Mutagenetix > Incidental Mutation

Incidental Mutation 'R7743:Gm5773'

596639

Institutional Source

Beutler Lab

Gene Symbol

Gm5773

Ensembl Gene

ENSMUSG00000068879

Gene Name

predicted pseudogene 5773

Synonyms

MMRRC Submission

045799-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.858) question?

Stock #

R7743 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

93680307-93681449 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 93680565 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Glycine at position 79 (V79G)

Ref Sequence

ENSEMBL: ENSMUSP00000088366 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000090853]

AlphaFold

Q717B2

Predicted Effect

probably damaging
Transcript: ENSMUST00000090853
AA Change: V79G

PolyPhen 2 Score 0.970 (Sensitivity: 0.77; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000088366
Gene: ENSMUSG00000068879
AA Change: V79G

Domain	Start	End	E-Value	Type
MATH	40	130	2.58e-7	SMART
BTB	188	287	2.82e-24	SMART

Meta Mutation Damage Score

0.6329

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

97% (77/79)

Allele List at MGI

Other mutations in this stock

Total: 83 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110002E22Rik	A	G	3: 137,774,516 (GRCm39)	E1235G	probably damaging	Het
Abtb3	A	T	10: 85,460,813 (GRCm39)	I569F	possibly damaging	Het
Adam6a	A	G	12: 113,508,152 (GRCm39)	D175G	probably benign	Het
Adgrf4	A	T	17: 42,983,453 (GRCm39)	C76*	probably null	Het
Agbl3	C	T	6: 34,823,765 (GRCm39)	T815I	probably damaging	Het
Ahnak2	A	G	12: 112,748,383 (GRCm39)	V488A	not run	Het
Akip1	T	A	7: 109,311,035 (GRCm39)	S192T	probably benign	Het
Apc2	G	A	10: 80,140,749 (GRCm39)	M201I	probably damaging	Het
Arel1	G	T	12: 84,987,043 (GRCm39)	N124K	probably damaging	Het
Atp10a	A	T	7: 58,453,457 (GRCm39)	H845L	probably damaging	Het
Atp2a2	A	G	5: 122,599,634 (GRCm39)	Y586H	probably benign	Het
BC051019	A	G	7: 109,315,266 (GRCm39)	Y330H	probably damaging	Het
Ccng2	C	G	5: 93,421,202 (GRCm39)	S237R	probably benign	Het
Chek2	T	G	5: 110,987,916 (GRCm39)		probably null	Het
Cldn14	A	G	16: 93,716,615 (GRCm39)	L77S	probably damaging	Het
Cox15	T	C	19: 43,728,380 (GRCm39)	K298E	possibly damaging	Het
Cpt1b	G	T	15: 89,305,607 (GRCm39)	D369E	probably benign	Het
Cpxm1	T	C	2: 130,235,342 (GRCm39)	N550S	probably benign	Het
Csdc2	A	G	15: 81,833,399 (GRCm39)	E132G	possibly damaging	Het
Cyb5d2	A	T	11: 72,669,702 (GRCm39)	C219S	probably damaging	Het
Erbb4	T	C	1: 68,367,278 (GRCm39)	T480A	probably benign	Het
Fndc1	G	A	17: 7,983,969 (GRCm39)	T1319I	unknown	Het
Hsf2	G	A	10: 57,387,431 (GRCm39)		probably null	Het
Itgb2l	T	C	16: 96,238,608 (GRCm39)	T64A	probably damaging	Het
Kifc5b	T	C	17: 27,143,176 (GRCm39)	V316A	probably damaging	Het
Ktn1	A	G	14: 47,907,750 (GRCm39)	D279G	probably damaging	Het
Lonrf1	T	C	8: 36,716,206 (GRCm39)	E143G	possibly damaging	Het
Mroh9	C	T	1: 162,852,122 (GRCm39)	E856K	probably benign	Het
Muc16	T	C	9: 18,568,773 (GRCm39)	T1249A	unknown	Het
Myh6	G	A	14: 55,194,607 (GRCm39)	R721W	probably damaging	Het
Myo6	A	T	9: 80,183,611 (GRCm39)	I669F	unknown	Het
N4bp2	A	G	5: 65,965,802 (GRCm39)	T1284A	probably damaging	Het
Npr3	A	G	15: 11,905,724 (GRCm39)	M1T	probably null	Het
Obscn	C	T	11: 58,990,603 (GRCm39)	V1657M	probably damaging	Het
Olfr908	A	G	9: 38,427,624 (GRCm39)	T99A	possibly damaging	Het
Or52a20	A	G	7: 103,366,560 (GRCm39)	E253G	possibly damaging	Het
Or52p2	A	T	7: 102,237,638 (GRCm39)	F104Y	probably benign	Het
Otud6b	C	A	4: 14,818,389 (GRCm39)	A171S	possibly damaging	Het
Pdcd2l	A	C	7: 33,892,256 (GRCm39)	D204E	probably benign	Het
Pdia2	T	C	17: 26,417,842 (GRCm39)	S56G	probably benign	Het
Plcxd1	G	A	5: 110,250,369 (GRCm39)	E237K	possibly damaging	Het
Plekha5	A	T	6: 140,501,712 (GRCm39)	R633S	probably damaging	Het
Pnpla6	T	C	8: 3,586,594 (GRCm39)	F937L	possibly damaging	Het
Pth2	A	T	7: 44,830,733 (GRCm39)	M6L	probably benign	Het
Ptprd	T	A	4: 76,004,326 (GRCm39)	K143I	probably damaging	Het
Rhbdf2	T	C	11: 116,492,427 (GRCm39)	D487G	probably benign	Het
Rhbdf2	A	T	11: 116,494,775 (GRCm39)	D300E	probably benign	Het
Rock2	G	A	12: 17,026,048 (GRCm39)	V1265I	probably damaging	Het
Rsf1	CGGC	CGGCGGCGGAGGC	7: 97,229,139 (GRCm39)		probably benign	Het
Rtn4	T	A	11: 29,683,790 (GRCm39)	Y1027*	probably null	Het
Rxfp3	A	G	15: 11,037,216 (GRCm39)	L52P	probably damaging	Het
Sel1l3	A	G	5: 53,293,227 (GRCm39)	Y830H	probably benign	Het
Serpinb3d	C	T	1: 107,007,088 (GRCm39)	V207I	probably damaging	Het
Sipa1l2	T	C	8: 126,190,972 (GRCm39)	E1006G	probably damaging	Het
Slc22a19	C	T	19: 7,661,201 (GRCm39)	M324I	possibly damaging	Het
Slc37a1	T	A	17: 31,535,159 (GRCm39)	F106I	probably damaging	Het
Snx14	A	T	9: 88,280,402 (GRCm39)	S518T	probably benign	Het
Sp2	T	C	11: 96,851,935 (GRCm39)	T330A	probably damaging	Het
Spata13	A	T	14: 60,993,698 (GRCm39)	H1050L	probably damaging	Het
Sptssa	A	C	12: 54,703,201 (GRCm39)	V23G	possibly damaging	Het
Syt3	A	T	7: 44,042,091 (GRCm39)	I317F	probably damaging	Het
Tars1	A	C	15: 11,399,458 (GRCm39)		probably null	Het
Tead3	T	A	17: 28,551,801 (GRCm39)	T431S	probably benign	Het
Tiam2	G	A	17: 3,568,431 (GRCm39)	E1526K	possibly damaging	Het
Tnni3	G	A	7: 4,524,891 (GRCm39)	P12L	probably benign	Het
Topaz1	A	G	9: 122,614,201 (GRCm39)	H1207R	probably benign	Het
Trdn	G	T	10: 33,133,058 (GRCm39)	E107*	probably null	Het
Trp63	A	G	16: 25,701,375 (GRCm39)	N483S	probably benign	Het
Trpm4	A	G	7: 44,957,762 (GRCm39)	S1009P	probably benign	Het
Trpm6	T	C	19: 18,804,772 (GRCm39)	V908A	probably benign	Het
Tsen34	A	T	7: 3,697,601 (GRCm39)	M25L	possibly damaging	Het
Ttn	T	C	2: 76,781,827 (GRCm39)	E1073G	unknown	Het
Uaca	A	T	9: 60,783,677 (GRCm39)	I1380F	probably damaging	Het
Ubr3	A	G	2: 69,774,793 (GRCm39)	T539A	probably benign	Het
Ugt1a5	T	A	1: 88,094,117 (GRCm39)	M115K	probably benign	Het
Unc45b	A	T	11: 82,813,726 (GRCm39)	I378F	probably damaging	Het
Unk	G	A	11: 115,940,262 (GRCm39)	R205Q	possibly damaging	Het
Ush2a	T	A	1: 188,542,376 (GRCm39)	L3314Q	probably benign	Het
Vezt	A	G	10: 93,816,286 (GRCm39)	L475P	probably damaging	Het
Vmn2r115	C	T	17: 23,564,772 (GRCm39)	Q220*	probably null	Het
Yap1	T	C	9: 7,962,379 (GRCm39)	Q223R	probably benign	Het
Zdhhc7	G	A	8: 120,813,467 (GRCm39)	T114M	possibly damaging	Het
Zwilch	A	C	9: 64,060,217 (GRCm39)	C374G	probably damaging	Het

Other mutations in Gm5773

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02954:Gm5773	APN	3	93,680,358 (GRCm39)	missense	probably benign	0.15
IGL03411:Gm5773	APN	3	93,681,264 (GRCm39)	missense	probably damaging	1.00
BB005:Gm5773	UTSW	3	93,680,997 (GRCm39)	missense	probably damaging	0.96
BB015:Gm5773	UTSW	3	93,680,997 (GRCm39)	missense	probably damaging	0.96
R0239:Gm5773	UTSW	3	93,681,339 (GRCm39)	missense	probably benign	0.01
R0239:Gm5773	UTSW	3	93,681,339 (GRCm39)	missense	probably benign	0.01
R1087:Gm5773	UTSW	3	93,681,065 (GRCm39)	missense	probably damaging	1.00
R1884:Gm5773	UTSW	3	93,681,348 (GRCm39)	missense	probably benign	0.00
R2122:Gm5773	UTSW	3	93,680,624 (GRCm39)	missense	possibly damaging	0.78
R2182:Gm5773	UTSW	3	93,680,820 (GRCm39)	missense	probably benign	0.00
R4615:Gm5773	UTSW	3	93,681,339 (GRCm39)	missense	probably benign	0.01
R4650:Gm5773	UTSW	3	93,680,712 (GRCm39)	missense	probably benign	0.04
R5127:Gm5773	UTSW	3	93,680,735 (GRCm39)	missense	probably benign
R5141:Gm5773	UTSW	3	93,681,034 (GRCm39)	missense	probably benign	0.04
R5347:Gm5773	UTSW	3	93,681,090 (GRCm39)	missense	probably damaging	0.99
R6883:Gm5773	UTSW	3	93,681,162 (GRCm39)	missense	probably benign	0.31
R6962:Gm5773	UTSW	3	93,681,234 (GRCm39)	missense	possibly damaging	0.90
R7444:Gm5773	UTSW	3	93,680,850 (GRCm39)	missense	probably damaging	1.00
R7549:Gm5773	UTSW	3	93,680,323 (GRCm39)	start gained	probably benign
R7916:Gm5773	UTSW	3	93,680,586 (GRCm39)	missense	possibly damaging	0.52
R7928:Gm5773	UTSW	3	93,680,997 (GRCm39)	missense	probably damaging	0.96
R7992:Gm5773	UTSW	3	93,680,373 (GRCm39)	missense	possibly damaging	0.66
R8024:Gm5773	UTSW	3	93,680,475 (GRCm39)	missense	probably benign	0.06
R8500:Gm5773	UTSW	3	93,680,835 (GRCm39)	missense	probably benign	0.00
R8805:Gm5773	UTSW	3	93,681,042 (GRCm39)	missense	probably damaging	1.00
R9135:Gm5773	UTSW	3	93,681,179 (GRCm39)	missense	possibly damaging	0.94
R9281:Gm5773	UTSW	3	93,680,891 (GRCm39)	missense	probably benign	0.12
R9554:Gm5773	UTSW	3	93,680,340 (GRCm39)	missense	probably benign	0.00
R9566:Gm5773	UTSW	3	93,680,742 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CATGGAAGCCAAGATCTGGG -3'
(R):5'- TAGAAGCCAATTCCGATGGG -3'

Sequencing Primer
(F):5'- AGAATTCTGCTATGAGTGGACC -3'
(R):5'- CCAATTCCGATGGGAGAGG -3'

Posted On

2019-11-26