Mutagenetix > Incidental Mutation

Incidental Mutation 'R7704:Unc13c'

594189

Institutional Source

Beutler Lab

Gene Symbol

Unc13c

Ensembl Gene

ENSMUSG00000062151

Gene Name

unc-13 homolog C

Synonyms

D9Ertd414e, 1500037O19Rik, Munc13-3, Unc13h3

MMRRC Submission

045765-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7704 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

73386704-73876248 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 73606494 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Phenylalanine at position 1289 (I1289F)

Ref Sequence

ENSEMBL: ENSMUSP00000074726 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000075245] [ENSMUST00000184666]

AlphaFold

Q8K0T7

Predicted Effect

probably benign
Transcript: ENSMUST00000075245
AA Change: I1289F

PolyPhen 2 Score 0.272 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000074726
Gene: ENSMUSG00000062151
AA Change: I1289F

Domain	Start	End	E-Value	Type
low complexity region	109	127	N/A	INTRINSIC
low complexity region	153	164	N/A	INTRINSIC
low complexity region	273	287	N/A	INTRINSIC
low complexity region	464	491	N/A	INTRINSIC
low complexity region	678	694	N/A	INTRINSIC
C1	1094	1143	1.37e-17	SMART
C2	1217	1324	1.46e-22	SMART
DUF1041	1535	1642	3.18e-51	SMART
Blast:DUF1041	1714	1838	2e-49	BLAST
Pfam:Membr_traf_MHD	1883	2023	2.6e-50	PFAM
C2	2058	2164	4.15e-13	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000184666
AA Change: I1289F

PolyPhen 2 Score 0.272 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000139027
Gene: ENSMUSG00000062151
AA Change: I1289F

Domain	Start	End	E-Value	Type
low complexity region	109	127	N/A	INTRINSIC
low complexity region	153	164	N/A	INTRINSIC
low complexity region	273	287	N/A	INTRINSIC
low complexity region	464	491	N/A	INTRINSIC
low complexity region	678	694	N/A	INTRINSIC
C1	1094	1143	1.37e-17	SMART
C2	1217	1324	1.46e-22	SMART
DUF1041	1535	1642	3.18e-51	SMART
Blast:DUF1041	1714	1838	2e-49	BLAST
Pfam:Membr_traf_MHD	1882	2024	8.3e-59	PFAM
C2	2058	2164	4.15e-13	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygous mutant mice demonstrate an impaired ability to learn complex motor tasks, putatively due to an observed increase in paired-pulse facilitation. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc8	C	A	7: 45,756,068 (GRCm39)	W1458L	probably damaging	Het
Actn4	A	T	7: 28,596,467 (GRCm39)	I676N	possibly damaging	Het
Adamts10	T	C	17: 33,770,126 (GRCm39)	C1002R	probably damaging	Het
Agbl2	A	C	2: 90,619,349 (GRCm39)	N58T	probably benign	Het
Akap12	A	T	10: 4,306,082 (GRCm39)	D1069V	probably damaging	Het
Bltp2	C	A	11: 78,159,570 (GRCm39)	Q540K	probably benign	Het
Cfap65	T	A	1: 74,967,527 (GRCm39)	T184S	probably benign	Het
Chd1	T	C	17: 15,987,737 (GRCm39)	V1517A	probably benign	Het
CN725425	T	A	15: 91,119,993 (GRCm39)	V38D	possibly damaging	Het
Copg1	T	A	6: 87,884,940 (GRCm39)	L712Q	probably benign	Het
Ctsf	T	G	19: 4,906,567 (GRCm39)	F165V	probably damaging	Het
Ddx21	T	C	10: 62,429,865 (GRCm39)	Y293C	probably damaging	Het
Ddx46	C	T	13: 55,821,832 (GRCm39)	P839S	probably benign	Het
Dennd5a	A	G	7: 109,496,174 (GRCm39)	V1164A	possibly damaging	Het
Dync1h1	T	A	12: 110,632,200 (GRCm39)	I4490N	probably damaging	Het
Ecm1	A	C	3: 95,643,843 (GRCm39)	Y236D	probably damaging	Het
Fat2	T	C	11: 55,175,173 (GRCm39)	T1847A	probably benign	Het
Galc	T	A	12: 98,175,102 (GRCm39)	I567L	probably benign	Het
Gask1a	C	T	9: 121,780,151 (GRCm39)		probably benign	Het
H6pd	T	C	4: 150,067,360 (GRCm39)	D350G	probably benign	Het
Ifi44	A	G	3: 151,438,061 (GRCm39)	Y409H	probably benign	Het
Kdm5a	T	G	6: 120,404,025 (GRCm39)	F1210C	probably damaging	Het
Kdm5b	C	T	1: 134,515,669 (GRCm39)	R98C	probably damaging	Het
Lipt1	T	A	1: 37,915,043 (GRCm39)	C366*	probably null	Het
Med13	G	A	11: 86,236,744 (GRCm39)	R138*	probably null	Het
Mterf1a	A	G	5: 3,941,845 (GRCm39)	C8R	probably benign	Het
Ncapg2	A	T	12: 116,382,897 (GRCm39)	I243F	probably damaging	Het
Nop58	T	C	1: 59,744,754 (GRCm39)	S304P	probably damaging	Het
Nsd2	T	C	5: 34,028,811 (GRCm39)	*167Q	probably null	Het
Or1e30	T	G	11: 73,678,616 (GRCm39)	M284R	probably damaging	Het
Or2t35	T	A	14: 14,407,867 (GRCm38)	I213N	probably damaging	Het
Or52ab2	T	A	7: 102,969,978 (GRCm39)	M120K		Het
Pramel29	C	T	4: 143,935,091 (GRCm39)	V217I	possibly damaging	Het
Prdm16	C	T	4: 154,425,947 (GRCm39)	G613R	probably damaging	Het
Prss46	T	C	9: 110,679,065 (GRCm39)	S89P	probably damaging	Het
Scin	T	C	12: 40,174,687 (GRCm39)	N132S	possibly damaging	Het
Sec14l2	T	C	11: 4,058,574 (GRCm39)	K196R	probably benign	Het
Sox17	C	A	1: 4,563,895 (GRCm39)		probably benign	Het
Tango6	A	G	8: 107,425,621 (GRCm39)	T394A	probably benign	Het
Tbc1d22a	T	A	15: 86,250,876 (GRCm39)	I398N	probably damaging	Het
Tdpoz8	A	G	3: 92,981,752 (GRCm39)	I183V	probably benign	Het
Tmem8b	T	C	4: 43,689,461 (GRCm39)	V285A	probably damaging	Het
Tnfrsf11b	T	A	15: 54,123,497 (GRCm39)	T35S	probably benign	Het
Ust	C	T	10: 8,205,987 (GRCm39)	V99I	probably benign	Het
Vmn1r76	A	G	7: 11,664,344 (GRCm39)	V290A	probably benign	Het
Vmn2r50	T	C	7: 9,781,665 (GRCm39)	N360S	probably benign	Het
Vmn2r93	T	C	17: 18,536,910 (GRCm39)	I531T	probably benign	Het
Zap70	T	C	1: 36,818,395 (GRCm39)		probably null	Het
Zfp932	A	G	5: 110,157,630 (GRCm39)	N443D	probably benign	Het

Other mutations in Unc13c

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00420:Unc13c	APN	9	73,643,985 (GRCm39)	missense	probably damaging	0.99
IGL00693:Unc13c	APN	9	73,665,884 (GRCm39)	missense	probably benign	0.18
IGL01022:Unc13c	APN	9	73,424,610 (GRCm39)	missense	probably benign	0.06
IGL01088:Unc13c	APN	9	73,839,563 (GRCm39)	missense	possibly damaging	0.63
IGL01123:Unc13c	APN	9	73,840,479 (GRCm39)	missense	probably benign	0.05
IGL01131:Unc13c	APN	9	73,471,335 (GRCm39)	missense	probably benign
IGL01135:Unc13c	APN	9	73,392,175 (GRCm39)	missense	probably damaging	1.00
IGL01393:Unc13c	APN	9	73,447,552 (GRCm39)	missense	probably benign	0.06
IGL01752:Unc13c	APN	9	73,839,093 (GRCm39)	missense	probably benign	0.01
IGL01893:Unc13c	APN	9	73,600,648 (GRCm39)	missense	probably benign	0.15
IGL01897:Unc13c	APN	9	73,453,309 (GRCm39)	missense	probably damaging	0.99
IGL01936:Unc13c	APN	9	73,600,524 (GRCm39)	missense	probably benign	0.07
IGL02122:Unc13c	APN	9	73,641,679 (GRCm39)	splice site	probably benign
IGL02341:Unc13c	APN	9	73,840,492 (GRCm39)	missense	possibly damaging	0.76
IGL02434:Unc13c	APN	9	73,839,910 (GRCm39)	missense	probably benign	0.01
IGL02545:Unc13c	APN	9	73,388,357 (GRCm39)	missense	probably damaging	0.98
IGL02709:Unc13c	APN	9	73,466,238 (GRCm39)	missense	probably benign	0.00
IGL02815:Unc13c	APN	9	73,447,545 (GRCm39)	missense	possibly damaging	0.83
IGL02904:Unc13c	APN	9	73,388,349 (GRCm39)	nonsense	probably null
IGL03117:Unc13c	APN	9	73,441,307 (GRCm39)	missense	probably benign	0.03
IGL03260:Unc13c	APN	9	73,838,626 (GRCm39)	missense	probably benign	0.11
Feeling	UTSW	9	73,600,553 (GRCm39)	missense	possibly damaging	0.46
Inkling	UTSW	9	73,839,126 (GRCm39)	missense	probably damaging	1.00
notion	UTSW	9	73,643,844 (GRCm39)	missense	probably damaging	1.00
BB001:Unc13c	UTSW	9	73,641,690 (GRCm39)	missense	probably benign	0.05
BB011:Unc13c	UTSW	9	73,641,690 (GRCm39)	missense	probably benign	0.05
PIT4431001:Unc13c	UTSW	9	73,656,829 (GRCm39)	missense	probably damaging	0.99
PIT4651001:Unc13c	UTSW	9	73,391,021 (GRCm39)	missense	possibly damaging	0.48
R0017:Unc13c	UTSW	9	73,600,583 (GRCm39)	missense	probably benign	0.07
R0039:Unc13c	UTSW	9	73,576,847 (GRCm39)	splice site	probably benign
R0164:Unc13c	UTSW	9	73,602,174 (GRCm39)	missense	probably benign	0.01
R0164:Unc13c	UTSW	9	73,602,174 (GRCm39)	missense	probably benign	0.01
R0308:Unc13c	UTSW	9	73,388,400 (GRCm39)	missense	probably benign	0.04
R0344:Unc13c	UTSW	9	73,838,067 (GRCm39)	missense	probably benign	0.39
R0421:Unc13c	UTSW	9	73,840,492 (GRCm39)	missense	possibly damaging	0.76
R0606:Unc13c	UTSW	9	73,438,265 (GRCm39)	splice site	probably benign
R0655:Unc13c	UTSW	9	73,838,235 (GRCm39)	missense	probably damaging	0.96
R1013:Unc13c	UTSW	9	73,840,614 (GRCm39)	missense	probably benign	0.45
R1293:Unc13c	UTSW	9	73,481,356 (GRCm39)	missense	probably benign	0.06
R1493:Unc13c	UTSW	9	73,546,350 (GRCm39)	missense	probably benign	0.27
R1675:Unc13c	UTSW	9	73,546,332 (GRCm39)	critical splice donor site	probably null
R1789:Unc13c	UTSW	9	73,663,621 (GRCm39)	missense	possibly damaging	0.92
R2001:Unc13c	UTSW	9	73,390,897 (GRCm39)	splice site	probably null
R2055:Unc13c	UTSW	9	73,643,832 (GRCm39)	missense	probably damaging	1.00
R2060:Unc13c	UTSW	9	73,572,938 (GRCm39)	missense	probably damaging	0.99
R2420:Unc13c	UTSW	9	73,838,829 (GRCm39)	missense	probably damaging	0.97
R2421:Unc13c	UTSW	9	73,838,829 (GRCm39)	missense	probably damaging	0.97
R2422:Unc13c	UTSW	9	73,838,829 (GRCm39)	missense	probably damaging	0.97
R3415:Unc13c	UTSW	9	73,839,868 (GRCm39)	missense	probably benign	0.00
R3423:Unc13c	UTSW	9	73,837,935 (GRCm39)	missense	possibly damaging	0.46
R3820:Unc13c	UTSW	9	73,838,240 (GRCm39)	missense	probably benign	0.00
R3857:Unc13c	UTSW	9	73,606,390 (GRCm39)	nonsense	probably null
R3859:Unc13c	UTSW	9	73,606,390 (GRCm39)	nonsense	probably null
R3895:Unc13c	UTSW	9	73,840,805 (GRCm39)	missense	probably benign
R4038:Unc13c	UTSW	9	73,441,188 (GRCm39)	critical splice donor site	probably null
R4077:Unc13c	UTSW	9	73,643,821 (GRCm39)	nonsense	probably null
R4125:Unc13c	UTSW	9	73,481,289 (GRCm39)	critical splice donor site	probably null
R4128:Unc13c	UTSW	9	73,641,819 (GRCm39)	missense	probably damaging	1.00
R4235:Unc13c	UTSW	9	73,438,234 (GRCm39)	missense	possibly damaging	0.68
R4295:Unc13c	UTSW	9	73,641,786 (GRCm39)	missense	probably damaging	1.00
R4307:Unc13c	UTSW	9	73,600,649 (GRCm39)	missense	probably benign	0.06
R4658:Unc13c	UTSW	9	73,840,108 (GRCm39)	missense	probably damaging	1.00
R4694:Unc13c	UTSW	9	73,479,636 (GRCm39)	missense	probably benign	0.00
R4735:Unc13c	UTSW	9	73,600,620 (GRCm39)	missense	probably benign	0.00
R4744:Unc13c	UTSW	9	73,839,126 (GRCm39)	missense	probably damaging	1.00
R4795:Unc13c	UTSW	9	73,839,469 (GRCm39)	missense	probably damaging	0.97
R4827:Unc13c	UTSW	9	73,838,568 (GRCm39)	missense	probably damaging	1.00
R4838:Unc13c	UTSW	9	73,839,354 (GRCm39)	missense	possibly damaging	0.68
R4869:Unc13c	UTSW	9	73,587,716 (GRCm39)	missense	probably benign	0.02
R4873:Unc13c	UTSW	9	73,424,566 (GRCm39)	missense	probably damaging	0.98
R4875:Unc13c	UTSW	9	73,424,566 (GRCm39)	missense	probably damaging	0.98
R4876:Unc13c	UTSW	9	73,656,821 (GRCm39)	missense	probably damaging	1.00
R4905:Unc13c	UTSW	9	73,587,674 (GRCm39)	missense	probably benign
R4912:Unc13c	UTSW	9	73,481,304 (GRCm39)	missense	probably damaging	0.99
R5026:Unc13c	UTSW	9	73,838,185 (GRCm39)	missense	possibly damaging	0.74
R5127:Unc13c	UTSW	9	73,840,654 (GRCm39)	missense	probably benign	0.26
R5151:Unc13c	UTSW	9	73,838,757 (GRCm39)	missense	probably benign	0.02
R5171:Unc13c	UTSW	9	73,665,236 (GRCm39)	missense	probably benign
R5244:Unc13c	UTSW	9	73,433,233 (GRCm39)	critical splice donor site	probably null
R5342:Unc13c	UTSW	9	73,838,105 (GRCm39)	missense	probably benign	0.00
R5399:Unc13c	UTSW	9	73,656,970 (GRCm39)	missense	possibly damaging	0.95
R5409:Unc13c	UTSW	9	73,485,672 (GRCm39)	missense	possibly damaging	0.78
R5460:Unc13c	UTSW	9	73,453,271 (GRCm39)	missense	probably benign
R5680:Unc13c	UTSW	9	73,839,884 (GRCm39)	missense	probably damaging	1.00
R5681:Unc13c	UTSW	9	73,453,357 (GRCm39)	splice site	probably null
R5728:Unc13c	UTSW	9	73,466,238 (GRCm39)	missense	probably benign	0.01
R5762:Unc13c	UTSW	9	73,719,649 (GRCm39)	missense	probably benign	0.00
R5764:Unc13c	UTSW	9	73,441,185 (GRCm39)	splice site	probably null
R5829:Unc13c	UTSW	9	73,600,650 (GRCm39)	missense	probably benign	0.15
R5894:Unc13c	UTSW	9	73,600,486 (GRCm39)	critical splice donor site	probably null
R5936:Unc13c	UTSW	9	73,485,774 (GRCm39)	missense	probably damaging	1.00
R6043:Unc13c	UTSW	9	73,643,933 (GRCm39)	missense	possibly damaging	0.88
R6046:Unc13c	UTSW	9	73,838,166 (GRCm39)	missense	probably benign
R6148:Unc13c	UTSW	9	73,600,648 (GRCm39)	missense	probably benign	0.15
R6207:Unc13c	UTSW	9	73,665,910 (GRCm39)	missense	possibly damaging	0.89
R6277:Unc13c	UTSW	9	73,606,451 (GRCm39)	missense	probably damaging	1.00
R6338:Unc13c	UTSW	9	73,641,729 (GRCm39)	missense	probably damaging	0.99
R6615:Unc13c	UTSW	9	73,837,890 (GRCm39)	missense	possibly damaging	0.63
R6978:Unc13c	UTSW	9	73,839,259 (GRCm39)	missense	probably benign	0.39
R7053:Unc13c	UTSW	9	73,839,579 (GRCm39)	missense	probably damaging	1.00
R7223:Unc13c	UTSW	9	73,536,473 (GRCm39)	missense	probably benign	0.44
R7259:Unc13c	UTSW	9	73,424,645 (GRCm39)	missense	probably benign	0.00
R7353:Unc13c	UTSW	9	73,481,355 (GRCm39)	missense	probably benign	0.00
R7357:Unc13c	UTSW	9	73,840,811 (GRCm39)	small insertion	probably benign
R7357:Unc13c	UTSW	9	73,840,810 (GRCm39)	small insertion	probably benign
R7607:Unc13c	UTSW	9	73,576,817 (GRCm39)	missense	probably damaging	0.98
R7626:Unc13c	UTSW	9	73,641,799 (GRCm39)	missense	probably damaging	1.00
R7639:Unc13c	UTSW	9	73,840,450 (GRCm39)	missense	probably damaging	0.99
R7657:Unc13c	UTSW	9	73,441,185 (GRCm39)	splice site	probably null
R7665:Unc13c	UTSW	9	73,587,756 (GRCm39)	missense	probably benign	0.28
R7776:Unc13c	UTSW	9	73,602,232 (GRCm39)	missense	probably damaging	1.00
R7811:Unc13c	UTSW	9	73,600,553 (GRCm39)	missense	possibly damaging	0.46
R7833:Unc13c	UTSW	9	73,388,391 (GRCm39)	missense	possibly damaging	0.53
R7839:Unc13c	UTSW	9	73,840,596 (GRCm39)	missense	possibly damaging	0.63
R7869:Unc13c	UTSW	9	73,602,159 (GRCm39)	missense	probably damaging	1.00
R7924:Unc13c	UTSW	9	73,641,690 (GRCm39)	missense	probably benign	0.05
R8047:Unc13c	UTSW	9	73,719,636 (GRCm39)	nonsense	probably null
R8167:Unc13c	UTSW	9	73,643,985 (GRCm39)	missense	probably damaging	0.99
R8202:Unc13c	UTSW	9	73,643,844 (GRCm39)	missense	probably damaging	1.00
R8210:Unc13c	UTSW	9	73,392,220 (GRCm39)	missense	probably benign	0.13
R8352:Unc13c	UTSW	9	73,838,290 (GRCm39)	missense	probably damaging	0.99
R8368:Unc13c	UTSW	9	73,838,070 (GRCm39)	missense	probably benign	0.15
R8452:Unc13c	UTSW	9	73,838,290 (GRCm39)	missense	probably damaging	0.99
R8535:Unc13c	UTSW	9	73,447,653 (GRCm39)	missense	probably benign
R8677:Unc13c	UTSW	9	73,840,243 (GRCm39)	missense	probably benign	0.00
R8700:Unc13c	UTSW	9	73,479,679 (GRCm39)	missense	probably benign	0.44
R8848:Unc13c	UTSW	9	73,433,263 (GRCm39)	missense	probably benign
R8902:Unc13c	UTSW	9	73,656,830 (GRCm39)	missense	probably damaging	0.97
R8953:Unc13c	UTSW	9	73,840,044 (GRCm39)	missense	probably benign	0.00
R8961:Unc13c	UTSW	9	73,839,524 (GRCm39)	missense	probably benign	0.06
R9015:Unc13c	UTSW	9	73,453,322 (GRCm39)	missense	probably benign
R9114:Unc13c	UTSW	9	73,719,665 (GRCm39)	missense	probably benign	0.02
R9217:Unc13c	UTSW	9	73,485,715 (GRCm39)	missense	probably damaging	1.00
R9252:Unc13c	UTSW	9	73,424,553 (GRCm39)	missense	possibly damaging	0.80
R9273:Unc13c	UTSW	9	73,839,862 (GRCm39)	missense	possibly damaging	0.96
R9317:Unc13c	UTSW	9	73,447,662 (GRCm39)	missense	possibly damaging	0.88
R9412:Unc13c	UTSW	9	73,839,772 (GRCm39)	missense	probably benign
R9505:Unc13c	UTSW	9	73,838,824 (GRCm39)	missense	probably benign	0.22
R9516:Unc13c	UTSW	9	73,392,220 (GRCm39)	missense	probably damaging	0.99
R9528:Unc13c	UTSW	9	73,837,960 (GRCm39)	missense	possibly damaging	0.48
R9567:Unc13c	UTSW	9	73,536,485 (GRCm39)	missense	probably damaging	0.99
R9756:Unc13c	UTSW	9	73,839,526 (GRCm39)	missense	probably benign	0.23
R9783:Unc13c	UTSW	9	73,392,227 (GRCm39)	missense	probably benign	0.09

Predicted Primers

PCR Primer
(F):5'- TGACAATTACCCTTCATTGCTAATG -3'
(R):5'- CATGGCTGGAAGGGGAATCC -3'

Sequencing Primer
(F):5'- GTCAACAGAATGACCTGCAAAAG -3'
(R):5'- GGGGAATCCTCATTTATAACTCAATG -3'

Posted On

2019-11-12