Mutagenetix > Incidental Mutation

Incidental Mutation 'R7708:Slc10a6'

594394

Institutional Source

Beutler Lab

Gene Symbol

Slc10a6

Ensembl Gene

ENSMUSG00000029321

Gene Name

solute carrier family 10 (sodium/bile acid cotransporter family), member 6

Synonyms

8430417G17Rik

MMRRC Submission

045709-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.063) question?

Stock #

R7708 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

103753583-103777152 bp(-) (GRCm39)

Type of Mutation

start gained

DNA Base Change (assembly)

C to T at 103777128 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000031263 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031263]

AlphaFold

Q9CXB2

Predicted Effect

probably benign
Transcript: ENSMUST00000031263

SMART Domains

Protein: ENSMUSP00000031263
Gene: ENSMUSG00000029321

Domain	Start	End	E-Value	Type
Pfam:SBF	39	220	7.3e-43	PFAM
transmembrane domain	224	246	N/A	INTRINSIC
transmembrane domain	266	283	N/A	INTRINSIC
transmembrane domain	288	310	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

100% (46/46)

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl2fm3	A	G	3: 59,772,756 (GRCm39)	S87G	probably benign	Het
Adam24	A	G	8: 41,133,558 (GRCm39)	H342R	probably damaging	Het
Arhgef1	G	A	7: 24,616,306 (GRCm39)	D317N	probably damaging	Het
Asap1	T	C	15: 64,024,721 (GRCm39)	Y315C	probably damaging	Het
Atp10b	C	A	11: 43,092,970 (GRCm39)	T435K	probably damaging	Het
AW551984	A	T	9: 39,505,051 (GRCm39)	F480L	probably benign	Het
Bspry	G	T	4: 62,414,337 (GRCm39)	C310F	probably benign	Het
Camk2d	A	T	3: 126,391,089 (GRCm39)	M1L	probably benign	Het
Clock	T	A	5: 76,414,256 (GRCm39)	S19C	probably benign	Het
Cxxc1	G	T	18: 74,349,314 (GRCm39)		probably benign	Het
Efcab3	G	C	11: 104,855,397 (GRCm39)	D3816H	unknown	Het
Ercc6l2	T	A	13: 63,989,328 (GRCm39)	C176*	probably null	Het
Fkbp5	A	G	17: 28,657,071 (GRCm39)	F49L	probably benign	Het
Gm15130	T	A	2: 110,974,962 (GRCm39)	D67V		Het
Gpatch2	A	G	1: 186,964,963 (GRCm39)	I297V	probably benign	Het
Gpr135	T	G	12: 72,116,733 (GRCm39)	I345L	probably benign	Het
Gpr89	G	A	3: 96,787,941 (GRCm39)	T271I	possibly damaging	Het
Hip1r	T	A	5: 124,135,532 (GRCm39)	S503T	possibly damaging	Het
Hivep1	T	A	13: 42,317,753 (GRCm39)	C2076*	probably null	Het
Hoxa2	A	G	6: 52,141,542 (GRCm39)	V28A	probably damaging	Het
Inf2	T	C	12: 112,573,991 (GRCm39)	V765A	unknown	Het
Krt87	T	C	15: 101,385,813 (GRCm39)	M261V	probably benign	Het
Mtmr7	A	G	8: 41,043,554 (GRCm39)	Y166H	probably damaging	Het
Nuak2	T	C	1: 132,252,770 (GRCm39)	M108T	possibly damaging	Het
Or4f52	T	C	2: 111,061,863 (GRCm39)	I92V	probably damaging	Het
Or52e19	T	C	7: 102,959,768 (GRCm39)	L280P	probably damaging	Het
Or5p80	C	T	7: 108,230,048 (GRCm39)	P283L	probably damaging	Het
Or6k6	A	G	1: 173,945,300 (GRCm39)	M94T	probably damaging	Het
Or8b1c	A	T	9: 38,384,681 (GRCm39)	T213S	probably damaging	Het
Or8s16	A	T	15: 98,211,029 (GRCm39)	M134K	probably damaging	Het
Orm3	A	T	4: 63,276,050 (GRCm39)	E154V	probably damaging	Het
Pcdhga2	T	A	18: 37,804,496 (GRCm39)	I780N	possibly damaging	Het
Phf21a	T	C	2: 92,157,511 (GRCm39)		probably null	Het
Polh	G	T	17: 46,483,626 (GRCm39)	D546E	probably benign	Het
Ptprr	A	G	10: 115,998,502 (GRCm39)	D204G	probably benign	Het
Pxdn	C	T	12: 30,056,601 (GRCm39)	L1271F	probably damaging	Het
Rpl7l1	A	G	17: 47,090,271 (GRCm39)	V121A	possibly damaging	Het
Rreb1	A	G	13: 38,113,546 (GRCm39)	T302A	probably benign	Het
Scn3a	C	T	2: 65,313,512 (GRCm39)	V1134I	possibly damaging	Het
Tmprss11f	C	T	5: 86,672,028 (GRCm39)	G388D	probably damaging	Het
Tnf	A	C	17: 35,419,134 (GRCm39)	V232G	possibly damaging	Het
Trappc13	C	T	13: 104,283,845 (GRCm39)	G302D	probably benign	Het
Trbj1-7	T	G	6: 41,512,617 (GRCm39)	Y14*	probably null	Het
Vmn1r217	T	C	13: 23,298,269 (GRCm39)	H211R	probably benign	Het
Vmn2r69	T	A	7: 85,061,755 (GRCm39)	H73L	possibly damaging	Het
Zfp827	T	C	8: 79,902,591 (GRCm39)	L835S	probably damaging	Het

Other mutations in Slc10a6

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00335:Slc10a6	APN	5	103,756,991 (GRCm39)	missense	probably benign	0.16
IGL00428:Slc10a6	APN	5	103,760,362 (GRCm39)	missense	probably benign	0.01
IGL02893:Slc10a6	APN	5	103,776,739 (GRCm39)	missense	probably benign	0.39
R0681:Slc10a6	UTSW	5	103,760,315 (GRCm39)	missense	possibly damaging	0.65
R1300:Slc10a6	UTSW	5	103,754,550 (GRCm39)	missense	probably benign	0.28
R1636:Slc10a6	UTSW	5	103,777,012 (GRCm39)	missense	probably benign	0.00
R2127:Slc10a6	UTSW	5	103,756,922 (GRCm39)	missense	probably benign	0.00
R2129:Slc10a6	UTSW	5	103,756,922 (GRCm39)	missense	probably benign	0.00
R4789:Slc10a6	UTSW	5	103,776,848 (GRCm39)	missense	probably benign	0.03
R4908:Slc10a6	UTSW	5	103,754,493 (GRCm39)	missense	probably benign	0.00
R4976:Slc10a6	UTSW	5	103,754,470 (GRCm39)	missense	probably benign	0.04
R5309:Slc10a6	UTSW	5	103,756,958 (GRCm39)	missense	probably damaging	0.96
R6784:Slc10a6	UTSW	5	103,776,896 (GRCm39)	missense	probably damaging	1.00
R7362:Slc10a6	UTSW	5	103,776,992 (GRCm39)	missense	probably damaging	0.99
R7658:Slc10a6	UTSW	5	103,777,056 (GRCm39)	missense	probably damaging	0.99
R8084:Slc10a6	UTSW	5	103,760,327 (GRCm39)	missense	probably benign
R9145:Slc10a6	UTSW	5	103,776,800 (GRCm39)	missense	probably damaging	1.00
R9190:Slc10a6	UTSW	5	103,765,571 (GRCm39)	missense	probably damaging	0.96
R9345:Slc10a6	UTSW	5	103,754,521 (GRCm39)	missense	probably benign	0.01
RF009:Slc10a6	UTSW	5	103,756,858 (GRCm39)	missense	probably damaging	1.00
X0022:Slc10a6	UTSW	5	103,760,291 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- AGGTGCAACCAGAGCTTCTG -3'
(R):5'- AAGCCCAGCTTCCCATCATTTG -3'

Sequencing Primer
(F):5'- AGAGCTTCTGACTCTCCACAG -3'
(R):5'- GCTGTGTTTCCTGCCCAAG -3'

Posted On

2019-11-12