Mutagenetix > Incidental Mutation

Incidental Mutation 'R7721:Zfp654'

595246

Institutional Source

Beutler Lab

Gene Symbol

Zfp654

Ensembl Gene

ENSMUSG00000047141

Gene Name

zinc finger protein 654

Synonyms

Gm5488, 1600021C16Rik, 1810008K20Rik

MMRRC Submission

045777-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.723) question?

Stock #

R7721 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

64600710-64672015 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 64606570 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Phenylalanine at position 3 (C3F)

Ref Sequence

ENSEMBL: ENSMUSP00000052946 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000052588] [ENSMUST00000207826]

AlphaFold

Q9DAU9

Predicted Effect

probably damaging
Transcript: ENSMUST00000052588
AA Change: C3F

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000052946
Gene: ENSMUSG00000047141
AA Change: C3F

Domain	Start	End	E-Value	Type
ZnF_C2H2	25	47	1.69e-3	SMART
low complexity region	117	132	N/A	INTRINSIC
low complexity region	150	167	N/A	INTRINSIC
ZnF_C2H2	197	222	1.25e-1	SMART
ZnF_C2H2	238	260	4.65e-1	SMART
ZnF_C2H2	266	290	4.98e-1	SMART
ZnF_C2H2	295	319	7.49e0	SMART
ZnF_C2H2	534	554	1.49e2	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000207826
AA Change: C544F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

98% (51/52)

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acad10	T	C	5: 121,784,929 (GRCm39)		probably null	Het
Adamtsl3	T	G	7: 82,255,728 (GRCm39)	M1580R	possibly damaging	Het
Alg9	T	C	9: 50,687,942 (GRCm39)	I78T	probably damaging	Het
Ankmy2	G	T	12: 36,207,143 (GRCm39)		probably benign	Het
Ankrd11	G	T	8: 123,621,498 (GRCm39)	L785M	probably damaging	Het
Atrnl1	T	A	19: 57,684,763 (GRCm39)	D796E	probably benign	Het
C1s2	A	G	6: 124,607,017 (GRCm39)	V277A	possibly damaging	Het
Ccdc121rt3	A	G	5: 112,503,383 (GRCm39)	I107T	probably benign	Het
Cldn15	A	G	5: 136,997,015 (GRCm39)	M19V	probably benign	Het
Cldn23	T	G	8: 36,293,417 (GRCm39)	S24R	possibly damaging	Het
Cnr1	T	A	4: 33,944,416 (GRCm39)	I268N	probably damaging	Het
Csf2ra	A	T	19: 61,215,024 (GRCm39)	W147R	probably damaging	Het
Ctsb	G	T	14: 63,370,765 (GRCm39)		probably benign	Het
D430041D05Rik	A	G	2: 104,088,874 (GRCm39)	M34T	probably benign	Het
Dmtf1	T	C	5: 9,176,564 (GRCm39)	I463V	probably damaging	Het
Dnah7a	T	A	1: 53,670,842 (GRCm39)	D470V	probably benign	Het
Dtx4	A	G	19: 12,459,500 (GRCm39)	S435P	probably benign	Het
Ear2	T	A	14: 44,340,495 (GRCm39)	M51K	probably damaging	Het
Efcab3	T	A	11: 104,615,366 (GRCm39)	L711*	probably null	Het
Elmo1	T	A	13: 20,464,973 (GRCm39)		probably null	Het
Faf1	T	A	4: 109,593,794 (GRCm39)	I124N	probably damaging	Het
Gkap1	A	C	13: 58,384,799 (GRCm39)		probably null	Het
Glipr2	T	C	4: 43,957,770 (GRCm39)	S4P	probably benign	Het
Gm38119	A	T	3: 92,645,337 (GRCm39)	C86S	unknown	Het
Gpr171	T	G	3: 59,005,320 (GRCm39)	I152L	probably benign	Het
Hes7	T	A	11: 69,012,352 (GRCm39)	T9S	unknown	Het
Homer3	T	C	8: 70,743,662 (GRCm39)	V180A	probably benign	Het
Irx1	T	A	13: 72,108,176 (GRCm39)	M169L	probably benign	Het
Kap	A	G	6: 133,828,690 (GRCm39)		probably null	Het
Mgat5b	A	G	11: 116,857,627 (GRCm39)	M2V		Het
Mob4	C	T	1: 55,187,479 (GRCm39)	Q76*	probably null	Het
Or10w3	T	A	19: 13,704,207 (GRCm39)	I194N	possibly damaging	Het
Or8b47	A	T	9: 38,435,013 (GRCm39)		probably null	Het
Or8g26	A	G	9: 39,096,056 (GRCm39)	D191G	probably benign	Het
Pate14	C	T	9: 36,549,159 (GRCm39)	G34R	possibly damaging	Het
Pcdha9	A	T	18: 37,132,689 (GRCm39)	Q586L	probably benign	Het
Pgk2	T	A	17: 40,518,409 (GRCm39)	I340F	probably benign	Het
Prex1	G	A	2: 166,419,810 (GRCm39)	Q1289*	probably null	Het
Prr22	A	G	17: 57,078,819 (GRCm39)	D324G	possibly damaging	Het
Rab2b	A	T	14: 52,501,217 (GRCm39)	S201T	probably benign	Het
Rdh1	T	A	10: 127,596,121 (GRCm39)		probably null	Het
Rhbdl1	G	T	17: 26,055,123 (GRCm39)	N82K	probably benign	Het
Rspo1	C	A	4: 124,885,210 (GRCm39)	Q29K	possibly damaging	Het
Rtp3	A	T	9: 110,814,948 (GRCm39)	Y472*	probably null	Het
Senp5	T	A	16: 31,809,252 (GRCm39)	M1L	unknown	Het
Slfn4	A	T	11: 83,078,389 (GRCm39)		probably null	Het
Stab1	A	G	14: 30,863,413 (GRCm39)	V2091A	possibly damaging	Het
Stk32c	A	G	7: 138,768,069 (GRCm39)	S71P	possibly damaging	Het
Tpr	A	G	1: 150,320,180 (GRCm39)	T2243A	probably benign	Het
Tubgcp6	A	T	15: 88,985,604 (GRCm39)	N1544K	probably damaging	Het
Uqcc1	T	C	2: 155,700,066 (GRCm39)	N202S	probably benign	Het
Vmn2r18	C	T	5: 151,510,158 (GRCm39)	E72K	possibly damaging	Het
Zfp804b	T	C	5: 6,821,263 (GRCm39)	E600G	possibly damaging	Het

Other mutations in Zfp654

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01674:Zfp654	APN	16	64,605,004 (GRCm39)	missense	probably benign	0.02
IGL02043:Zfp654	APN	16	64,605,391 (GRCm39)	missense	probably benign	0.00
IGL02205:Zfp654	APN	16	64,606,329 (GRCm39)	missense	probably damaging	1.00
IGL02337:Zfp654	APN	16	64,605,512 (GRCm39)	missense	probably benign	0.00
IGL02398:Zfp654	APN	16	64,606,381 (GRCm39)	missense	probably benign	0.00
R0025:Zfp654	UTSW	16	64,605,181 (GRCm39)	missense	probably benign	0.31
R0025:Zfp654	UTSW	16	64,605,181 (GRCm39)	missense	probably benign	0.31
R0193:Zfp654	UTSW	16	64,606,051 (GRCm39)	missense	possibly damaging	0.76
R1276:Zfp654	UTSW	16	64,605,699 (GRCm39)	missense	probably damaging	1.00
R1851:Zfp654	UTSW	16	64,605,491 (GRCm39)	missense	probably benign	0.34
R4065:Zfp654	UTSW	16	64,606,288 (GRCm39)	missense	possibly damaging	0.87
R4872:Zfp654	UTSW	16	64,606,145 (GRCm39)	missense	probably benign	0.28
R5693:Zfp654	UTSW	16	64,606,289 (GRCm39)	missense	probably benign	0.00
R6362:Zfp654	UTSW	16	64,606,457 (GRCm39)	nonsense	probably null
R6483:Zfp654	UTSW	16	64,612,310 (GRCm39)	missense	possibly damaging	0.93
R6666:Zfp654	UTSW	16	64,606,596 (GRCm39)	missense	probably benign	0.25
R6852:Zfp654	UTSW	16	64,606,961 (GRCm39)	missense	probably damaging	1.00
R6917:Zfp654	UTSW	16	64,606,834 (GRCm39)	missense	probably damaging	0.98
R7289:Zfp654	UTSW	16	64,605,523 (GRCm39)	missense	probably benign
R7506:Zfp654	UTSW	16	64,612,211 (GRCm39)	missense	probably damaging	0.98
R7598:Zfp654	UTSW	16	64,606,297 (GRCm39)	missense	possibly damaging	0.49
R7791:Zfp654	UTSW	16	64,603,634 (GRCm39)	makesense	probably null
R7884:Zfp654	UTSW	16	64,672,011 (GRCm39)	missense	probably damaging	0.99
R7966:Zfp654	UTSW	16	64,605,239 (GRCm39)	missense	probably damaging	1.00
R8361:Zfp654	UTSW	16	64,612,220 (GRCm39)	missense	probably damaging	1.00
R8487:Zfp654	UTSW	16	64,606,011 (GRCm39)	nonsense	probably null
R8705:Zfp654	UTSW	16	64,605,433 (GRCm39)	missense	possibly damaging	0.46
R9074:Zfp654	UTSW	16	64,611,496 (GRCm39)	missense	probably damaging	0.96
Z1176:Zfp654	UTSW	16	64,606,571 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TCATCCTGTTGTGCAGTAGC -3'
(R):5'- GCGTGATAAATCAGCAGTGAAACTTC -3'

Sequencing Primer
(F):5'- GCAATCTGCTGTCTCTGAATC -3'
(R):5'- GATGCGTCTGTAGTGCAA -3'

Posted On

2019-11-12