Incidental Mutation 'R7725:Or2t43'
| ID |
595456 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2t43
|
| Ensembl Gene |
ENSMUSG00000059279 |
| Gene Name |
olfactory receptor family 2 subfamily T member 43 |
| Synonyms |
GA_x6K02T00261-652-347, Olfr224, Olfr327-ps1, GA_x6K02T2NKPP-858022-858862, MOR275-10_p, MOR275-3 |
| MMRRC Submission |
045781-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.051)
|
| Stock # |
R7725 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
11 |
| Chromosomal Location |
58456682-58461379 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 58457593 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Histidine
at position 193
(Y193H)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150143
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000081102]
[ENSMUST00000215322]
[ENSMUST00000216758]
[ENSMUST00000217009]
|
| AlphaFold |
M9MMJ7 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000081102
AA Change: Y193H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000079881
Gene: ENSMUSG00000059279
AA Change: Y193H
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srsx
|
33 |
299 |
5.1e-7 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
4.4e-35 |
PFAM |
|
Pfam:7tm_4
|
137 |
281 |
5.8e-43 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000215322
AA Change: Y193H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216758
AA Change: Y193H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000217009
AA Change: Y193H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Meta Mutation Damage Score |
0.4726 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 99.3%
|
| Validation Efficiency |
100% (41/41) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Anxa2 |
A |
T |
9: 69,387,410 (GRCm39) |
K6N |
unknown |
Het |
| Arhgap20 |
T |
A |
9: 51,743,050 (GRCm39) |
M296K |
possibly damaging |
Het |
| Bdh1 |
G |
A |
16: 31,256,910 (GRCm39) |
V20I |
not run |
Het |
| Bop1 |
A |
G |
15: 76,339,583 (GRCm39) |
I254T |
probably benign |
Het |
| C1ra |
G |
A |
6: 124,494,684 (GRCm39) |
E316K |
probably benign |
Het |
| Cct4 |
A |
G |
11: 22,940,814 (GRCm39) |
K21E |
probably benign |
Het |
| Cercam |
G |
A |
2: 29,762,574 (GRCm39) |
|
probably null |
Het |
| Clip2 |
A |
T |
5: 134,546,853 (GRCm39) |
Y238* |
probably null |
Het |
| Col19a1 |
A |
T |
1: 24,309,525 (GRCm39) |
S1043T |
possibly damaging |
Het |
| Ctcf |
A |
G |
8: 106,390,468 (GRCm39) |
Y25C |
probably damaging |
Het |
| Dennd4c |
C |
T |
4: 86,704,330 (GRCm39) |
R282C |
probably benign |
Het |
| Eef1g |
T |
A |
19: 8,955,427 (GRCm39) |
H425Q |
probably benign |
Het |
| Fam131b |
C |
T |
6: 42,295,476 (GRCm39) |
A234T |
probably benign |
Het |
| Fam184a |
C |
A |
10: 53,509,802 (GRCm39) |
E126* |
probably null |
Het |
| Fam187b |
A |
G |
7: 30,677,139 (GRCm39) |
D216G |
possibly damaging |
Het |
| Gabra1 |
A |
T |
11: 42,026,270 (GRCm39) |
Y341N |
possibly damaging |
Het |
| Glb1l3 |
T |
A |
9: 26,739,659 (GRCm39) |
|
probably null |
Het |
| Gm3667 |
T |
A |
14: 18,271,599 (GRCm39) |
Q52L |
probably damaging |
Het |
| Gpr179 |
C |
T |
11: 97,242,118 (GRCm39) |
R242H |
probably damaging |
Het |
| Gulo |
T |
C |
14: 66,245,522 (GRCm39) |
Y24C |
probably damaging |
Het |
| Hectd4 |
A |
T |
5: 121,358,680 (GRCm39) |
E49V |
unknown |
Het |
| Htra4 |
A |
G |
8: 25,527,169 (GRCm39) |
S209P |
possibly damaging |
Het |
| Lmntd1 |
A |
G |
6: 145,489,196 (GRCm39) |
S22P |
probably benign |
Het |
| Lypd8l |
A |
T |
11: 58,499,325 (GRCm39) |
N164K |
probably benign |
Het |
| Med12l |
A |
G |
3: 59,163,413 (GRCm39) |
K1347E |
probably damaging |
Het |
| Mrc1 |
C |
A |
2: 14,284,788 (GRCm39) |
D592E |
probably benign |
Het |
| Muc15 |
A |
G |
2: 110,562,143 (GRCm39) |
D193G |
probably damaging |
Het |
| Ncor2 |
A |
G |
5: 125,100,630 (GRCm39) |
V1316A |
|
Het |
| Odad1 |
T |
A |
7: 45,597,835 (GRCm39) |
S582T |
probably damaging |
Het |
| Or2y10 |
A |
T |
11: 49,455,359 (GRCm39) |
I204L |
probably benign |
Het |
| Or5t16 |
T |
C |
2: 86,819,323 (GRCm39) |
I66V |
probably benign |
Het |
| Serpina6 |
A |
T |
12: 103,614,936 (GRCm39) |
Y303* |
probably null |
Het |
| Shld2 |
T |
G |
14: 33,990,661 (GRCm39) |
T82P |
possibly damaging |
Het |
| Shroom3 |
T |
C |
5: 93,089,512 (GRCm39) |
L754P |
probably benign |
Het |
| Skint5 |
C |
A |
4: 113,685,099 (GRCm39) |
L539F |
unknown |
Het |
| St3gal4 |
C |
A |
9: 34,964,375 (GRCm39) |
R209L |
possibly damaging |
Het |
| Tex14 |
A |
C |
11: 87,385,868 (GRCm39) |
T243P |
probably damaging |
Het |
| Ttc12 |
T |
A |
9: 49,351,602 (GRCm39) |
M632L |
probably benign |
Het |
| Ttn |
T |
C |
2: 76,738,116 (GRCm39) |
E4187G |
unknown |
Het |
| Txk |
G |
A |
5: 72,864,900 (GRCm39) |
A379V |
probably damaging |
Het |
| Wdr43 |
A |
G |
17: 71,923,338 (GRCm39) |
Y28C |
probably benign |
Het |
| Zfp1005 |
A |
G |
2: 150,110,468 (GRCm39) |
Y386C |
unknown |
Het |
| Zfp40 |
A |
G |
17: 23,397,251 (GRCm39) |
V82A |
probably benign |
Het |
| Zfp994 |
A |
T |
17: 22,419,091 (GRCm39) |
N619K |
probably benign |
Het |
|
| Other mutations in Or2t43 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00321:Or2t43
|
APN |
11 |
58,457,593 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02327:Or2t43
|
APN |
11 |
58,457,761 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02904:Or2t43
|
APN |
11 |
58,457,623 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
IGL02968:Or2t43
|
APN |
11 |
58,458,021 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1704:Or2t43
|
UTSW |
11 |
58,457,580 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2055:Or2t43
|
UTSW |
11 |
58,457,673 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3925:Or2t43
|
UTSW |
11 |
58,457,652 (GRCm39) |
missense |
probably benign |
0.34 |
|
R4093:Or2t43
|
UTSW |
11 |
58,457,655 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4902:Or2t43
|
UTSW |
11 |
58,457,451 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R4955:Or2t43
|
UTSW |
11 |
58,457,344 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4956:Or2t43
|
UTSW |
11 |
58,457,344 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4957:Or2t43
|
UTSW |
11 |
58,457,344 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5436:Or2t43
|
UTSW |
11 |
58,457,763 (GRCm39) |
missense |
probably benign |
0.34 |
|
R6699:Or2t43
|
UTSW |
11 |
58,458,031 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R6825:Or2t43
|
UTSW |
11 |
58,457,476 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R7467:Or2t43
|
UTSW |
11 |
58,457,288 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R7590:Or2t43
|
UTSW |
11 |
58,458,085 (GRCm39) |
missense |
probably benign |
0.09 |
|
R7600:Or2t43
|
UTSW |
11 |
58,458,162 (GRCm39) |
missense |
probably benign |
0.17 |
|
R8438:Or2t43
|
UTSW |
11 |
58,457,665 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R8848:Or2t43
|
UTSW |
11 |
58,457,902 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8867:Or2t43
|
UTSW |
11 |
58,457,562 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9376:Or2t43
|
UTSW |
11 |
58,457,683 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
X0026:Or2t43
|
UTSW |
11 |
58,458,000 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
Z1186:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1186:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1186:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1187:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1187:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1187:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1188:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1188:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1188:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1189:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1189:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1189:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1190:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1190:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1190:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1191:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1191:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1191:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1192:Or2t43
|
UTSW |
11 |
58,457,920 (GRCm39) |
missense |
probably benign |
0.02 |
|
Z1192:Or2t43
|
UTSW |
11 |
58,457,521 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1192:Or2t43
|
UTSW |
11 |
58,457,388 (GRCm39) |
missense |
probably benign |
0.02 |
|
| Predicted Primers |
PCR Primer
(F):5'- ATGTCCTTCTCAGGGCTGTG -3'
(R):5'- TGTCCTCATGAACCACAGGG -3'
Sequencing Primer
(F):5'- TGTAGGTATAAATAGCAGCGCC -3'
(R):5'- ACAGGGTGTGTCTCCTCCTG -3'
|
| Posted On |
2019-11-12 |
Incidental Mutation