Incidental Mutation 'R7603:Vmn1r202'
ID |
588130 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r202
|
Ensembl Gene |
ENSMUSG00000094379 |
Gene Name |
vomeronasal 1 receptor 202 |
Synonyms |
V1ri7 |
MMRRC Submission |
045713-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.088)
|
Stock # |
R7603 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
13 |
Chromosomal Location |
22685507-22686415 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 22685790 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Glutamine
at position 209
(L209Q)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000077711
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000078642]
[ENSMUST00000228020]
|
AlphaFold |
Q8R259 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000078642
AA Change: L209Q
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000077711 Gene: ENSMUSG00000094379 AA Change: L209Q
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
5 |
301 |
2.2e-11 |
PFAM |
Pfam:V1R
|
35 |
300 |
5.6e-44 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000228020
AA Change: L209Q
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
Meta Mutation Damage Score |
0.6467 |
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 98.9%
|
Validation Efficiency |
98% (47/48) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 47 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca6 |
T |
C |
11: 110,071,084 (GRCm39) |
K1536E |
possibly damaging |
Het |
Abhd16a |
T |
A |
17: 35,320,936 (GRCm39) |
|
probably null |
Het |
Actrt3 |
C |
T |
3: 30,652,696 (GRCm39) |
A133T |
probably benign |
Het |
Adcy10 |
C |
T |
1: 165,391,806 (GRCm39) |
R1329W |
probably damaging |
Het |
Apol7b |
T |
C |
15: 77,307,656 (GRCm39) |
M280V |
possibly damaging |
Het |
Canx |
A |
T |
11: 50,202,455 (GRCm39) |
D50E |
probably benign |
Het |
Csmd1 |
A |
T |
8: 16,338,696 (GRCm39) |
D470E |
probably damaging |
Het |
Cyp2c23 |
C |
T |
19: 44,003,369 (GRCm39) |
D269N |
probably damaging |
Het |
Ddah1 |
T |
C |
3: 145,464,774 (GRCm39) |
V53A |
probably benign |
Het |
Epha7 |
C |
T |
4: 28,871,937 (GRCm39) |
S422L |
probably benign |
Het |
Fastkd5 |
A |
G |
2: 130,456,961 (GRCm39) |
V543A |
possibly damaging |
Het |
Fggy |
G |
A |
4: 95,657,743 (GRCm39) |
G295R |
probably damaging |
Het |
Frs2 |
T |
C |
10: 116,909,968 (GRCm39) |
T465A |
probably benign |
Het |
Glipr1 |
A |
T |
10: 111,824,737 (GRCm39) |
N156K |
probably benign |
Het |
Gnpnat1 |
C |
T |
14: 45,622,074 (GRCm39) |
V40I |
probably benign |
Het |
H2-Q7 |
T |
C |
17: 35,658,939 (GRCm39) |
L130P |
probably damaging |
Het |
Herc1 |
T |
A |
9: 66,358,665 (GRCm39) |
L86* |
probably null |
Het |
Hspg2 |
T |
C |
4: 137,275,679 (GRCm39) |
L2778P |
probably damaging |
Het |
Hspg2 |
T |
A |
4: 137,284,503 (GRCm39) |
I3487N |
possibly damaging |
Het |
Htra4 |
T |
G |
8: 25,515,716 (GRCm39) |
I441L |
probably benign |
Het |
Ints7 |
A |
T |
1: 191,328,336 (GRCm39) |
H203L |
probably damaging |
Het |
Lama2 |
T |
C |
10: 27,142,676 (GRCm39) |
T601A |
possibly damaging |
Het |
Lin7b |
T |
C |
7: 45,017,856 (GRCm39) |
|
probably benign |
Het |
Lmbr1l |
G |
A |
15: 98,806,572 (GRCm39) |
Q280* |
probably null |
Het |
Lpin3 |
G |
T |
2: 160,745,674 (GRCm39) |
|
probably null |
Het |
Map1lc3b |
A |
T |
8: 122,320,268 (GRCm39) |
H27L |
possibly damaging |
Het |
Mfsd14a |
C |
A |
3: 116,427,532 (GRCm39) |
V369F |
probably damaging |
Het |
Ndufa12 |
C |
T |
10: 94,056,641 (GRCm39) |
A123V |
probably benign |
Het |
Nek9 |
A |
G |
12: 85,350,288 (GRCm39) |
F929L |
probably benign |
Het |
Nup210 |
A |
T |
6: 91,053,679 (GRCm39) |
D279E |
probably benign |
Het |
Or52m2 |
A |
G |
7: 102,264,145 (GRCm39) |
V17A |
probably benign |
Het |
Parp1 |
T |
C |
1: 180,427,777 (GRCm39) |
|
probably null |
Het |
Phc3 |
T |
C |
3: 30,961,601 (GRCm39) |
I944V |
probably damaging |
Het |
Phf20 |
C |
T |
2: 156,144,771 (GRCm39) |
A793V |
probably benign |
Het |
Phf21a |
A |
C |
2: 92,187,352 (GRCm39) |
R540S |
probably benign |
Het |
Pogk |
A |
G |
1: 166,229,480 (GRCm39) |
C124R |
probably benign |
Het |
Rif1 |
C |
T |
2: 51,966,187 (GRCm39) |
S93L |
probably damaging |
Het |
Sanbr |
T |
C |
11: 23,516,191 (GRCm39) |
T709A |
probably benign |
Het |
Sele |
A |
G |
1: 163,877,084 (GRCm39) |
E120G |
probably damaging |
Het |
Slc4a1ap |
T |
C |
5: 31,703,539 (GRCm39) |
L49P |
|
Het |
Snap47 |
T |
C |
11: 59,319,373 (GRCm39) |
D255G |
probably damaging |
Het |
Tcstv3 |
T |
C |
13: 120,779,146 (GRCm39) |
V15A |
probably damaging |
Het |
Tmcc1 |
A |
T |
6: 116,020,092 (GRCm39) |
Y453* |
probably null |
Het |
Tpsg1 |
G |
T |
17: 25,592,184 (GRCm39) |
G86V |
probably damaging |
Het |
Urb1 |
CACTTAC |
CAC |
16: 90,569,461 (GRCm39) |
|
probably benign |
Het |
Usp20 |
T |
A |
2: 30,901,486 (GRCm39) |
V459E |
probably damaging |
Het |
Vps13b |
T |
C |
15: 35,576,585 (GRCm39) |
S998P |
probably damaging |
Het |
|
Other mutations in Vmn1r202 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01472:Vmn1r202
|
APN |
13 |
22,686,159 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01516:Vmn1r202
|
APN |
13 |
22,685,632 (GRCm39) |
missense |
possibly damaging |
0.57 |
IGL01722:Vmn1r202
|
APN |
13 |
22,685,890 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02641:Vmn1r202
|
APN |
13 |
22,686,274 (GRCm39) |
missense |
probably benign |
0.34 |
IGL02863:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02876:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02891:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02943:Vmn1r202
|
APN |
13 |
22,686,364 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03057:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03114:Vmn1r202
|
APN |
13 |
22,685,500 (GRCm39) |
utr 3 prime |
probably benign |
|
IGL03114:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03143:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03159:Vmn1r202
|
APN |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03097:Vmn1r202
|
UTSW |
13 |
22,685,640 (GRCm39) |
missense |
probably benign |
0.00 |
R0611:Vmn1r202
|
UTSW |
13 |
22,685,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1350:Vmn1r202
|
UTSW |
13 |
22,685,886 (GRCm39) |
missense |
probably benign |
0.04 |
R1666:Vmn1r202
|
UTSW |
13 |
22,685,540 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1668:Vmn1r202
|
UTSW |
13 |
22,685,540 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1803:Vmn1r202
|
UTSW |
13 |
22,686,313 (GRCm39) |
missense |
probably benign |
0.00 |
R2035:Vmn1r202
|
UTSW |
13 |
22,685,772 (GRCm39) |
missense |
probably damaging |
0.98 |
R2112:Vmn1r202
|
UTSW |
13 |
22,685,904 (GRCm39) |
missense |
possibly damaging |
0.76 |
R2145:Vmn1r202
|
UTSW |
13 |
22,685,953 (GRCm39) |
missense |
possibly damaging |
0.79 |
R3026:Vmn1r202
|
UTSW |
13 |
22,685,932 (GRCm39) |
missense |
probably benign |
0.03 |
R3808:Vmn1r202
|
UTSW |
13 |
22,686,070 (GRCm39) |
missense |
possibly damaging |
0.83 |
R4714:Vmn1r202
|
UTSW |
13 |
22,685,977 (GRCm39) |
missense |
probably damaging |
1.00 |
R5016:Vmn1r202
|
UTSW |
13 |
22,686,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R5124:Vmn1r202
|
UTSW |
13 |
22,685,920 (GRCm39) |
missense |
probably benign |
0.01 |
R6136:Vmn1r202
|
UTSW |
13 |
22,685,632 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6365:Vmn1r202
|
UTSW |
13 |
22,686,374 (GRCm39) |
missense |
probably benign |
0.12 |
R6982:Vmn1r202
|
UTSW |
13 |
22,685,917 (GRCm39) |
missense |
probably benign |
0.02 |
R7293:Vmn1r202
|
UTSW |
13 |
22,685,872 (GRCm39) |
missense |
probably benign |
0.00 |
R7502:Vmn1r202
|
UTSW |
13 |
22,686,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R7672:Vmn1r202
|
UTSW |
13 |
22,685,850 (GRCm39) |
missense |
probably benign |
0.45 |
R7822:Vmn1r202
|
UTSW |
13 |
22,686,241 (GRCm39) |
missense |
probably damaging |
1.00 |
R7954:Vmn1r202
|
UTSW |
13 |
22,685,871 (GRCm39) |
missense |
probably benign |
0.01 |
R8026:Vmn1r202
|
UTSW |
13 |
22,686,314 (GRCm39) |
missense |
possibly damaging |
0.65 |
R8419:Vmn1r202
|
UTSW |
13 |
22,685,985 (GRCm39) |
missense |
probably damaging |
1.00 |
R9079:Vmn1r202
|
UTSW |
13 |
22,685,602 (GRCm39) |
missense |
probably benign |
0.00 |
R9194:Vmn1r202
|
UTSW |
13 |
22,686,316 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
Predicted Primers |
PCR Primer
(F):5'- TTGCCACTGTGGAACCTGTG -3'
(R):5'- CACCATGGCATGTTCTTGC -3'
Sequencing Primer
(F):5'- CCACTGTGGAACCTGTGTATAAG -3'
(R):5'- TTGCTGCACTATATCACAGCAGG -3'
|
Posted On |
2019-10-24 |