Mutagenetix > Incidental Mutation

Incidental Mutation 'R7821:Wdcp'

601884

Institutional Source

Beutler Lab

Gene Symbol

Wdcp

Ensembl Gene

ENSMUSG00000051721

Gene Name

WD repeat and coiled coil containing

Synonyms

BC068281

MMRRC Submission

045875-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.707) question?

Stock #

R7821 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

4893303-4910043 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 4907975 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Serine at position 694 (N694S)

Ref Sequence

ENSEMBL: ENSMUSP00000152571 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000085790] [ENSMUST00000085793] [ENSMUST00000220215] [ENSMUST00000223551]

AlphaFold

Q6NV72

Predicted Effect

probably benign
Transcript: ENSMUST00000085790

SMART Domains

Protein: ENSMUSP00000082945
Gene: ENSMUSG00000037336

Domain	Start	End	E-Value	Type
Pfam:MFS_2	32	346	2.2e-56	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000085793

SMART Domains

Protein: ENSMUSP00000082948
Gene: ENSMUSG00000051721

Domain	Start	End	E-Value	Type
Pfam:DUF4613	2	643	2.4e-280	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000220215

Predicted Effect

probably benign
Transcript: ENSMUST00000223551
AA Change: N694S

PolyPhen 2 Score 0.072 (Sensitivity: 0.94; Specificity: 0.84)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

98% (61/62)

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aass	T	A	6: 23,120,929 (GRCm39)	T112S	probably damaging	Het
Abca12	G	T	1: 71,298,950 (GRCm39)	S2320R	probably benign	Het
Abca7	TGGTGCGTGAG	TG	10: 79,838,424 (GRCm39)		probably benign	Het
Adh7	T	A	3: 137,932,136 (GRCm39)	I250N	probably damaging	Het
Albfm1	T	C	5: 90,740,747 (GRCm39)	V560A	possibly damaging	Het
Aoc1	T	A	6: 48,882,745 (GRCm39)	I229N	probably damaging	Het
C2cd6	A	T	1: 59,106,951 (GRCm39)	Y291*	probably null	Het
Cacnb4	T	C	2: 52,324,520 (GRCm39)	D514G	possibly damaging	Het
Ccdc202	A	G	14: 96,119,486 (GRCm39)	Q81R	possibly damaging	Het
Clec2g	A	G	6: 128,925,740 (GRCm39)	T50A	probably benign	Het
Col6a5	T	C	9: 105,741,458 (GRCm39)	E2487G	probably damaging	Het
D130040H23Rik	A	T	8: 69,752,887 (GRCm39)		probably null	Het
D6Ertd527e	G	A	6: 87,087,879 (GRCm39)	S14N	unknown	Het
Dchs1	G	A	7: 105,414,352 (GRCm39)	T821I	probably benign	Het
Dhcr24	T	C	4: 106,428,633 (GRCm39)	S138P	possibly damaging	Het
Dhrs9	G	A	2: 69,224,782 (GRCm39)	G157R	probably damaging	Het
Dnah5	T	A	15: 28,411,678 (GRCm39)	D3682E	possibly damaging	Het
Dst	T	C	1: 34,314,443 (GRCm39)		probably null	Het
Fat1	A	T	8: 45,403,261 (GRCm39)	H4L	probably benign	Het
Flnb	A	G	14: 7,939,113 (GRCm38)	I2319V	probably benign	Het
Foxe1	T	C	4: 46,344,578 (GRCm39)	W129R	probably damaging	Het
Foxred2	G	A	15: 77,827,550 (GRCm39)	P603L	probably benign	Het
Fshr	A	G	17: 89,293,641 (GRCm39)	S346P	probably damaging	Het
Galnt2	T	A	8: 125,070,134 (GRCm39)	S550R	possibly damaging	Het
Gpc2	A	G	5: 138,274,559 (GRCm39)	S312P	probably benign	Het
Gpr150	C	A	13: 76,204,511 (GRCm39)	A145S	probably benign	Het
Grk4	T	A	5: 34,867,553 (GRCm39)	W173R	probably damaging	Het
Hoxb9	C	G	11: 96,162,537 (GRCm39)	P57R	probably damaging	Het
Hsf5	A	G	11: 87,528,954 (GRCm39)	Q563R	probably benign	Het
Ighv1-58	A	G	12: 115,275,796 (GRCm39)	F114S	possibly damaging	Het
Klra9	T	A	6: 130,162,563 (GRCm39)	I158F	probably damaging	Het
Lrrc8d	T	C	5: 105,960,210 (GRCm39)	S207P	probably damaging	Het
Nbeal2	T	C	9: 110,459,320 (GRCm39)	E1929G	probably damaging	Het
Ncoa1	A	G	12: 4,346,221 (GRCm39)	M89T	probably benign	Het
Nkx2-4	T	C	2: 146,927,208 (GRCm39)	I20V	probably benign	Het
Nup214	T	C	2: 31,916,917 (GRCm39)	S1191P	possibly damaging	Het
Or2n1d	A	G	17: 38,646,855 (GRCm39)	D269G	probably benign	Het
Pfkp	T	A	13: 6,647,908 (GRCm39)	N556I	probably damaging	Het
Pidd1	A	T	7: 141,022,193 (GRCm39)	S199T	probably benign	Het
Pik3r2	T	A	8: 71,222,408 (GRCm39)	I515F	probably damaging	Het
Plcxd2	T	A	16: 45,785,524 (GRCm39)	I294F	probably damaging	Het
Prmt6	C	A	3: 110,158,303 (GRCm39)		probably benign	Het
Prpf8	A	G	11: 75,385,300 (GRCm39)	I812V	probably benign	Het
Rasa2	T	C	9: 96,462,537 (GRCm39)		probably null	Het
Rsad1	A	C	11: 94,435,288 (GRCm39)	D266E	probably benign	Het
Rsf1	GGCG	GGCGACGGCTGCG	7: 97,229,113 (GRCm39)		probably benign	Het
Shroom3	T	A	5: 93,088,705 (GRCm39)	V485E	probably damaging	Het
Siae	T	A	9: 37,556,196 (GRCm39)	Y451N	probably damaging	Het
Slc7a11	A	T	3: 50,335,476 (GRCm39)	I354N	probably damaging	Het
Spryd7	A	T	14: 61,783,129 (GRCm39)		probably null	Het
Srcap	A	G	7: 127,129,499 (GRCm39)		probably benign	Het
Svep1	T	A	4: 58,179,601 (GRCm39)	D214V	probably damaging	Het
Tmtc4	T	C	14: 123,209,289 (GRCm39)	I119V	probably benign	Het
Trim5	G	A	7: 103,927,633 (GRCm39)	T169I	probably benign	Het
Ttc33	T	C	15: 5,241,506 (GRCm39)	F83S	probably benign	Het
Ubr5	A	T	15: 37,997,431 (GRCm39)	S1741T	probably damaging	Het
Vmn2r111	T	C	17: 22,778,032 (GRCm39)	N549S	possibly damaging	Het
Zfp174	T	A	16: 3,666,041 (GRCm39)	I102N	probably damaging	Het
Zfp354a	T	C	11: 50,960,539 (GRCm39)	F248S	probably damaging	Het
Zfyve26	A	T	12: 79,302,098 (GRCm39)	C404S	probably damaging	Het
Zmynd8	A	T	2: 165,723,000 (GRCm39)		probably benign	Het

Other mutations in Wdcp

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00770:Wdcp	APN	12	4,905,303 (GRCm39)	missense	probably damaging	1.00
IGL00774:Wdcp	APN	12	4,905,303 (GRCm39)	missense	probably damaging	1.00
IGL02327:Wdcp	APN	12	4,901,115 (GRCm39)	missense	possibly damaging	0.95
IGL02725:Wdcp	APN	12	4,901,206 (GRCm39)	missense	probably damaging	1.00
IGL03377:Wdcp	APN	12	4,900,691 (GRCm39)	nonsense	probably null
IGL03381:Wdcp	APN	12	4,901,926 (GRCm39)	missense	probably damaging	1.00
R0152:Wdcp	UTSW	12	4,901,583 (GRCm39)	missense	probably benign	0.06
R0317:Wdcp	UTSW	12	4,901,583 (GRCm39)	missense	probably benign	0.06
R1077:Wdcp	UTSW	12	4,900,685 (GRCm39)	missense	probably damaging	1.00
R1136:Wdcp	UTSW	12	4,901,655 (GRCm39)	missense	possibly damaging	0.78
R1571:Wdcp	UTSW	12	4,901,924 (GRCm39)	nonsense	probably null
R1653:Wdcp	UTSW	12	4,901,815 (GRCm39)	missense	probably damaging	1.00
R1848:Wdcp	UTSW	12	4,900,245 (GRCm39)	missense	possibly damaging	0.86
R4091:Wdcp	UTSW	12	4,905,279 (GRCm39)	missense	probably null	0.00
R5126:Wdcp	UTSW	12	4,900,617 (GRCm39)	missense	probably damaging	0.98
R6148:Wdcp	UTSW	12	4,900,621 (GRCm39)	missense	possibly damaging	0.74
R6529:Wdcp	UTSW	12	4,901,143 (GRCm39)	missense	probably damaging	1.00
R6800:Wdcp	UTSW	12	4,901,358 (GRCm39)	missense	probably damaging	1.00
R7432:Wdcp	UTSW	12	4,900,246 (GRCm39)	missense	probably damaging	1.00
R8182:Wdcp	UTSW	12	4,901,850 (GRCm39)	missense	probably damaging	1.00
R8553:Wdcp	UTSW	12	4,902,024 (GRCm39)	intron	probably benign
R8845:Wdcp	UTSW	12	4,901,439 (GRCm39)	missense	probably benign	0.26
R9134:Wdcp	UTSW	12	4,901,533 (GRCm39)	nonsense	probably null
R9609:Wdcp	UTSW	12	4,900,258 (GRCm39)	missense	probably damaging	0.98
U24488:Wdcp	UTSW	12	4,900,405 (GRCm39)	missense	probably damaging	1.00
X0026:Wdcp	UTSW	12	4,901,077 (GRCm39)	nonsense	probably null
Z1088:Wdcp	UTSW	12	4,900,825 (GRCm39)	missense	probably damaging	1.00
Z1176:Wdcp	UTSW	12	4,901,785 (GRCm39)	missense	possibly damaging	0.95

Predicted Primers

PCR Primer
(F):5'- GACGTGCTCTGTTCTTAATTGC -3'
(R):5'- CTATATGCCCATGCGGTGTTG -3'

Sequencing Primer
(F):5'- TAATTGCCTTTGTAGACTCCCACTGG -3'
(R):5'- GCTGTTTCAGTCTTAGAACTTTGTC -3'

Posted On

2019-12-03