Mutagenetix > Incidental Mutation

Incidental Mutation 'R7375:Slc22a26'

596141

Institutional Source

Beutler Lab

Gene Symbol

Slc22a26

Ensembl Gene

ENSMUSG00000053303

Gene Name

solute carrier family 22 (organic cation transporter), member 26

Synonyms

BC014805

MMRRC Submission

045458-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.049) question?

Stock #

R7375 (G1)

Quality Score

218.009

Status

Validated

Chromosome

Chromosomal Location

7758406-7780032 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to T at 7760509 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000113607 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000065634] [ENSMUST00000120522]

AlphaFold

Q91WJ2

Predicted Effect

probably null
Transcript: ENSMUST00000065634

SMART Domains

Protein: ENSMUSP00000064809
Gene: ENSMUSG00000053303

Domain	Start	End	E-Value	Type
transmembrane domain	15	37	N/A	INTRINSIC
low complexity region	53	64	N/A	INTRINSIC
Pfam:Sugar_tr	96	528	1.1e-23	PFAM
Pfam:MFS_1	124	370	7.8e-17	PFAM
Pfam:MFS_1	350	547	2.1e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000120522

SMART Domains

Protein: ENSMUSP00000113607
Gene: ENSMUSG00000053303

Domain	Start	End	E-Value	Type
transmembrane domain	15	37	N/A	INTRINSIC
low complexity region	53	64	N/A	INTRINSIC
Pfam:Sugar_tr	94	527	4.9e-23	PFAM
Pfam:MFS_1	124	358	1.2e-15	PFAM
Pfam:MFS_1	349	547	2.4e-12	PFAM

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

100% (59/59)

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcb4	A	G	5: 8,968,671 (GRCm39)	I337V	probably benign	Het
Abl2	A	G	1: 156,450,184 (GRCm39)	D117G	probably damaging	Het
Arhgap5	T	A	12: 52,563,365 (GRCm39)	L112*	probably null	Het
Brinp3	C	G	1: 146,777,748 (GRCm39)	L732V	possibly damaging	Het
Ccdc168	A	T	1: 44,099,694 (GRCm39)	I468N	possibly damaging	Het
Cfap91	T	A	16: 38,155,980 (GRCm39)	H81L	probably damaging	Het
Cmya5	T	G	13: 93,228,169 (GRCm39)	K2306N	probably damaging	Het
Col16a1	A	C	4: 129,959,294 (GRCm39)	K680T	unknown	Het
Col28a1	T	A	6: 7,998,499 (GRCm39)	T1137S	possibly damaging	Het
Crnn	A	T	3: 93,056,452 (GRCm39)	T413S	possibly damaging	Het
Csf1	A	G	3: 107,655,495 (GRCm39)	L512P	possibly damaging	Het
Dlx3	C	A	11: 95,011,461 (GRCm39)	A105D	possibly damaging	Het
Dnah3	T	G	7: 119,550,900 (GRCm39)	T161P	probably damaging	Het
Dnah7b	A	G	1: 46,342,794 (GRCm39)	D3435G	probably damaging	Het
Dpp10	A	G	1: 123,295,524 (GRCm39)	I541T	probably benign	Het
Efcc1	T	C	6: 87,728,838 (GRCm39)	V431A	possibly damaging	Het
Enpp5	T	C	17: 44,391,868 (GRCm39)	I99T	probably benign	Het
Gm11232	C	T	4: 71,675,583 (GRCm39)	W59*	probably null	Het
Gxylt2	A	T	6: 100,727,383 (GRCm39)	T166S	probably benign	Het
Herc6	A	T	6: 57,628,791 (GRCm39)		probably null	Het
Itga2	T	C	13: 115,005,753 (GRCm39)	I476V	probably benign	Het
Kcnq5	T	C	1: 21,539,710 (GRCm39)	T403A	possibly damaging	Het
Klhl42	A	G	6: 146,993,538 (GRCm39)	K170R	probably benign	Het
Klk13	T	C	7: 43,370,582 (GRCm39)		probably null	Het
Krt32	G	T	11: 99,972,050 (GRCm39)	R433S	probably benign	Het
Lrp1	G	T	10: 127,375,217 (GRCm39)	T4461N	probably damaging	Het
Mapk10	A	T	5: 103,124,256 (GRCm39)	M256K	probably null	Het
Mogat2	T	C	7: 98,872,905 (GRCm39)	K93R	probably damaging	Het
Myh1	G	T	11: 67,101,254 (GRCm39)	V677L	probably damaging	Het
Naip5	G	T	13: 100,356,205 (GRCm39)	Q1137K	not run	Het
Naip5	T	C	13: 100,356,204 (GRCm39)	Q1137R	probably benign	Het
Oog4	G	A	4: 143,165,544 (GRCm39)	T201M	possibly damaging	Het
Or4a70	C	T	2: 89,324,036 (GRCm39)	G207R	possibly damaging	Het
Pik3c2a	T	C	7: 115,975,621 (GRCm39)	T649A	probably damaging	Het
Plec	T	A	15: 76,061,555 (GRCm39)	H2794L	possibly damaging	Het
Pros1	T	A	16: 62,744,913 (GRCm39)	N509K	probably damaging	Het
Psme3ip1	G	A	8: 95,309,636 (GRCm39)	L119F	probably benign	Het
Psme4	T	A	11: 30,722,700 (GRCm39)		probably null	Het
Ptprf	A	G	4: 118,070,011 (GRCm39)	V1457A	probably benign	Het
Rad50	A	G	11: 53,543,055 (GRCm39)		probably null	Het
Rfx5	C	T	3: 94,866,053 (GRCm39)	P451S	unknown	Het
Scpppq1	G	T	5: 104,219,123 (GRCm39)		probably null	Het
Sdk1	G	T	5: 141,984,598 (GRCm39)	V728L	probably benign	Het
Sfxn4	T	C	19: 60,847,112 (GRCm39)	D57G	probably benign	Het
Slc10a4	A	G	5: 73,169,650 (GRCm39)	D425G	probably benign	Het
Slc17a5	C	T	9: 78,495,174 (GRCm39)	A26T	probably benign	Het
Slc22a30	A	G	19: 8,382,055 (GRCm39)	L72P	probably damaging	Het
Slco6c1	T	C	1: 97,009,146 (GRCm39)	T447A	possibly damaging	Het
Slco6d1	A	G	1: 98,349,172 (GRCm39)	N81S	probably damaging	Het
Stard9	T	C	2: 120,495,483 (GRCm39)		probably null	Het
Tecpr1	T	C	5: 144,145,417 (GRCm39)	E610G	possibly damaging	Het
Tmem81	G	T	1: 132,435,301 (GRCm39)	V36L	possibly damaging	Het
Trabd2b	G	T	4: 114,467,194 (GRCm39)	K474N	probably benign	Het
Tspan33	T	C	6: 29,713,519 (GRCm39)	F149L	probably benign	Het
Ttn	A	G	2: 76,606,683 (GRCm39)	Y18076H	probably damaging	Het
Utrn	G	A	10: 12,516,764 (GRCm39)	R2277C	probably damaging	Het
Vmn2r101	T	A	17: 19,831,652 (GRCm39)	D549E	probably damaging	Het
Vmn2r107	T	A	17: 20,576,138 (GRCm39)	I156K	probably benign	Het
Wwc2	T	G	8: 48,316,955 (GRCm39)	S713R	unknown	Het
Xndc1	C	A	7: 101,730,687 (GRCm39)		probably null	Het
Zfp810	A	G	9: 22,201,833 (GRCm39)		probably null	Het

Other mutations in Slc22a26

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00155:Slc22a26	APN	19	7,760,201 (GRCm39)	missense	probably damaging	0.99
IGL00338:Slc22a26	APN	19	7,760,340 (GRCm39)	missense	probably benign	0.25
IGL00736:Slc22a26	APN	19	7,767,527 (GRCm39)	missense	possibly damaging	0.50
IGL01085:Slc22a26	APN	19	7,767,464 (GRCm39)	missense	probably benign	0.02
IGL01581:Slc22a26	APN	19	7,779,549 (GRCm39)	missense	probably benign	0.15
IGL02502:Slc22a26	APN	19	7,768,125 (GRCm39)	critical splice donor site	probably null
IGL02658:Slc22a26	APN	19	7,765,613 (GRCm39)	missense	probably benign	0.25
IGL02936:Slc22a26	APN	19	7,768,470 (GRCm39)	missense	probably damaging	0.99
IGL03162:Slc22a26	APN	19	7,779,466 (GRCm39)	missense	probably benign	0.00
R0034:Slc22a26	UTSW	19	7,779,618 (GRCm39)	missense	probably benign	0.03
R0633:Slc22a26	UTSW	19	7,765,575 (GRCm39)	critical splice donor site	probably null
R0676:Slc22a26	UTSW	19	7,773,509 (GRCm39)	splice site	probably benign
R2156:Slc22a26	UTSW	19	7,779,480 (GRCm39)	missense	probably damaging	1.00
R4043:Slc22a26	UTSW	19	7,765,694 (GRCm39)	critical splice acceptor site	probably null
R4781:Slc22a26	UTSW	19	7,767,500 (GRCm39)	missense	probably benign	0.34
R4896:Slc22a26	UTSW	19	7,768,419 (GRCm39)	missense	probably benign	0.14
R4999:Slc22a26	UTSW	19	7,779,546 (GRCm39)	missense	probably damaging	1.00
R5125:Slc22a26	UTSW	19	7,767,540 (GRCm39)	missense	possibly damaging	0.62
R5178:Slc22a26	UTSW	19	7,767,540 (GRCm39)	missense	possibly damaging	0.62
R6161:Slc22a26	UTSW	19	7,763,812 (GRCm39)	missense	possibly damaging	0.50
R6494:Slc22a26	UTSW	19	7,779,651 (GRCm39)	missense	probably damaging	1.00
R6512:Slc22a26	UTSW	19	7,779,865 (GRCm39)	start gained	probably benign
R6724:Slc22a26	UTSW	19	7,779,726 (GRCm39)	missense	probably benign	0.14
R7323:Slc22a26	UTSW	19	7,768,259 (GRCm39)	missense	probably damaging	0.97
R7558:Slc22a26	UTSW	19	7,762,651 (GRCm39)	missense	possibly damaging	0.94
R7634:Slc22a26	UTSW	19	7,779,952 (GRCm39)	splice site	probably null
R8772:Slc22a26	UTSW	19	7,767,477 (GRCm39)	missense	probably benign	0.27
R8905:Slc22a26	UTSW	19	7,760,331 (GRCm39)	missense	probably damaging	0.97
R8937:Slc22a26	UTSW	19	7,768,390 (GRCm39)	splice site	probably benign
R9059:Slc22a26	UTSW	19	7,762,559 (GRCm39)	missense	probably benign	0.01
R9659:Slc22a26	UTSW	19	7,763,798 (GRCm39)	missense	probably benign	0.02
R9788:Slc22a26	UTSW	19	7,763,798 (GRCm39)	missense	probably benign	0.02

Predicted Primers

PCR Primer
(F):5'- CAGAGTACAGCGTGAGGATC -3'
(R):5'- TTAGATTCATACCCAGGAATAGCAG -3'

Sequencing Primer
(F):5'- CAATGACTCCTAATGCTGTTGC -3'
(R):5'- CATACCCAGGAATAGCAGGGTCTTG -3'

Posted On

2019-11-21