Mutagenetix > Incidental Mutation

Incidental Mutation 'R7660:Vmn2r70'

591508

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r70

Ensembl Gene

ENSMUSG00000090806

Gene Name

vomeronasal 2, receptor 70

Synonyms

EG620835

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.096) question?

Stock #

R7660 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

85558703-85569088 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 85568922 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Threonine at position 56 (N56T)

Ref Sequence

ENSEMBL: ENSMUSP00000129703 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000168230]

AlphaFold

K7N702

Predicted Effect

probably damaging
Transcript: ENSMUST00000168230
AA Change: N56T

PolyPhen 2 Score 0.985 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000129703
Gene: ENSMUSG00000090806
AA Change: N56T

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Pfam:ANF_receptor	77	468	2.5e-28	PFAM
Pfam:NCD3G	510	562	1.5e-19	PFAM
Pfam:7tm_3	592	830	1.2e-52	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.3%

Validation Efficiency

100% (70/70)

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933427I04Rik	A	T	4: 123,860,719	H142L	possibly damaging	Het
Abca13	A	G	11: 9,290,678	E847G	probably benign	Het
Abca9	T	A	11: 110,115,452	T1276S	probably benign	Het
Abcb11	C	T	2: 69,287,594		probably null	Het
AF366264	A	T	8: 13,837,995	I32K	probably benign	Het
Alpk1	G	C	3: 127,680,967	H462Q	probably damaging	Het
Armh1	C	A	4: 117,213,741	A396S	probably benign	Het
Atm	C	T	9: 53,445,507	V2815M	probably benign	Het
Braf	T	C	6: 39,623,641	I681V	possibly damaging	Het
Casc3	C	G	11: 98,809,873	R4G	unknown	Het
Crybg1	T	C	10: 43,998,835	D759G	probably damaging	Het
Csrp2	A	G	10: 110,937,763	N103S	probably benign	Het
Faf1	A	T	4: 109,861,837	H380L	probably damaging	Het
Farp1	G	A	14: 121,276,922	A888T	probably benign	Het
Fat4	A	T	3: 38,981,160	Q2987L	probably benign	Het
Fkbp15	T	A	4: 62,314,341	T665S	probably benign	Het
Gigyf1	T	C	5: 137,520,969	S343P	probably benign	Het
Glrx3	A	G	7: 137,459,225	Y196C	probably damaging	Het
Gm3278	T	G	14: 4,893,349	L66R	probably damaging	Het
Gm8298	A	G	3: 59,865,268	I64M	probably benign	Het
Ick	G	C	9: 78,167,620	V586L	probably benign	Het
Ifi205	A	G	1: 174,028,248	V72A	probably benign	Het
Ift140	T	G	17: 25,051,824	L708R	probably damaging	Het
Ints13	A	T	6: 146,557,338	L328M	probably benign	Het
Itfg2	A	G	6: 128,424,746	I23T	probably damaging	Het
Ldha	C	T	7: 46,850,257	P100S	unknown	Het
Lmtk2	T	A	5: 144,148,340	L210H	probably damaging	Het
Lrrc4	T	A	6: 28,829,817	I600L	probably benign	Het
Map2	C	A	1: 66,414,377	P809T	probably damaging	Het
Matn2	A	G	15: 34,402,946	K439R	probably benign	Het
Matn2	T	A	15: 34,423,728	C577*	probably null	Het
Mep1a	C	T	17: 43,478,977	G494S	probably benign	Het
Mtmr4	T	C	11: 87,604,580	F488L	probably damaging	Het
Mtus1	G	T	8: 41,016,211	T8K	probably benign	Het
Mug1	C	A	6: 121,861,220	H470N	possibly damaging	Het
Mybpc1	T	C	10: 88,548,854	T523A	possibly damaging	Het
Ncoa3	C	T	2: 166,069,321	P1334S	probably benign	Het
Neb	T	G	2: 52,249,439	M119L		Het
Nox4	T	C	7: 87,370,022	Y408H	probably damaging	Het
Nxpe3	C	T	16: 55,844,327	R510Q	probably damaging	Het
Olfr1077-ps1	A	T	2: 86,525,830	S116T	possibly damaging	Het
Olfr1275	C	T	2: 111,231,615	M59I	probably damaging	Het
Olfr48	T	C	2: 89,844,443	T177A	probably benign	Het
Olfr484	A	G	7: 108,124,834	V143A	probably benign	Het
Olfr807	C	A	10: 129,754,563	E296*	probably null	Het
Olfr839-ps1	T	C	9: 19,175,508	H56R	probably benign	Het
Paip1	C	T	13: 119,450,770	T390I	possibly damaging	Het
Pax8	T	C	2: 24,436,561	Y263C	probably benign	Het
Pcdha11	T	A	18: 37,005,851	Y178N	probably benign	Het
Pcdhga11	C	T	18: 37,757,130	T397M	possibly damaging	Het
Pdlim5	G	T	3: 142,259,185	H428N	probably damaging	Het
Pigg	G	A	5: 108,338,619	V713I	probably benign	Het
Rgs3	A	G	4: 62,701,112	D478G	possibly damaging	Het
Scgb2b11	C	T	7: 32,210,458	E68K	probably damaging	Het
Sema4b	C	A	7: 80,220,247	Q428K	probably benign	Het
Serpine2	T	C	1: 79,802,905	T276A	probably benign	Het
Sgo2b	G	A	8: 63,940,074	H110Y	probably benign	Het
Slc12a7	T	C	13: 73,806,089	L833S	probably benign	Het
Slc6a15	T	A	10: 103,393,380		probably null	Het
Srfbp1	G	A	18: 52,475,599	V24I	probably damaging	Het
Stpg2	A	T	3: 139,701,697	N537Y	probably damaging	Het
Svep1	A	T	4: 58,087,782	S1766T	probably benign	Het
Tiam2	T	A	17: 3,482,605	M1K	probably null	Het
Tmem245	A	T	4: 56,899,170	I661K	possibly damaging	Het
Trim5	T	C	7: 104,279,362	H124R	probably damaging	Het
Trim67	T	A	8: 124,820,285	L478Q	probably damaging	Het
Triml2	A	G	8: 43,193,320	D282G	probably damaging	Het
Txndc11	T	C	16: 11,087,929	Y579C	probably damaging	Het
Ube3c	T	A	5: 29,619,631	D551E	probably damaging	Het
Vmn1r194	T	C	13: 22,244,597	V128A	not run	Het
Vmn2r-ps130	T	A	17: 23,077,032	D725E	probably damaging	Het
Wdr95	T	C	5: 149,594,480	V501A	possibly damaging	Het
Zc3h8	T	C	2: 128,930,822	T249A	probably damaging	Het
Zfp54	T	C	17: 21,434,239	C332R	probably damaging	Het

Other mutations in Vmn2r70

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00978:Vmn2r70	APN	7	85563799	missense	probably benign	0.00
IGL01140:Vmn2r70	APN	7	85565171	nonsense	probably null
IGL01287:Vmn2r70	APN	7	85569019	nonsense	probably null
IGL01581:Vmn2r70	APN	7	85563914	splice site	probably null
IGL01632:Vmn2r70	APN	7	85566072	missense	probably benign	0.00
IGL01725:Vmn2r70	APN	7	85559386	missense	probably damaging	1.00
IGL02244:Vmn2r70	APN	7	85565003	missense	probably benign
IGL02288:Vmn2r70	APN	7	85565134	missense	probably benign	0.31
IGL02313:Vmn2r70	APN	7	85565168	missense	probably damaging	0.99
IGL02591:Vmn2r70	APN	7	85564945	missense	probably damaging	0.96
IGL02725:Vmn2r70	APN	7	85565345	missense	possibly damaging	0.46
IGL02797:Vmn2r70	APN	7	85559087	missense	probably benign	0.00
R0045:Vmn2r70	UTSW	7	85566044	missense	probably damaging	1.00
R0729:Vmn2r70	UTSW	7	85565904	missense	probably benign	0.00
R0967:Vmn2r70	UTSW	7	85559619	missense	probably damaging	0.99
R1217:Vmn2r70	UTSW	7	85559061	missense	probably damaging	1.00
R1351:Vmn2r70	UTSW	7	85565054	missense	probably damaging	1.00
R1387:Vmn2r70	UTSW	7	85558761	missense	probably benign	0.12
R1483:Vmn2r70	UTSW	7	85559167	missense	probably benign	0.04
R1796:Vmn2r70	UTSW	7	85563803	nonsense	probably null
R1809:Vmn2r70	UTSW	7	85565922	missense	probably benign	0.23
R2154:Vmn2r70	UTSW	7	85563715	missense	possibly damaging	0.67
R2173:Vmn2r70	UTSW	7	85565082	missense	probably benign
R2334:Vmn2r70	UTSW	7	85559592	missense	probably benign	0.05
R2871:Vmn2r70	UTSW	7	85559019	missense	probably damaging	1.00
R2871:Vmn2r70	UTSW	7	85559019	missense	probably damaging	1.00
R3975:Vmn2r70	UTSW	7	85559332	missense	probably benign	0.00
R4525:Vmn2r70	UTSW	7	85559579	missense	probably damaging	1.00
R4527:Vmn2r70	UTSW	7	85559579	missense	probably damaging	1.00
R4535:Vmn2r70	UTSW	7	85565333	missense	probably damaging	1.00
R5181:Vmn2r70	UTSW	7	85559179	missense	probably damaging	0.99
R5600:Vmn2r70	UTSW	7	85563727	missense	probably benign	0.07
R5641:Vmn2r70	UTSW	7	85559364	missense	probably damaging	0.99
R5726:Vmn2r70	UTSW	7	85559107	missense	probably damaging	1.00
R5943:Vmn2r70	UTSW	7	85565991	missense	probably benign	0.09
R6166:Vmn2r70	UTSW	7	85565981	missense	probably benign	0.25
R6272:Vmn2r70	UTSW	7	85558986	missense	probably damaging	1.00
R6324:Vmn2r70	UTSW	7	85558879	missense	probably benign	0.01
R6429:Vmn2r70	UTSW	7	85559068	missense	probably damaging	1.00
R6449:Vmn2r70	UTSW	7	85564949	missense	probably damaging	1.00
R6512:Vmn2r70	UTSW	7	85566097	missense	probably benign
R7000:Vmn2r70	UTSW	7	85559611	missense	probably damaging	0.99
R7141:Vmn2r70	UTSW	7	85558836	missense	probably benign
R7153:Vmn2r70	UTSW	7	85565054	missense	probably damaging	1.00
R7424:Vmn2r70	UTSW	7	85563868	missense	probably damaging	1.00
R7565:Vmn2r70	UTSW	7	85565291	missense	probably benign	0.35
R7567:Vmn2r70	UTSW	7	85565035	missense	probably benign	0.41
R7593:Vmn2r70	UTSW	7	85566104	nonsense	probably null
R7806:Vmn2r70	UTSW	7	85559193	missense	probably benign
R7892:Vmn2r70	UTSW	7	85559380	missense	possibly damaging	0.58
R7965:Vmn2r70	UTSW	7	85561863	missense	probably damaging	0.96
R8052:Vmn2r70	UTSW	7	85563715	missense	probably benign
R8251:Vmn2r70	UTSW	7	85565978	nonsense	probably null
R8814:Vmn2r70	UTSW	7	85565961	missense	probably benign	0.00
R8934:Vmn2r70	UTSW	7	85561980	missense	possibly damaging	0.87
R9225:Vmn2r70	UTSW	7	85559034	missense	probably damaging	1.00
R9322:Vmn2r70	UTSW	7	85559290	missense	possibly damaging	0.92
R9430:Vmn2r70	UTSW	7	85566032	missense	probably benign	0.10
R9477:Vmn2r70	UTSW	7	85569036	missense	possibly damaging	0.50
Z1088:Vmn2r70	UTSW	7	85564760	missense	possibly damaging	0.53
Z1176:Vmn2r70	UTSW	7	85569045	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- GGGTCATTCATTCAGCATTGAC -3'
(R):5'- AGGCAGATATCTTGCTGACAGG -3'

Sequencing Primer
(F):5'- AGGTACTCATAAAACAACCAGAATTG -3'
(R):5'- TGCTGACAGGAAAAAGATGTTCTCC -3'

Posted On

2019-11-12