Mutagenetix > Incidental Mutation

Incidental Mutation 'RF028:Zfp933'

604224

Institutional Source

Beutler Lab

Gene Symbol

Zfp933

Ensembl Gene

ENSMUSG00000059423

Gene Name

zinc finger protein 933

Synonyms

2810408P10Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.070) question?

Stock #

RF028 (G1)

Quality Score

217.479

Status

Not validated

Chromosome

Chromosomal Location

147907443-147932823 bp(-) (GRCm39)

Type of Mutation

frame shift

DNA Base Change (assembly)

TT to TTTGCCT at 147910188 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000101343 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000105718] [ENSMUST00000135798]

AlphaFold

Q6PEE4

Predicted Effect

probably null
Transcript: ENSMUST00000105718

SMART Domains

Protein: ENSMUSP00000101343
Gene: ENSMUSG00000059423

Domain	Start	End	E-Value	Type
KRAB	4	66	9.49e-16	SMART
ZnF_C2H2	131	153	3.21e-4	SMART
ZnF_C2H2	159	181	5.21e-4	SMART
ZnF_C2H2	187	209	2.12e-4	SMART
ZnF_C2H2	215	237	7.26e-3	SMART
ZnF_C2H2	243	265	6.88e-4	SMART
ZnF_C2H2	271	293	1.13e-4	SMART
ZnF_C2H2	299	321	3.95e-4	SMART
ZnF_C2H2	327	349	1.56e-2	SMART
ZnF_C2H2	355	377	1.79e-2	SMART
ZnF_C2H2	383	405	4.24e-4	SMART
ZnF_C2H2	411	433	1.22e-4	SMART
ZnF_C2H2	439	461	4.79e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000116174

Predicted Effect

probably benign
Transcript: ENSMUST00000135798

SMART Domains

Protein: ENSMUSP00000118300
Gene: ENSMUSG00000059423

Domain	Start	End	E-Value	Type
Blast:KRAB	1	34	8e-18	BLAST
PDB:2I13\|B	32	98	1e-12	PDB
SCOP:d1fgja_	33	98	5e-13	SMART
Blast:PHD	44	98	6e-11	BLAST

Coding Region Coverage

1x: 99.8%
3x: 99.7%
10x: 99.4%
20x: 98.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Predicted Effect	Zygosity
A030005L19Rik	GCTGTG	GCTGTGCCTCCTGTG	1: 82,891,299 (GRCm39)	probably benign	Het
A030005L19Rik	TGTGGCTGC	TGTGGCTGCCGTGGCTGC	1: 82,891,301 (GRCm39)	probably benign	Het
Acap3	TGCATCCTGGGCTGC	TGCATCCTGGGCTGCAGCATCCTGGGCTGC	4: 155,989,548 (GRCm39)	probably benign	Het
Arid1b	C	CGGG	17: 5,045,873 (GRCm39)	probably benign	Het
Blm	CCTCCTCCTCCTCCTCCTCCTCCT	CCTCCTCCTCCTACTCCTCCTCCTCCTCCTCCTCCT	7: 80,162,653 (GRCm39)	probably null	Het
Boc	GAC	G	16: 44,316,796 (GRCm39)	probably null	Het
Cacna1f	GAG	GAGAAG	X: 7,486,299 (GRCm39)	probably benign	Het
Cacna1f	GAG	GAGAAG	X: 7,486,302 (GRCm39)	probably benign	Het
Catsper2	ATCGCTTTCCTCGTTTTCG	ATCG	2: 121,228,207 (GRCm39)	probably benign	Het
Dbr1	GAGGAG	GAGGAGTAGGAG	9: 99,465,750 (GRCm39)	probably null	Het
E4f1	CGC	CGCGGC	17: 24,674,164 (GRCm39)	probably benign	Het
Eps8	TCGCTC	TCGCTCGCTC	6: 137,494,061 (GRCm39)	probably benign	Het
Ermn	AACT	AACTACT	2: 57,938,078 (GRCm39)	probably benign	Het
Fsip2	TAGATGTGAAACCCTTAGAGGTAAGATGTGAAACTCTTAGAGGTAAGA	TAGATGTGAAACTCTTAGAGGTAAGA	2: 82,824,352 (GRCm39)	probably null	Het
Gab3	CTTCTT	CTTATTCTT	X: 74,043,606 (GRCm39)	probably null	Het
Gab3	TCT	TCTGCT	X: 74,043,623 (GRCm39)	probably benign	Het
Gabre	CTC	CTCTGGGTC	X: 71,314,369 (GRCm39)	probably benign	Het
Gm7579	GGCTGTGGCTCCTGTGGGGGCTGCAAGGGAAGCTGTGGCTCCTGTGGGGGCTGCAAGGGAAGCTGTGGCTCCTGTGGGGGATGCAAGGGAGGCTGTGGCTCCTGTGGGGG	GGCTGTGGCTCCTGTGGGGGCTGCAAGGGAAGCTGTGGCTCCTGTGGGGGATGCAAGGGAGGCTGTGGCTCCTGTGGGGG	7: 141,765,782 (GRCm39)	probably benign	Het
Gm8369	TG	TGGGTGAG	19: 11,489,137 (GRCm39)	probably null	Het
Hsdl2	CAGCTGCAG	CAGCTGCAGCAGCAGCCATAGCTGCAG	4: 59,610,650 (GRCm39)	probably null	Het
Iqcf4	TTTTCCTTTT	TTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCGTTTCCTTTT	9: 106,447,813 (GRCm39)	probably benign	Het
Kmt2e	TTT	TTTTATT	5: 23,683,507 (GRCm39)	probably benign	Het
Kri1	CTCCTCCT	C	9: 21,192,367 (GRCm39)	probably null	Het
Krtap28-10	AGCCACAGCCACCACAGCCACAGCCACCAC	AGCCACAGCCACCACCGCCACAGCCACCACAGCCACAGCCACCAC	1: 83,019,979 (GRCm39)	probably benign	Het
Lce1m	GTTGCTGCCACTG	GTTGCTGCCACTGTTGCTGCCACTG	3: 92,925,438 (GRCm39)	probably benign	Het
Loricrin	CGCCGCCT	C	3: 91,989,206 (GRCm39)	probably null	Het
Luzp1	A	AGGTGGCCTCTTCAGG	4: 136,270,507 (GRCm39)	probably benign	Het
Lypd8	CCAACA	CCAACAGGTCCCTCGCCTCTGTTACCCCACAAATAAACAACA	11: 58,281,065 (GRCm39)	probably benign	Het
Mn1	CAG	CAGGAG	5: 111,567,577 (GRCm39)	probably benign	Het
Nefh	GGGACTTGGCCTCACCTGGGGACTTGGCCTCACCTGGGGACTTGGCCTC	GGGACTTGGCCTCACCTGTGGACTTGGCCTCACCTGGGGACTTGGCCTCACCTGGGGACTTGGCCTC	11: 4,891,012 (GRCm39)	probably benign	Het
Nefh	GGGGACTTGGCCTCACCTGGGGACTTGGCCTC	GGGGACTTGGCCTCACCTTGGGACTTGGCCTCACCTGGGGACTTGGCCTC	11: 4,891,029 (GRCm39)	probably benign	Het
Nf2	AAAAG	A	11: 4,779,936 (GRCm39)	probably null	Het
Nusap1	AGAT	AGATCCACGTTAGCAGTGAGGAGCAAGCTGCGAT	2: 119,458,059 (GRCm39)	probably benign	Het
Nusap1	CAGTGAGGAGCAAGCTGAGA	CAGTGAGGAGCAAGCTGAGATACACGTTAGTAGTGAGGAGCAAGCTGAGA	2: 119,458,072 (GRCm39)	probably benign	Het
Phf20	CCCCCC	CCCCCCGCCCCC	2: 156,146,543 (GRCm39)	probably benign	Het
Ppp1r8	TCTCTCTCAC	TC	4: 132,557,926 (GRCm39)	probably benign	Het
Prr5l	GCCTC	G	2: 101,627,918 (GRCm39)	probably null	Het
Rbm12	CGGGACCGGGCATTGCGGGACCGGGCATTGCGGG	CGG	2: 155,938,050 (GRCm39)	probably null	Het
Rpgrip1	GA	GAGTA	14: 52,386,855 (GRCm39)	probably null	Het
Spmap2l	AGCGATCCTCCCCAGTCCCGCAAGGCC	AGCGATCCTCCCCAGTCCCGCAAGGCCCGCGATCCTCCCCAGTCCCGCAAGGCC	5: 77,164,248 (GRCm39)	probably benign	Het
Tanc1	GTGAGCAGAAACCAGCATTTAGAGGGAACCGGTCCCTTCACTGCAGGAA	G	2: 59,673,613 (GRCm39)	probably benign	Het
Tfeb	GCA	GCATCA	17: 48,097,022 (GRCm39)	probably benign	Het
Tgoln1	T	TTGTCTTGTCAGAATCACCTCCTGG	6: 72,593,019 (GRCm39)	probably benign	Het
Tob1	CACA	CACAACA	11: 94,105,277 (GRCm39)	probably benign	Het
Trappc9	GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT	GCTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT	15: 72,673,139 (GRCm39)	probably benign	Het
Triobp	CAGGACT	CAGGACTGCCTGTGCCCAACGGAACAACCCAAGGACT	15: 78,851,239 (GRCm39)	probably benign	Het
Zfhx3	AACAGCAGC	AACAGCAGCTACAGCAGC	8: 109,682,728 (GRCm39)	probably benign	Het

Other mutations in Zfp933

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00576:Zfp933	APN	4	147,910,778 (GRCm39)	missense	probably damaging	1.00
IGL03377:Zfp933	APN	4	147,913,168 (GRCm39)	missense	possibly damaging	0.65
F5770:Zfp933	UTSW	4	147,910,927 (GRCm39)	missense	probably damaging	0.98
FR4340:Zfp933	UTSW	4	147,910,186 (GRCm39)	frame shift	probably null
FR4548:Zfp933	UTSW	4	147,910,188 (GRCm39)	frame shift	probably null
R0388:Zfp933	UTSW	4	147,910,899 (GRCm39)	missense	probably benign	0.35
R0523:Zfp933	UTSW	4	147,910,919 (GRCm39)	nonsense	probably null
R0539:Zfp933	UTSW	4	147,911,005 (GRCm39)	missense	probably benign	0.08
R1672:Zfp933	UTSW	4	147,910,476 (GRCm39)	missense	probably damaging	1.00
R4049:Zfp933	UTSW	4	147,910,969 (GRCm39)	missense	probably damaging	1.00
R4895:Zfp933	UTSW	4	147,910,892 (GRCm39)	nonsense	probably null
R5133:Zfp933	UTSW	4	147,911,321 (GRCm39)	missense	probably benign
R5786:Zfp933	UTSW	4	147,912,864 (GRCm39)	splice site	probably null
R5891:Zfp933	UTSW	4	147,911,231 (GRCm39)	missense	probably benign	0.03
R6111:Zfp933	UTSW	4	147,913,217 (GRCm39)	missense	probably damaging	1.00
R6382:Zfp933	UTSW	4	147,910,325 (GRCm39)	missense	probably benign	0.07
R6968:Zfp933	UTSW	4	147,910,654 (GRCm39)	missense	probably damaging	1.00
R7195:Zfp933	UTSW	4	147,910,636 (GRCm39)	missense	probably benign	0.16
R7555:Zfp933	UTSW	4	147,910,589 (GRCm39)	missense	probably damaging	1.00
R7902:Zfp933	UTSW	4	147,911,058 (GRCm39)	missense	probably damaging	0.96
R8319:Zfp933	UTSW	4	147,912,910 (GRCm39)	missense	possibly damaging	0.87
R8688:Zfp933	UTSW	4	147,911,249 (GRCm39)	missense	probably benign	0.14
R9019:Zfp933	UTSW	4	147,911,021 (GRCm39)	missense	probably damaging	1.00
RF024:Zfp933	UTSW	4	147,910,898 (GRCm39)	missense	probably damaging	1.00
RF035:Zfp933	UTSW	4	147,910,188 (GRCm39)	makesense	probably null
RF043:Zfp933	UTSW	4	147,910,188 (GRCm39)	frame shift	probably null
V7581:Zfp933	UTSW	4	147,910,927 (GRCm39)	missense	probably damaging	0.98
V7582:Zfp933	UTSW	4	147,910,927 (GRCm39)	missense	probably damaging	0.98
V7583:Zfp933	UTSW	4	147,910,927 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- TTTCAGAACCTCAACGACTACTGG -3'
(R):5'- GGACACATACTGGAGAGAAACCTTATG -3'

Sequencing Primer
(F):5'- TCAACGACTACTGGGATCTGCAG -3'
(R):5'- TGTATGTAATCAATGTGGTAAAGCC -3'

Posted On

2019-12-04