Incidental Mutation 'R7667:Vmn2r120'
ID |
592015 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r120
|
Ensembl Gene |
ENSMUSG00000090655 |
Gene Name |
vomeronasal 2, receptor 120 |
Synonyms |
EG224916 |
MMRRC Submission |
045740-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.079)
|
Stock # |
R7667 (G1)
|
Quality Score |
140.008 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
57815783-57852314 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 57843657 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Serine
at position 62
(R62S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000129296
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000165781]
|
AlphaFold |
A0A3Q4EG79 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000165781
AA Change: R62S
PolyPhen 2
Score 0.044 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000129296 Gene: ENSMUSG00000090655 AA Change: R62S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
80 |
474 |
5.9e-42 |
PFAM |
Pfam:NCD3G
|
517 |
570 |
7.5e-22 |
PFAM |
Pfam:7tm_3
|
598 |
836 |
1.3e-54 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 99.0%
|
Validation Efficiency |
100% (58/58) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 58 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam17 |
A |
T |
12: 21,383,953 (GRCm39) |
|
probably null |
Het |
Adgrf5 |
A |
C |
17: 43,756,930 (GRCm39) |
I675L |
probably benign |
Het |
Arhgap24 |
T |
A |
5: 103,026,323 (GRCm39) |
M248K |
probably benign |
Het |
Chl1 |
G |
A |
6: 103,672,456 (GRCm39) |
D566N |
possibly damaging |
Het |
Cntn4 |
A |
T |
6: 106,656,856 (GRCm39) |
I908F |
possibly damaging |
Het |
Cyld |
T |
C |
8: 89,468,930 (GRCm39) |
I752T |
probably benign |
Het |
Cyp26a1 |
C |
A |
19: 37,689,072 (GRCm39) |
L336I |
possibly damaging |
Het |
Dlg2 |
A |
G |
7: 92,087,364 (GRCm39) |
|
probably null |
Het |
Dmkn |
G |
A |
7: 30,477,034 (GRCm39) |
G446D |
probably damaging |
Het |
Dnajc25 |
T |
C |
4: 59,020,356 (GRCm39) |
Y260H |
probably damaging |
Het |
Dnm3 |
C |
A |
1: 161,839,399 (GRCm39) |
R186L |
probably damaging |
Het |
Dst |
C |
T |
1: 34,218,116 (GRCm39) |
H1519Y |
possibly damaging |
Het |
Efcab3 |
C |
T |
11: 104,642,737 (GRCm39) |
T1120I |
possibly damaging |
Het |
Eif1ad |
A |
G |
19: 5,418,243 (GRCm39) |
H9R |
probably damaging |
Het |
Epha3 |
A |
T |
16: 63,386,963 (GRCm39) |
I891N |
probably benign |
Het |
Epx |
T |
C |
11: 87,765,137 (GRCm39) |
T187A |
probably damaging |
Het |
Fbln2 |
T |
G |
6: 91,210,649 (GRCm39) |
Y198D |
probably damaging |
Het |
Fhod3 |
A |
G |
18: 25,135,001 (GRCm39) |
I371V |
probably benign |
Het |
Gm4922 |
C |
T |
10: 18,660,096 (GRCm39) |
V209I |
probably damaging |
Het |
Gucy1a2 |
G |
A |
9: 3,759,580 (GRCm39) |
G462D |
probably damaging |
Het |
Gzmd |
T |
C |
14: 56,368,709 (GRCm39) |
T62A |
probably damaging |
Het |
Hnrnpul1 |
A |
T |
7: 25,453,846 (GRCm39) |
L72Q |
probably damaging |
Het |
Ifi211 |
A |
T |
1: 173,727,020 (GRCm39) |
W375R |
probably damaging |
Het |
Il1rl2 |
C |
A |
1: 40,404,413 (GRCm39) |
H511Q |
probably damaging |
Het |
Kcnn2 |
A |
T |
18: 45,692,505 (GRCm39) |
H27L |
possibly damaging |
Het |
Kng2 |
A |
G |
16: 22,806,982 (GRCm39) |
Y406H |
probably damaging |
Het |
Lama1 |
A |
G |
17: 68,087,592 (GRCm39) |
E1491G |
|
Het |
Lmf1 |
T |
C |
17: 25,873,582 (GRCm39) |
|
probably null |
Het |
Med24 |
T |
C |
11: 98,603,990 (GRCm39) |
N417S |
possibly damaging |
Het |
Mfsd4b5 |
T |
C |
10: 39,850,796 (GRCm39) |
E60G |
probably benign |
Het |
Myo7b |
A |
G |
18: 32,094,958 (GRCm39) |
V1879A |
probably benign |
Het |
Myrfl |
T |
A |
10: 116,675,258 (GRCm39) |
N225I |
possibly damaging |
Het |
Naaladl2 |
A |
C |
3: 24,467,512 (GRCm39) |
|
probably null |
Het |
Ndrg1 |
C |
T |
15: 66,820,243 (GRCm39) |
D64N |
probably damaging |
Het |
Or6c33 |
T |
C |
10: 129,853,403 (GRCm39) |
Y58H |
probably damaging |
Het |
Or8j3b |
A |
G |
2: 86,205,525 (GRCm39) |
I77T |
probably damaging |
Het |
Rasa3 |
A |
C |
8: 13,638,015 (GRCm39) |
L343R |
probably benign |
Het |
Ros1 |
T |
G |
10: 52,040,067 (GRCm39) |
K308T |
probably damaging |
Het |
Rp1l1 |
A |
G |
14: 64,267,252 (GRCm39) |
Y946C |
probably benign |
Het |
Rpl13a |
A |
T |
7: 44,775,597 (GRCm39) |
L156Q |
probably damaging |
Het |
Samd9l |
A |
G |
6: 3,375,975 (GRCm39) |
F429L |
possibly damaging |
Het |
Slc25a25 |
A |
G |
2: 32,341,221 (GRCm39) |
V39A |
probably benign |
Het |
Snrnp27 |
A |
T |
6: 86,657,935 (GRCm39) |
I101K |
possibly damaging |
Het |
Sspo |
G |
A |
6: 48,452,305 (GRCm39) |
W2756* |
probably null |
Het |
Sult6b2 |
T |
A |
6: 142,732,085 (GRCm39) |
N274I |
probably benign |
Het |
Tbc1d14 |
G |
A |
5: 36,652,382 (GRCm39) |
R667W |
probably damaging |
Het |
Tg |
T |
C |
15: 66,587,012 (GRCm39) |
S1597P |
probably damaging |
Het |
Thy1 |
A |
G |
9: 43,958,732 (GRCm39) |
D158G |
probably damaging |
Het |
Tns4 |
T |
C |
11: 98,962,296 (GRCm39) |
Y567C |
probably damaging |
Het |
Vmn1r170 |
A |
G |
7: 23,306,473 (GRCm39) |
R292G |
probably damaging |
Het |
Vmn2r88 |
T |
G |
14: 51,655,446 (GRCm39) |
C552G |
|
Het |
Xpo4 |
T |
A |
14: 57,827,416 (GRCm39) |
I927F |
probably damaging |
Het |
Zc3h7a |
A |
T |
16: 10,956,890 (GRCm39) |
C906* |
probably null |
Het |
Zdhhc22 |
T |
C |
12: 87,030,162 (GRCm39) |
D262G |
probably benign |
Het |
Zfc3h1 |
C |
T |
10: 115,246,606 (GRCm39) |
Q898* |
probably null |
Het |
Zfp280d |
T |
A |
9: 72,209,247 (GRCm39) |
S126T |
probably damaging |
Het |
Zfp652 |
G |
T |
11: 95,640,544 (GRCm39) |
E156D |
probably benign |
Het |
Zfp74 |
T |
C |
7: 29,634,608 (GRCm39) |
R367G |
probably damaging |
Het |
|
Other mutations in Vmn2r120 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01335:Vmn2r120
|
APN |
17 |
57,832,732 (GRCm39) |
missense |
possibly damaging |
0.86 |
IGL01346:Vmn2r120
|
APN |
17 |
57,852,232 (GRCm39) |
missense |
probably benign |
0.11 |
IGL01996:Vmn2r120
|
APN |
17 |
57,832,222 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL02503:Vmn2r120
|
APN |
17 |
57,816,385 (GRCm39) |
missense |
probably benign |
0.40 |
IGL02582:Vmn2r120
|
APN |
17 |
57,831,724 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02747:Vmn2r120
|
APN |
17 |
57,831,719 (GRCm39) |
missense |
probably benign |
0.19 |
IGL02896:Vmn2r120
|
APN |
17 |
57,816,008 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03139:Vmn2r120
|
APN |
17 |
57,831,742 (GRCm39) |
missense |
probably benign |
0.39 |
IGL03342:Vmn2r120
|
APN |
17 |
57,816,372 (GRCm39) |
missense |
probably benign |
0.03 |
A4554:Vmn2r120
|
UTSW |
17 |
57,832,715 (GRCm39) |
missense |
probably benign |
0.01 |
R0207:Vmn2r120
|
UTSW |
17 |
57,832,052 (GRCm39) |
missense |
probably benign |
0.17 |
R0472:Vmn2r120
|
UTSW |
17 |
57,831,518 (GRCm39) |
missense |
probably benign |
0.03 |
R0517:Vmn2r120
|
UTSW |
17 |
57,815,949 (GRCm39) |
missense |
probably damaging |
1.00 |
R1109:Vmn2r120
|
UTSW |
17 |
57,832,829 (GRCm39) |
missense |
probably benign |
0.09 |
R1316:Vmn2r120
|
UTSW |
17 |
57,832,939 (GRCm39) |
missense |
probably benign |
0.28 |
R1543:Vmn2r120
|
UTSW |
17 |
57,829,374 (GRCm39) |
missense |
probably benign |
0.09 |
R1795:Vmn2r120
|
UTSW |
17 |
57,832,038 (GRCm39) |
missense |
probably benign |
0.35 |
R1850:Vmn2r120
|
UTSW |
17 |
57,832,826 (GRCm39) |
missense |
probably benign |
0.19 |
R1920:Vmn2r120
|
UTSW |
17 |
57,831,839 (GRCm39) |
missense |
probably benign |
0.01 |
R1921:Vmn2r120
|
UTSW |
17 |
57,831,839 (GRCm39) |
missense |
probably benign |
0.01 |
R1922:Vmn2r120
|
UTSW |
17 |
57,831,839 (GRCm39) |
missense |
probably benign |
0.01 |
R2063:Vmn2r120
|
UTSW |
17 |
57,831,553 (GRCm39) |
missense |
possibly damaging |
0.88 |
R2064:Vmn2r120
|
UTSW |
17 |
57,831,553 (GRCm39) |
missense |
possibly damaging |
0.88 |
R2065:Vmn2r120
|
UTSW |
17 |
57,831,553 (GRCm39) |
missense |
possibly damaging |
0.88 |
R2067:Vmn2r120
|
UTSW |
17 |
57,831,553 (GRCm39) |
missense |
possibly damaging |
0.88 |
R2286:Vmn2r120
|
UTSW |
17 |
57,815,958 (GRCm39) |
missense |
probably damaging |
1.00 |
R2291:Vmn2r120
|
UTSW |
17 |
57,816,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R3416:Vmn2r120
|
UTSW |
17 |
57,816,241 (GRCm39) |
missense |
possibly damaging |
0.89 |
R3874:Vmn2r120
|
UTSW |
17 |
57,831,954 (GRCm39) |
missense |
probably benign |
0.40 |
R4023:Vmn2r120
|
UTSW |
17 |
57,843,718 (GRCm39) |
missense |
possibly damaging |
0.92 |
R4024:Vmn2r120
|
UTSW |
17 |
57,843,718 (GRCm39) |
missense |
possibly damaging |
0.92 |
R4348:Vmn2r120
|
UTSW |
17 |
57,829,466 (GRCm39) |
missense |
possibly damaging |
0.47 |
R4409:Vmn2r120
|
UTSW |
17 |
57,816,477 (GRCm39) |
missense |
probably damaging |
1.00 |
R4610:Vmn2r120
|
UTSW |
17 |
57,816,120 (GRCm39) |
missense |
probably damaging |
1.00 |
R4771:Vmn2r120
|
UTSW |
17 |
57,831,887 (GRCm39) |
missense |
probably damaging |
1.00 |
R4786:Vmn2r120
|
UTSW |
17 |
57,829,048 (GRCm39) |
missense |
probably benign |
0.14 |
R4927:Vmn2r120
|
UTSW |
17 |
57,816,125 (GRCm39) |
missense |
probably damaging |
1.00 |
R5285:Vmn2r120
|
UTSW |
17 |
57,843,703 (GRCm39) |
missense |
probably damaging |
1.00 |
R5566:Vmn2r120
|
UTSW |
17 |
57,852,290 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5578:Vmn2r120
|
UTSW |
17 |
57,829,514 (GRCm39) |
missense |
probably benign |
0.01 |
R5643:Vmn2r120
|
UTSW |
17 |
57,831,977 (GRCm39) |
missense |
probably benign |
0.01 |
R5644:Vmn2r120
|
UTSW |
17 |
57,831,977 (GRCm39) |
missense |
probably benign |
0.01 |
R5781:Vmn2r120
|
UTSW |
17 |
57,831,938 (GRCm39) |
missense |
probably benign |
0.00 |
R6084:Vmn2r120
|
UTSW |
17 |
57,832,721 (GRCm39) |
missense |
probably benign |
0.15 |
R6120:Vmn2r120
|
UTSW |
17 |
57,832,973 (GRCm39) |
missense |
probably benign |
0.02 |
R6160:Vmn2r120
|
UTSW |
17 |
57,816,418 (GRCm39) |
missense |
probably benign |
0.03 |
R6248:Vmn2r120
|
UTSW |
17 |
57,852,287 (GRCm39) |
missense |
probably benign |
0.03 |
R6256:Vmn2r120
|
UTSW |
17 |
57,831,700 (GRCm39) |
nonsense |
probably null |
|
R6730:Vmn2r120
|
UTSW |
17 |
57,832,012 (GRCm39) |
missense |
probably benign |
0.03 |
R6821:Vmn2r120
|
UTSW |
17 |
57,843,659 (GRCm39) |
missense |
probably benign |
0.00 |
R6868:Vmn2r120
|
UTSW |
17 |
57,852,218 (GRCm39) |
missense |
probably benign |
0.00 |
R6880:Vmn2r120
|
UTSW |
17 |
57,816,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R6986:Vmn2r120
|
UTSW |
17 |
57,816,340 (GRCm39) |
missense |
probably damaging |
1.00 |
R7276:Vmn2r120
|
UTSW |
17 |
57,831,881 (GRCm39) |
missense |
probably benign |
0.11 |
R7373:Vmn2r120
|
UTSW |
17 |
57,816,406 (GRCm39) |
missense |
probably benign |
0.35 |
R7653:Vmn2r120
|
UTSW |
17 |
57,816,258 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7775:Vmn2r120
|
UTSW |
17 |
57,832,942 (GRCm39) |
missense |
probably damaging |
1.00 |
R7778:Vmn2r120
|
UTSW |
17 |
57,832,942 (GRCm39) |
missense |
probably damaging |
1.00 |
R7797:Vmn2r120
|
UTSW |
17 |
57,815,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R7824:Vmn2r120
|
UTSW |
17 |
57,832,942 (GRCm39) |
missense |
probably damaging |
1.00 |
R7902:Vmn2r120
|
UTSW |
17 |
57,816,244 (GRCm39) |
missense |
possibly damaging |
0.87 |
R7922:Vmn2r120
|
UTSW |
17 |
57,831,683 (GRCm39) |
missense |
probably damaging |
0.99 |
R8508:Vmn2r120
|
UTSW |
17 |
57,832,843 (GRCm39) |
missense |
probably benign |
0.03 |
R8847:Vmn2r120
|
UTSW |
17 |
57,816,217 (GRCm39) |
missense |
probably benign |
0.01 |
R8882:Vmn2r120
|
UTSW |
17 |
57,852,229 (GRCm39) |
missense |
probably benign |
0.01 |
R9134:Vmn2r120
|
UTSW |
17 |
57,832,093 (GRCm39) |
missense |
probably damaging |
1.00 |
R9161:Vmn2r120
|
UTSW |
17 |
57,831,864 (GRCm39) |
missense |
|
|
R9336:Vmn2r120
|
UTSW |
17 |
57,832,201 (GRCm39) |
missense |
possibly damaging |
0.91 |
RF005:Vmn2r120
|
UTSW |
17 |
57,828,991 (GRCm39) |
missense |
possibly damaging |
0.65 |
Z1177:Vmn2r120
|
UTSW |
17 |
57,816,245 (GRCm39) |
missense |
probably benign |
0.00 |
Z1188:Vmn2r120
|
UTSW |
17 |
57,829,436 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGCAAATTGATCCATTCTTACCTC -3'
(R):5'- TCCCACCAGCAATGGAGGAG -3'
Sequencing Primer
(F):5'- CTCCTTGTACAAAGCTCAAGTCGATG -3'
(R):5'- CCAGCAATGGAGGAGTGTTCC -3'
|
Posted On |
2019-11-12 |