Mutagenetix > Incidental Mutation

Incidental Mutation 'R7638:Olfr175-ps1'

590101

Institutional Source

Beutler Lab

Gene Symbol

Olfr175-ps1

Ensembl Gene

ENSMUSG00000060663

Gene Name

olfactory receptor 175, pseudogene 1

Synonyms

GA_x54KRFPKG5P-55026345-55025418, GA_x54KRFPKG5P-54993816-54992890, MOR184-1, Olfr174, MOR184-10P

MMRRC Submission

045696-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.087) question?

Stock #

R7638 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

58823662-58826782 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 58824595 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Isoleucine at position 38 (T38I)

Ref Sequence

ENSEMBL: ENSMUSP00000150202 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000079955] [ENSMUST00000215069]

AlphaFold

A0A140T8K4

Predicted Effect

probably damaging
Transcript: ENSMUST00000079955
AA Change: T38I

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000078873
Gene: ENSMUSG00000060663
AA Change: T38I

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	307	1.3e-52	PFAM
Pfam:7TM_GPCR_Srsx	35	305	6.8e-6	PFAM
Pfam:7tm_1	41	290	2.5e-18	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000215069
AA Change: T38I

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

Meta Mutation Damage Score

0.4653

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

100% (71/71)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 75 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930563D23Rik	A	G	16: 92,320,917	V161A	probably damaging	Het
Abo	T	G	2: 26,843,843	T115P	probably damaging	Het
Aggf1	G	A	13: 95,356,413	R563*	probably null	Het
Amdhd1	A	T	10: 93,534,498	Y159*	probably null	Het
BC027072	T	C	17: 71,750,885	D599G	probably damaging	Het
C77080	T	C	4: 129,221,941	T1022A	probably benign	Het
Camp	T	C	9: 109,848,393	E124G		Het
Casq2	A	G	3: 102,086,700	E21G	possibly damaging	Het
Cbln1	A	T	8: 87,471,729	F116Y	probably damaging	Het
Cklf	A	T	8: 104,263,364	K143*	probably null	Het
Clca3a1	A	G	3: 144,751,962	I387T	probably damaging	Het
Cndp1	T	A	18: 84,636,049	D130V	probably benign	Het
Cyp4a12a	T	A	4: 115,327,473	M317K	possibly damaging	Het
D13Ertd608e	A	T	13: 119,842,688		probably null	Het
Dmxl2	A	T	9: 54,457,794	I138K	unknown	Het
Eapp	A	G	12: 54,673,723	S236P	probably benign	Het
Efnb3	T	C	11: 69,557,220	H132R	possibly damaging	Het
Fbn2	A	T	18: 58,105,136	N596K	probably damaging	Het
Fzd9	A	G	5: 135,250,630	W134R	probably damaging	Het
Gga2	A	G	7: 122,003,934	S180P	probably damaging	Het
Gm11639	T	A	11: 105,036,799	M4798K	probably benign	Het
Gm30302	G	T	13: 49,786,975	Q420K	probably benign	Het
Golga3	A	G	5: 110,205,828	T911A	probably benign	Het
Gstm1	C	T	3: 108,014,550		probably null	Het
Heg1	A	G	16: 33,727,497	T909A	probably damaging	Het
Herc2	C	T	7: 56,220,525	R4349W	probably damaging	Het
Herc2	T	C	7: 56,157,438	S2455P	probably benign	Het
Hivep2	T	G	10: 14,143,851	M2122R	possibly damaging	Het
Itga10	T	A	3: 96,657,391		probably null	Het
Kbtbd13	G	T	9: 65,391,323	C110*	probably null	Het
Krt78	T	C	15: 101,950,883	E293G	probably damaging	Het
Lgals3bp	C	T	11: 118,398,169	V110M	possibly damaging	Het
Lrp2	A	G	2: 69,477,008		probably null	Het
Lrrc14	A	G	15: 76,713,973	D301G	probably benign	Het
Lrrc71	C	A	3: 87,741,806	G352W	probably damaging	Het
Map3k9	A	G	12: 81,724,732	V694A	probably benign	Het
Mboat2	T	C	12: 24,939,326	S162P	probably damaging	Het
Megf11	C	A	9: 64,679,253	N422K	probably damaging	Het
Miga1	C	T	3: 152,276,687	S584N	probably benign	Het
Mindy2	A	G	9: 70,616,859	Y403H	probably damaging	Het
Mmd	C	T	11: 90,276,757	A204V	possibly damaging	Het
Mta3	A	T	17: 83,800,143	Y262F	probably benign	Het
Ncoa7	G	A	10: 30,722,798	S43F	probably benign	Het
Nphp4	T	C	4: 152,554,534	V874A	probably benign	Het
Nsd1	A	G	13: 55,312,328	T2226A	probably benign	Het
Nt5dc1	T	C	10: 34,314,796	H302R	probably benign	Het
Odc1	A	G	12: 17,550,002	Y389C	probably damaging	Het
Olfr551	A	G	7: 102,587,918	I275T	probably damaging	Het
Olfr970	T	G	9: 39,819,893	F85V	probably damaging	Het
Pcdhb10	A	C	18: 37,412,312	Q147P	probably benign	Het
Pdcl2	A	C	5: 76,317,828	C182G	probably damaging	Het
Pigv	T	C	4: 133,665,451	D136G	possibly damaging	Het
Pramel5	T	C	4: 144,271,440	E411G	possibly damaging	Het
Prkce	T	C	17: 86,168,600	V3A	probably benign	Het
Pth1r	T	C	9: 110,722,393	N546S	probably benign	Het
Qrich2	C	T	11: 116,455,322	V1559I	probably benign	Het
Rbm20	A	C	19: 53,814,333	D424A	possibly damaging	Het
Rbm26	C	T	14: 105,150,848	D393N	probably damaging	Het
Sf3b3	G	A	8: 110,820,813	R728C	probably damaging	Het
Srcap	A	G	7: 127,538,748	N1090S	probably benign	Het
Syt4	A	T	18: 31,443,822	S160T	probably benign	Het
Tfap2e	C	T	4: 126,721,934	V236M	probably damaging	Het
Thsd4	G	A	9: 60,394,472	T180M	probably damaging	Het
Tlr4	T	A	4: 66,840,206	M412K	probably damaging	Het
Tmem67	T	A	4: 12,079,883	H136L	probably benign	Het
Tnpo2	T	A	8: 85,044,415	I110N	probably benign	Het
Trav13d-3	A	G	14: 53,033,413	M111V	probably benign	Het
Tubb3	A	T	8: 123,421,161	S278C	probably benign	Het
Ugcg	T	A	4: 59,220,299	F364Y	probably benign	Het
Usp17lc	T	C	7: 103,418,499	S334P	probably damaging	Het
Vps13c	A	G	9: 67,945,509	D2357G	probably damaging	Het
Zfp157	T	C	5: 138,455,910	Y125H	probably benign	Het
Zfp747	A	T	7: 127,374,647	M117K	probably benign	Het
Znrd1	A	C	17: 36,957,830		probably null	Het
Zscan4c	A	T	7: 11,009,731	N419I	possibly damaging	Het

Other mutations in Olfr175-ps1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01402:Olfr175-ps1	APN	16	58824595	missense	probably damaging	1.00
IGL01404:Olfr175-ps1	APN	16	58824595	missense	probably damaging	1.00
IGL01867:Olfr175-ps1	APN	16	58823974	missense	probably damaging	1.00
IGL02073:Olfr175-ps1	APN	16	58823806	missense	probably benign
IGL02393:Olfr175-ps1	APN	16	58824046	missense	probably damaging	0.99
IGL02474:Olfr175-ps1	APN	16	58824656	missense	probably benign
IGL02548:Olfr175-ps1	APN	16	58824328	missense	probably benign	0.42
IGL02948:Olfr175-ps1	APN	16	58824088	missense	probably benign	0.00
PIT4504001:Olfr175-ps1	UTSW	16	58824308	missense	probably benign	0.00
R0553:Olfr175-ps1	UTSW	16	58824155	missense	probably damaging	0.99
R1191:Olfr175-ps1	UTSW	16	58824559	missense	probably benign
R1201:Olfr175-ps1	UTSW	16	58823863	missense	probably damaging	0.98
R1458:Olfr175-ps1	UTSW	16	58824676	missense	probably null	0.68
R1469:Olfr175-ps1	UTSW	16	58824610	missense	probably benign
R1469:Olfr175-ps1	UTSW	16	58824610	missense	probably benign
R1843:Olfr175-ps1	UTSW	16	58824077	missense	probably damaging	0.99
R2147:Olfr175-ps1	UTSW	16	58824479	missense	probably damaging	0.99
R2421:Olfr175-ps1	UTSW	16	58824346	missense	probably damaging	1.00
R4370:Olfr175-ps1	UTSW	16	58824593	missense	probably benign	0.00
R4621:Olfr175-ps1	UTSW	16	58824106	missense	possibly damaging	0.94
R4622:Olfr175-ps1	UTSW	16	58824106	missense	possibly damaging	0.94
R4623:Olfr175-ps1	UTSW	16	58824106	missense	possibly damaging	0.94
R4711:Olfr175-ps1	UTSW	16	58824706	start codon destroyed	probably null	0.98
R5323:Olfr175-ps1	UTSW	16	58824703	missense	probably benign
R5447:Olfr175-ps1	UTSW	16	58824483	nonsense	probably null
R5457:Olfr175-ps1	UTSW	16	58824433	missense	probably damaging	0.97
R5546:Olfr175-ps1	UTSW	16	58824153	nonsense	probably null
R5623:Olfr175-ps1	UTSW	16	58824343	missense	probably benign	0.02
R5767:Olfr175-ps1	UTSW	16	58823953	missense	probably benign	0.42
R6270:Olfr175-ps1	UTSW	16	58824419	missense	probably damaging	1.00
R6449:Olfr175-ps1	UTSW	16	58824526	missense	probably damaging	1.00
R7356:Olfr175-ps1	UTSW	16	58824355	missense	probably damaging	0.99
R7521:Olfr175-ps1	UTSW	16	58823894	missense	probably benign	0.00
R7814:Olfr175-ps1	UTSW	16	58824002	missense	probably damaging	0.98
R9109:Olfr175-ps1	UTSW	16	58824314	missense	probably damaging	1.00
R9276:Olfr175-ps1	UTSW	16	58824371	missense	probably benign	0.09
R9681:Olfr175-ps1	UTSW	16	58823813	missense	possibly damaging	0.90
X0011:Olfr175-ps1	UTSW	16	58824663	missense	probably benign
Z1176:Olfr175-ps1	UTSW	16	58824307	frame shift	probably null
Z1177:Olfr175-ps1	UTSW	16	58824698	missense	possibly damaging	0.47

Predicted Primers

PCR Primer
(F):5'- CAGTCTGCAGTTTCAGCAAG -3'
(R):5'- GTGTAAATGGTCAGATCACAGTTTCC -3'

Sequencing Primer
(F):5'- CTGTGCCATGCATTCATAGAGAG -3'
(R):5'- ATGGTCAGATCACAGTTTCCATCTG -3'

Posted On

2019-10-24