0.15
R2148:Tubgcp5 UTSW 7 55,449,259 (GRCm39) missense probably damaging 1.00
R2229:Tubgcp5 UTSW 7 55,480,629 (GRCm39) missense probably damaging 1.00
R3766:Tubgcp5 UTSW 7 55,480,614 (GRCm39) missense probably damaging 0.98
R4154:Tubgcp5 UTSW 7 55,455,077 (GRCm39) missense probably benign 0.01
R4838:Tubgcp5 UTSW 7 55,443,933 (GRCm39) unclassified probably benign
R4948:Tubgcp5 UTSW 7 55,455,871 (GRCm39) missense probably benign 0.00
R5110:Tubgcp5 UTSW 7 55,458,385 (GRCm39) missense probably damaging 0.96
R5347:Tubgcp5 UTSW 7 55,473,433 (GRCm39) missense probably damaging 1.00
R5417:Tubgcp5 UTSW 7 55,475,409 (GRCm39) missense possibly damaging 0.90
R5574:Tubgcp5 UTSW 7 55,455,077 (GRCm39) missense probably benign 0.01
R5758:Tubgcp5 UTSW 7 55,468,643 (GRCm39) missense probably damaging 1.00
R5957:Tubgcp5 UTSW 7 55,464,710 (GRCm39) missense probably benign 0.03
R6014:Tubgcp5 UTSW 7 55,473,357 (GRCm39) missense probably benign
R6141:Tubgcp5 UTSW 7 55,456,526 (GRCm39) missense probably benign 0.30
R6289:Tubgcp5 UTSW 7 55,445,671 (GRCm39) missense probably benign 0.05
R6511:Tubgcp5 UTSW 7 55,467,140 (GRCm39) nonsense probably null
R6563:Tubgcp5 UTSW 7 55,475,409 (GRCm39) missense possibly damaging 0.90
R6574:Tubgcp5 UTSW 7 55,473,331 (GRCm39) missense probably benign
R6596:Tubgcp5 UTSW 7 55,456,382 (GRCm39) missense probably benign 0.38
R7016:Tubgcp5 UTSW 7 55,443,977 (GRCm39) missense possibly damaging 0.76
R7038:Tubgcp5 UTSW 7 55,455,114 (GRCm39) missense probably damaging 0.99
R7075:Tubgcp5 UTSW 7 55,479,155 (GRCm39) missense probably benign 0.04
R7083:Tubgcp5 UTSW 7 55,450,443 (GRCm39) nonsense probably null
R7213:Tubgcp5 UTSW 7 55,455,860 (GRCm39) missense probably damaging 0.97
R7284:Tubgcp5 UTSW 7 55,473,315 (GRCm39) missense probably benign
R7813:Tubgcp5 UTSW 7 55,450,444 (GRCm39) missense possibly damaging 0.49
R7920:Tubgcp5 UTSW 7 55,466,310 (GRCm39) missense probably benign 0.00
R7948:Tubgcp5 UTSW 7 55,443,996 (GRCm39) missense probably benign 0.01
R8438:Tubgcp5 UTSW 7 55,454,363 (GRCm39) missense possibly damaging 0.67
R8499:Tubgcp5 UTSW 7 55,454,363 (GRCm39) missense possibly damaging 0.67
R9087:Tubgcp5 UTSW 7 55,467,106 (GRCm39) missense probably damaging 1.00
R9211:Tubgcp5 UTSW 7 55,456,331 (GRCm39) missense probably benign 0.05
R9269:Tubgcp5 UTSW 7 55,445,693 (GRCm39) missense possibly damaging 0.94
R9329:Tubgcp5 UTSW 7 55,479,181 (GRCm39) critical splice donor site probably null
R9355:Tubgcp5 UTSW 7 55,467,177 (GRCm39) critical splice donor site probably null
R9498:Tubgcp5 UTSW 7 55,463,233 (GRCm39) missense possibly damaging 0.46
R9687:Tubgcp5 UTSW 7 55,475,327 (GRCm39) critical splice acceptor site probably null
Z1088:Tubgcp5 UTSW 7 55,464,849 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- TACATGAAGTTCAGTGCCCTTTG -3'
(R):5'- ACTGTTTGTTCAGAGGCTTCGC -3'

Sequencing Primer
(F):5'- ACTGCATGGTGGCTCATAAC -3'
(R):5'- GCTTCGCCAACATTGTCATATTCAAG -3'
Posted On 2019-10-24