Incidental Mutation 'R7753:Vmn2r96'
ID |
597401 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r96
|
Ensembl Gene |
ENSMUSG00000091679 |
Gene Name |
vomeronasal 2, receptor 96 |
Synonyms |
EG433070 |
MMRRC Submission |
045809-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.157)
|
Stock # |
R7753 (G1)
|
Quality Score |
215.009 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
18793282-18818419 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 18806663 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Serine
at position 537
(T537S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000135095
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000165692]
[ENSMUST00000177244]
[ENSMUST00000231261]
[ENSMUST00000231286]
|
AlphaFold |
E9PZU5 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000165692
AA Change: T345S
PolyPhen 2
Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000131564 Gene: ENSMUSG00000091679 AA Change: T345S
Domain | Start | End | E-Value | Type |
Pfam:ANF_receptor
|
1 |
257 |
8.6e-20 |
PFAM |
Pfam:NCD3G
|
317 |
370 |
3.7e-22 |
PFAM |
Pfam:7tm_3
|
402 |
638 |
3.9e-53 |
PFAM |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000177244
AA Change: T537S
PolyPhen 2
Score 0.457 (Sensitivity: 0.89; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000135095 Gene: ENSMUSG00000091679 AA Change: T537S
Domain | Start | End | E-Value | Type |
Pfam:ANF_receptor
|
1 |
245 |
4.2e-19 |
PFAM |
Pfam:NCD3G
|
317 |
370 |
6.9e-21 |
PFAM |
Pfam:7tm_3
|
400 |
639 |
3.4e-75 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000231261
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000231286
AA Change: T537S
PolyPhen 2
Score 0.457 (Sensitivity: 0.89; Specificity: 0.90)
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.2%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 77 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca6 |
T |
C |
11: 110,074,933 (GRCm39) |
T1377A |
probably damaging |
Het |
AI661453 |
G |
T |
17: 47,778,439 (GRCm39) |
E722* |
probably null |
Het |
Ap2b1 |
A |
T |
11: 83,258,733 (GRCm39) |
K735* |
probably null |
Het |
Aqp4 |
T |
C |
18: 15,533,033 (GRCm39) |
E20G |
probably benign |
Het |
Atp6v1b1 |
G |
T |
6: 83,729,440 (GRCm39) |
V117L |
probably benign |
Het |
C1rb |
A |
G |
6: 124,557,390 (GRCm39) |
N509S |
probably benign |
Het |
Cep44 |
A |
G |
8: 56,985,842 (GRCm39) |
V350A |
probably benign |
Het |
Cmya5 |
T |
C |
13: 93,234,680 (GRCm39) |
Q136R |
probably benign |
Het |
Cntrl |
T |
C |
2: 35,001,691 (GRCm39) |
S32P |
probably damaging |
Het |
Cyp2d12 |
A |
T |
15: 82,441,164 (GRCm39) |
E201V |
possibly damaging |
Het |
Cyp4a14 |
G |
T |
4: 115,350,861 (GRCm39) |
Q138K |
probably damaging |
Het |
Dapk1 |
T |
C |
13: 60,899,007 (GRCm39) |
Y826H |
possibly damaging |
Het |
Dbh |
A |
G |
2: 27,061,448 (GRCm39) |
D294G |
probably benign |
Het |
Ddx10 |
A |
T |
9: 53,136,904 (GRCm39) |
L336Q |
probably damaging |
Het |
Dop1a |
A |
G |
9: 86,371,755 (GRCm39) |
T149A |
possibly damaging |
Het |
Epg5 |
A |
G |
18: 77,991,560 (GRCm39) |
T86A |
possibly damaging |
Het |
Fam171a1 |
A |
T |
2: 3,179,354 (GRCm39) |
Q60L |
probably damaging |
Het |
Farsb |
T |
A |
1: 78,456,740 (GRCm39) |
E41D |
probably benign |
Het |
Frem1 |
T |
C |
4: 82,832,217 (GRCm39) |
D1956G |
probably benign |
Het |
Fzd4 |
T |
A |
7: 89,056,992 (GRCm39) |
Y346* |
probably null |
Het |
Fzd7 |
A |
T |
1: 59,522,641 (GRCm39) |
S175C |
probably benign |
Het |
Gdi2 |
A |
G |
13: 3,598,956 (GRCm39) |
T47A |
probably benign |
Het |
Gpr155 |
A |
T |
2: 73,212,550 (GRCm39) |
H24Q |
probably benign |
Het |
Hdac7 |
A |
T |
15: 97,698,642 (GRCm39) |
N638K |
possibly damaging |
Het |
Hdac7 |
G |
T |
15: 97,704,369 (GRCm39) |
N515K |
probably benign |
Het |
Hnrnpul2 |
T |
C |
19: 8,802,336 (GRCm39) |
V401A |
probably damaging |
Het |
Ifi27l2b |
T |
A |
12: 103,417,519 (GRCm39) |
R223* |
probably null |
Het |
Igkv4-91 |
T |
G |
6: 68,745,761 (GRCm39) |
S46R |
probably benign |
Het |
Itk |
T |
A |
11: 46,222,722 (GRCm39) |
L582F |
probably damaging |
Het |
Kcnab2 |
T |
C |
4: 152,481,218 (GRCm39) |
I181V |
probably benign |
Het |
Krtap5-2 |
GCCACAGCCTCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACCACAGCCTCC |
GCCACAGCCTCC |
7: 141,729,136 (GRCm39) |
|
probably benign |
Het |
Lce1m |
C |
A |
3: 92,925,815 (GRCm39) |
G41W |
unknown |
Het |
Mapk10 |
T |
A |
5: 103,186,419 (GRCm39) |
K98* |
probably null |
Het |
Mapk8ip2 |
A |
G |
15: 89,345,856 (GRCm39) |
E812G |
probably damaging |
Het |
Mlh1 |
C |
A |
9: 111,081,931 (GRCm39) |
|
probably null |
Het |
Mroh1 |
A |
G |
15: 76,317,475 (GRCm39) |
D784G |
possibly damaging |
Het |
Neo1 |
A |
T |
9: 58,863,288 (GRCm39) |
D426E |
probably benign |
Het |
Nol4 |
T |
A |
18: 23,171,659 (GRCm39) |
M1L |
probably benign |
Het |
Nr1h3 |
A |
G |
2: 91,015,370 (GRCm39) |
F338S |
probably damaging |
Het |
Oasl2 |
A |
G |
5: 115,043,118 (GRCm39) |
K297E |
probably benign |
Het |
Or10ag59 |
A |
G |
2: 87,406,141 (GRCm39) |
T238A |
probably benign |
Het |
Or10z1 |
C |
T |
1: 174,078,236 (GRCm39) |
V86I |
probably benign |
Het |
Or4f14 |
A |
G |
2: 111,742,927 (GRCm39) |
I116T |
probably benign |
Het |
Or56a5 |
T |
C |
7: 104,793,007 (GRCm39) |
I164M |
probably benign |
Het |
Or5m5 |
A |
G |
2: 85,815,060 (GRCm39) |
N292S |
possibly damaging |
Het |
Osbpl9 |
T |
C |
4: 108,990,970 (GRCm39) |
T97A |
possibly damaging |
Het |
P3h2 |
A |
T |
16: 25,789,687 (GRCm39) |
Y527N |
probably damaging |
Het |
Papss2 |
A |
T |
19: 32,597,579 (GRCm39) |
H9L |
probably benign |
Het |
Pcdha4 |
C |
A |
18: 37,086,354 (GRCm39) |
S179Y |
possibly damaging |
Het |
Ppt1 |
A |
T |
4: 122,730,131 (GRCm39) |
D28V |
possibly damaging |
Het |
Prkcz |
T |
A |
4: 155,357,425 (GRCm39) |
Q345L |
possibly damaging |
Het |
Prr14l |
G |
T |
5: 32,984,597 (GRCm39) |
L1633I |
probably damaging |
Het |
Prss51 |
T |
A |
14: 64,333,376 (GRCm39) |
V13D |
possibly damaging |
Het |
Qrich2 |
TTGCAACACACCAGGCTGAACTGGACCTTGCTG |
TTG |
11: 116,347,868 (GRCm39) |
|
probably benign |
Het |
Rictor |
C |
T |
15: 6,801,635 (GRCm39) |
S441L |
probably benign |
Het |
Slc2a7 |
T |
C |
4: 150,239,141 (GRCm39) |
I122T |
possibly damaging |
Het |
Spata31e4 |
A |
T |
13: 50,855,817 (GRCm39) |
D485V |
probably damaging |
Het |
Sprr3 |
G |
A |
3: 92,364,415 (GRCm39) |
P143L |
probably benign |
Het |
Sugct |
A |
T |
13: 17,752,104 (GRCm39) |
S181T |
possibly damaging |
Het |
Syne2 |
G |
A |
12: 76,085,697 (GRCm39) |
R141Q |
probably benign |
Het |
Taok1 |
T |
C |
11: 77,428,725 (GRCm39) |
I992V |
probably benign |
Het |
Tbc1d21 |
A |
C |
9: 58,269,306 (GRCm39) |
|
probably null |
Het |
Thada |
T |
C |
17: 84,559,818 (GRCm39) |
D1453G |
probably damaging |
Het |
Thoc5 |
T |
C |
11: 4,852,156 (GRCm39) |
L104S |
probably damaging |
Het |
Tln2 |
T |
G |
9: 67,302,755 (GRCm39) |
Y72S |
probably damaging |
Het |
Tmem98 |
A |
G |
11: 80,705,137 (GRCm39) |
E75G |
probably damaging |
Het |
Tox3 |
A |
G |
8: 90,975,560 (GRCm39) |
L357P |
probably damaging |
Het |
Ubr4 |
T |
C |
4: 139,197,603 (GRCm39) |
V4492A |
unknown |
Het |
Ulk4 |
A |
G |
9: 121,095,578 (GRCm39) |
|
probably null |
Het |
Ush2a |
A |
G |
1: 188,175,603 (GRCm39) |
T1234A |
probably benign |
Het |
Usp53 |
G |
A |
3: 122,742,887 (GRCm39) |
T683I |
probably damaging |
Het |
Vcan |
T |
A |
13: 89,837,442 (GRCm39) |
I2701F |
probably damaging |
Het |
Vmn2r72 |
G |
A |
7: 85,399,834 (GRCm39) |
A405V |
probably damaging |
Het |
Vstm2a |
G |
T |
11: 16,213,040 (GRCm39) |
A142S |
probably damaging |
Het |
Zbtb41 |
A |
G |
1: 139,374,895 (GRCm39) |
D785G |
probably benign |
Het |
Zfp397 |
A |
T |
18: 24,090,129 (GRCm39) |
Q144H |
probably benign |
Het |
Zfp518a |
A |
T |
19: 40,904,249 (GRCm39) |
T1393S |
possibly damaging |
Het |
|
Other mutations in Vmn2r96 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00562:Vmn2r96
|
APN |
17 |
18,804,077 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00563:Vmn2r96
|
APN |
17 |
18,804,077 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00769:Vmn2r96
|
APN |
17 |
18,804,081 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01314:Vmn2r96
|
APN |
17 |
18,803,226 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01983:Vmn2r96
|
APN |
17 |
18,817,527 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02314:Vmn2r96
|
APN |
17 |
18,804,221 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02600:Vmn2r96
|
APN |
17 |
18,817,829 (GRCm39) |
missense |
probably benign |
|
IGL02672:Vmn2r96
|
APN |
17 |
18,818,376 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02750:Vmn2r96
|
APN |
17 |
18,802,851 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03068:Vmn2r96
|
APN |
17 |
18,803,137 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03411:Vmn2r96
|
APN |
17 |
18,806,634 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0316:Vmn2r96
|
UTSW |
17 |
18,802,827 (GRCm39) |
missense |
probably damaging |
1.00 |
R0502:Vmn2r96
|
UTSW |
17 |
18,804,262 (GRCm39) |
missense |
probably benign |
|
R0580:Vmn2r96
|
UTSW |
17 |
18,802,900 (GRCm39) |
missense |
probably damaging |
1.00 |
R0652:Vmn2r96
|
UTSW |
17 |
18,817,830 (GRCm39) |
missense |
probably benign |
0.05 |
R0789:Vmn2r96
|
UTSW |
17 |
18,802,738 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1462:Vmn2r96
|
UTSW |
17 |
18,817,660 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1462:Vmn2r96
|
UTSW |
17 |
18,817,660 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1660:Vmn2r96
|
UTSW |
17 |
18,817,988 (GRCm39) |
missense |
probably benign |
0.00 |
R1755:Vmn2r96
|
UTSW |
17 |
18,802,915 (GRCm39) |
missense |
possibly damaging |
0.50 |
R1843:Vmn2r96
|
UTSW |
17 |
18,818,183 (GRCm39) |
missense |
probably benign |
0.14 |
R1943:Vmn2r96
|
UTSW |
17 |
18,806,664 (GRCm39) |
missense |
probably benign |
0.09 |
R1993:Vmn2r96
|
UTSW |
17 |
18,804,138 (GRCm39) |
missense |
probably damaging |
1.00 |
R2018:Vmn2r96
|
UTSW |
17 |
18,804,263 (GRCm39) |
missense |
probably benign |
|
R2405:Vmn2r96
|
UTSW |
17 |
18,818,102 (GRCm39) |
missense |
probably damaging |
0.96 |
R3977:Vmn2r96
|
UTSW |
17 |
18,817,941 (GRCm39) |
missense |
probably damaging |
1.00 |
R3979:Vmn2r96
|
UTSW |
17 |
18,817,941 (GRCm39) |
missense |
probably damaging |
1.00 |
R4059:Vmn2r96
|
UTSW |
17 |
18,818,339 (GRCm39) |
missense |
probably benign |
0.20 |
R4693:Vmn2r96
|
UTSW |
17 |
18,803,270 (GRCm39) |
missense |
probably benign |
0.03 |
R4709:Vmn2r96
|
UTSW |
17 |
18,803,088 (GRCm39) |
missense |
probably benign |
0.36 |
R4776:Vmn2r96
|
UTSW |
17 |
18,817,770 (GRCm39) |
missense |
probably damaging |
1.00 |
R4882:Vmn2r96
|
UTSW |
17 |
18,817,866 (GRCm39) |
missense |
probably damaging |
1.00 |
R4920:Vmn2r96
|
UTSW |
17 |
18,802,918 (GRCm39) |
missense |
probably benign |
0.07 |
R5143:Vmn2r96
|
UTSW |
17 |
18,804,120 (GRCm39) |
missense |
possibly damaging |
0.65 |
R5301:Vmn2r96
|
UTSW |
17 |
18,817,950 (GRCm39) |
missense |
probably damaging |
0.98 |
R5507:Vmn2r96
|
UTSW |
17 |
18,818,091 (GRCm39) |
missense |
probably damaging |
1.00 |
R6151:Vmn2r96
|
UTSW |
17 |
18,804,221 (GRCm39) |
missense |
probably benign |
0.01 |
R6181:Vmn2r96
|
UTSW |
17 |
18,804,126 (GRCm39) |
missense |
probably benign |
|
R6339:Vmn2r96
|
UTSW |
17 |
18,804,124 (GRCm39) |
missense |
possibly damaging |
0.84 |
R6404:Vmn2r96
|
UTSW |
17 |
18,817,793 (GRCm39) |
missense |
probably damaging |
1.00 |
R6452:Vmn2r96
|
UTSW |
17 |
18,804,117 (GRCm39) |
missense |
probably benign |
0.07 |
R6749:Vmn2r96
|
UTSW |
17 |
18,818,352 (GRCm39) |
missense |
probably damaging |
0.99 |
R6813:Vmn2r96
|
UTSW |
17 |
18,802,116 (GRCm39) |
missense |
probably benign |
0.04 |
R6851:Vmn2r96
|
UTSW |
17 |
18,802,800 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6944:Vmn2r96
|
UTSW |
17 |
18,817,891 (GRCm39) |
missense |
probably benign |
0.16 |
R6949:Vmn2r96
|
UTSW |
17 |
18,818,100 (GRCm39) |
missense |
probably damaging |
1.00 |
R6962:Vmn2r96
|
UTSW |
17 |
18,818,283 (GRCm39) |
missense |
probably damaging |
0.99 |
R6990:Vmn2r96
|
UTSW |
17 |
18,804,082 (GRCm39) |
missense |
probably benign |
|
R7149:Vmn2r96
|
UTSW |
17 |
18,817,989 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7346:Vmn2r96
|
UTSW |
17 |
18,803,029 (GRCm39) |
missense |
probably benign |
0.15 |
R7385:Vmn2r96
|
UTSW |
17 |
18,803,302 (GRCm39) |
missense |
probably damaging |
1.00 |
R7442:Vmn2r96
|
UTSW |
17 |
18,793,662 (GRCm39) |
missense |
probably benign |
0.02 |
R7509:Vmn2r96
|
UTSW |
17 |
18,802,995 (GRCm39) |
missense |
probably benign |
0.02 |
R7652:Vmn2r96
|
UTSW |
17 |
18,793,832 (GRCm39) |
missense |
probably benign |
|
R7659:Vmn2r96
|
UTSW |
17 |
18,793,749 (GRCm39) |
missense |
probably benign |
0.00 |
R7855:Vmn2r96
|
UTSW |
17 |
18,818,130 (GRCm39) |
missense |
possibly damaging |
0.59 |
R8166:Vmn2r96
|
UTSW |
17 |
18,802,744 (GRCm39) |
missense |
probably damaging |
1.00 |
R8260:Vmn2r96
|
UTSW |
17 |
18,804,243 (GRCm39) |
missense |
probably benign |
0.04 |
R8323:Vmn2r96
|
UTSW |
17 |
18,803,023 (GRCm39) |
missense |
probably damaging |
0.99 |
R8787:Vmn2r96
|
UTSW |
17 |
18,818,250 (GRCm39) |
missense |
probably damaging |
1.00 |
R8837:Vmn2r96
|
UTSW |
17 |
18,802,888 (GRCm39) |
missense |
probably benign |
|
R8933:Vmn2r96
|
UTSW |
17 |
18,804,241 (GRCm39) |
missense |
probably benign |
0.11 |
R9306:Vmn2r96
|
UTSW |
17 |
18,803,226 (GRCm39) |
missense |
probably benign |
0.00 |
R9481:Vmn2r96
|
UTSW |
17 |
18,793,621 (GRCm39) |
start gained |
probably benign |
|
R9626:Vmn2r96
|
UTSW |
17 |
18,793,758 (GRCm39) |
missense |
probably benign |
0.14 |
R9629:Vmn2r96
|
UTSW |
17 |
18,803,257 (GRCm39) |
missense |
probably benign |
0.15 |
Z1088:Vmn2r96
|
UTSW |
17 |
18,817,628 (GRCm39) |
missense |
possibly damaging |
0.86 |
Z1177:Vmn2r96
|
UTSW |
17 |
18,818,376 (GRCm39) |
missense |
probably benign |
0.02 |
|
Predicted Primers |
PCR Primer
(F):5'- GCTTTTCAGTGTATGACCTTCAAAA -3'
(R):5'- GTCATCCAATATCAGTATTGTCACTAG -3'
Sequencing Primer
(F):5'- AGTCAGTGTGCAGTGAGA -3'
(R):5'- AATGGCTGTTTGACCTATTTCAAGG -3'
|
Posted On |
2019-11-26 |