Mutagenetix > Incidental Mutation

Incidental Mutation 'RF002:Iqcm'

602565

Institutional Source

Beutler Lab

Gene Symbol

Iqcm

Ensembl Gene

ENSMUSG00000031620

Gene Name

IQ motif containing M

Synonyms

1700007B14Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.065) question?

Stock #

RF002 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

76175322-76711131 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 76304527 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Isoleucine at position 96 (T96I)

Ref Sequence

ENSEMBL: ENSMUSP00000034033 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000034033] [ENSMUST00000121983] [ENSMUST00000212704]

AlphaFold

Q149I8

Predicted Effect

probably benign
Transcript: ENSMUST00000034033
AA Change: T96I

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000034033
Gene: ENSMUSG00000031620
AA Change: T96I

Domain	Start	End	E-Value	Type
IQ	281	303	2.54e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000121983
AA Change: T96I

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000112901
Gene: ENSMUSG00000031620
AA Change: T96I

Domain	Start	End	E-Value	Type
IQ	281	303	2.54e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000212704
AA Change: T96I

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 99.4%
20x: 98.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
AI837181	CGG	CGGTGG	19: 5,475,262 (GRCm39)		probably benign	Het
AI837181	GGC	GGCTGC	19: 5,475,263 (GRCm39)		probably benign	Het
Angptl1	A	T	1: 156,684,794 (GRCm39)	Q321L	possibly damaging	Het
AY358078	T	TAGGATAATGC	14: 52,043,050 (GRCm39)		probably null	Het
Blm	CCTCCTCCTCCTCCTCCTCCTCCT	CCTCCTCCTCCTGCTCCTCCTCCTCCTCCTCCTCCT	7: 80,162,653 (GRCm39)		probably benign	Het
Blm	CTC	CTCATCCTCCTCATC	7: 80,162,675 (GRCm39)		probably benign	Het
Car13	T	C	3: 14,719,974 (GRCm39)	Y129H	probably damaging	Het
Cd109	TTATTTATTTAT	TTATTTATTTATGTATTTATTTAT	9: 78,619,805 (GRCm39)		probably benign	Het
Cd109	TATTTAT	TATTTATTTATTCATTTAT	9: 78,619,810 (GRCm39)		probably benign	Het
Cdh26	T	C	2: 178,108,424 (GRCm39)	C341R	probably damaging	Het
Chga	GCA	GCACCA	12: 102,527,680 (GRCm39)		probably benign	Het
Col11a1	A	T	3: 114,010,650 (GRCm39)	I1689L	unknown	Het
Dnah6	T	G	6: 73,078,872 (GRCm39)	S2364R	probably benign	Het
E4f1	CCG	CCGACG	17: 24,674,160 (GRCm39)		probably benign	Het
Fah	A	C	7: 84,238,836 (GRCm39)	N336K	probably damaging	Het
Fbxo11	A	T	17: 88,303,481 (GRCm39)	I664K		Het
Fcgbp	A	G	7: 27,789,180 (GRCm39)	D582G	probably benign	Het
Gabre	C	CCGGCTA	X: 71,313,663 (GRCm39)		probably null	Het
Garin5a	CCTGGGTCTGAGGGAGGA	CCTGGGTCTGAGGGAGGAAGGCTGGATCCTGGATAACTGGGTCTGAGGGAGGA	7: 44,149,944 (GRCm39)		probably null	Het
Gm1110	A	G	9: 26,831,936 (GRCm39)	Y72H	probably damaging	Het
Inpp5e	C	T	2: 26,298,389 (GRCm39)	A71T	possibly damaging	Het
Lce1m	TGCCACCGCTGC	TGCCACCGCTGCCGCCACCGCTGC	3: 92,925,590 (GRCm39)		probably benign	Het
Lce1m	AC	ACCGCCGCTGCCCC	3: 92,925,606 (GRCm39)		probably benign	Het
Lrch1	TTGGTGGTGCTGGTGG	TTGGTGG	14: 75,185,014 (GRCm39)		probably benign	Het
Lyst	A	G	13: 13,808,948 (GRCm39)	D206G	probably benign	Het
Map4k5	A	T	12: 69,903,630 (GRCm39)	D58E	probably damaging	Het
Mapkapk2	A	G	1: 130,984,250 (GRCm39)	S251P	probably damaging	Het
Mcph1	CCTG	CCTGCTG	8: 18,702,545 (GRCm39)		probably benign	Het
Men1	T	C	19: 6,390,146 (GRCm39)	S600P	probably damaging	Het
Mllt1	C	T	17: 57,203,300 (GRCm39)	V394M	probably benign	Het
Mllt1	C	A	17: 57,203,301 (GRCm39)	M393I	possibly damaging	Het
Nacc1	T	C	8: 85,402,848 (GRCm39)	E315G	possibly damaging	Het
Nefh	GGGGACTTGGCCTC	GGGGACTTGGCCTCACCTAGGGACTTGGCCTC	11: 4,891,047 (GRCm39)		probably benign	Het
Nefh	GACTTGGCCTC	GACTTGGCCTCACCTGGGGACTTGGCCTC	11: 4,891,050 (GRCm39)		probably benign	Het
Nid2	TAACACCGCCA	TA	14: 19,801,434 (GRCm39)		probably benign	Het
Or5b122	T	A	19: 13,563,415 (GRCm39)	I206N	probably damaging	Het
Parp2	A	G	14: 51,054,843 (GRCm39)	E262G	probably damaging	Het
Pdik1l	TTT	TTTGTTTTTGTGTT	4: 134,006,686 (GRCm39)		probably null	Het
Pop1	G	A	15: 34,502,583 (GRCm39)	G90D	probably damaging	Het
Ppp3cc	T	C	14: 70,504,788 (GRCm39)	T73A	possibly damaging	Het
Prdm15	C	T	16: 97,600,829 (GRCm39)	D810N	probably damaging	Het
Prpf4b	T	A	13: 35,068,219 (GRCm39)	S349R	unknown	Het
Rassf6	TCCTGTAGAGCAATGGGGATTC	TCCTGTAGAGCAATGGGGATTCTGCCTCACTCATGGGCCTGTAGAGCAATGGGGATTC	5: 90,756,780 (GRCm39)		probably benign	Het
Rassf6	GTAGAGCAATGGGGATTC	GTAGAGCAATGGGGATTCTGCCTCACTCATGGTCCTTTAGAGCAATGGGGATTC	5: 90,756,784 (GRCm39)		probably null	Het
Sdk2	T	C	11: 113,776,078 (GRCm39)	E208G	probably benign	Het
Smurf2	G	T	11: 106,743,413 (GRCm39)	P211Q	probably benign	Het
Snx25	C	A	8: 46,569,218 (GRCm39)		probably null	Het
Spata6	T	A	4: 111,685,502 (GRCm39)	M469K	probably benign	Het
Spta1	G	T	1: 174,058,926 (GRCm39)	A1954S	possibly damaging	Het
Sry	CTGGTCGTGGAACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTCATGGAACTGCTG	CTGGTCATGGAACTGCTG	Y: 2,662,564 (GRCm39)		probably benign	Het
Stard8	GAG	GAGTAG	X: 98,110,121 (GRCm39)		probably null	Het
Tfeb	AGC	AGCGGC	17: 48,097,027 (GRCm39)		probably benign	Het
Tlcd1	T	A	11: 78,071,020 (GRCm39)	L203Q	probably benign	Het
Tlr11	T	C	14: 50,598,682 (GRCm39)	F223L	possibly damaging	Het
Usp48	T	A	4: 137,333,106 (GRCm39)	V100D	probably damaging	Het
Vinac1	A	G	2: 128,880,714 (GRCm39)	F404S		Het
Vmn2r56	G	A	7: 12,428,757 (GRCm39)	T503I	probably benign	Het
Vps18	T	C	2: 119,127,871 (GRCm39)	L898P	probably damaging	Het
Zfp384	GCCCAGGCCCAGGCCCAGGCCCAG	GCCCAGGCCCAGTCCCAGGCCCAGGCCCAGGCCCAG	6: 125,013,434 (GRCm39)		probably benign	Het
Zfp706	T	A	15: 37,003,949 (GRCm39)	Y39F	probably benign	Het
Zhx3	T	A	2: 160,623,726 (GRCm39)	N147I	probably damaging	Het

Other mutations in Iqcm

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01895:Iqcm	APN	8	76,615,188 (GRCm39)	missense	probably damaging	1.00
IGL02835:Iqcm	APN	8	76,281,511 (GRCm39)	utr 5 prime	probably benign
R0056:Iqcm	UTSW	8	76,480,014 (GRCm39)	missense	probably benign
R2146:Iqcm	UTSW	8	76,615,241 (GRCm39)	missense	probably damaging	1.00
R2910:Iqcm	UTSW	8	76,441,404 (GRCm39)	missense	probably benign
R3801:Iqcm	UTSW	8	76,396,021 (GRCm39)	missense	possibly damaging	0.59
R3804:Iqcm	UTSW	8	76,396,021 (GRCm39)	missense	possibly damaging	0.59
R3834:Iqcm	UTSW	8	76,304,380 (GRCm39)	missense	possibly damaging	0.93
R3897:Iqcm	UTSW	8	76,480,028 (GRCm39)	missense	probably damaging	1.00
R4447:Iqcm	UTSW	8	76,356,394 (GRCm39)	missense	probably damaging	0.97
R4448:Iqcm	UTSW	8	76,356,394 (GRCm39)	missense	probably damaging	0.97
R4450:Iqcm	UTSW	8	76,356,394 (GRCm39)	missense	probably damaging	0.97
R4687:Iqcm	UTSW	8	76,489,617 (GRCm39)	missense	probably damaging	1.00
R4810:Iqcm	UTSW	8	76,615,281 (GRCm39)	missense	probably damaging	1.00
R4845:Iqcm	UTSW	8	76,472,980 (GRCm39)	missense	probably damaging	0.99
R4856:Iqcm	UTSW	8	76,615,228 (GRCm39)	missense	possibly damaging	0.95
R4886:Iqcm	UTSW	8	76,615,228 (GRCm39)	missense	possibly damaging	0.95
R5063:Iqcm	UTSW	8	76,472,914 (GRCm39)	missense	probably damaging	1.00
R5460:Iqcm	UTSW	8	76,441,417 (GRCm39)	missense	probably benign
R6403:Iqcm	UTSW	8	76,304,624 (GRCm39)	critical splice donor site	probably null
R6667:Iqcm	UTSW	8	76,479,980 (GRCm39)	missense	probably damaging	1.00
R7187:Iqcm	UTSW	8	76,480,044 (GRCm39)	missense	probably benign	0.22
R7263:Iqcm	UTSW	8	76,489,701 (GRCm39)	missense	probably benign
R7701:Iqcm	UTSW	8	76,281,539 (GRCm39)	missense	probably benign	0.02
R7916:Iqcm	UTSW	8	76,304,578 (GRCm39)	missense	probably benign
R7938:Iqcm	UTSW	8	76,304,596 (GRCm39)	missense	probably benign
R7974:Iqcm	UTSW	8	76,281,520 (GRCm39)	start codon destroyed	probably null	0.66
R8039:Iqcm	UTSW	8	76,489,733 (GRCm39)	missense	probably damaging	1.00
R8311:Iqcm	UTSW	8	76,480,118 (GRCm39)	splice site	probably benign
R8703:Iqcm	UTSW	8	76,615,271 (GRCm39)	missense	probably damaging	1.00
R9175:Iqcm	UTSW	8	76,710,867 (GRCm39)	missense	possibly damaging	0.84
R9475:Iqcm	UTSW	8	76,480,083 (GRCm39)	missense	probably damaging	1.00
X0018:Iqcm	UTSW	8	76,710,840 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- TATAGAATAAGGCTCAAGGAACGTC -3'
(R):5'- CTTAGAAGCTCCAGGTACCATC -3'

Sequencing Primer
(F):5'- GCTCAAGGAACGTCTATAGATGTC -3'
(R):5'- AGTTCTAGATACCATCTGAACCAG -3'

Posted On

2019-12-04