Incidental Mutation 'RF042:Las1l'
ID604899
Institutional Source Beutler Lab
Gene Symbol Las1l
Ensembl Gene ENSMUSG00000057421
Gene NameLAS1-like (S. cerevisiae)
Synonyms
Accession Numbers
Is this an essential gene? Not available question?
Stock #RF042 (G1)
Quality Score217.468
Status Not validated
ChromosomeX
Chromosomal Location95935335-95956962 bp(-) (GRCm38)
Type of Mutationsmall insertion (2 aa in frame mutation)
DNA Base Change (assembly) CTTCCT to CTTCCTTTTCCT at 95940620 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000109495 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000079987] [ENSMUST00000113864]
Predicted Effect probably benign
Transcript: ENSMUST00000079987
SMART Domains Protein: ENSMUSP00000078901
Gene: ENSMUSG00000057421

DomainStartEndE-ValueType
Pfam:Las1 27 173 1e-45 PFAM
low complexity region 183 205 N/A INTRINSIC
coiled coil region 522 609 N/A INTRINSIC
low complexity region 724 738 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000113864
SMART Domains Protein: ENSMUSP00000109495
Gene: ENSMUSG00000057421

DomainStartEndE-ValueType
Pfam:Las1 28 172 6e-45 PFAM
low complexity region 183 205 N/A INTRINSIC
coiled coil region 539 626 N/A INTRINSIC
low complexity region 741 755 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.8%
  • 3x: 99.7%
  • 10x: 99.4%
  • 20x: 98.8%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5430401F13Rik AAAGGAAAAGGTGGCCAG AAAGGAAAAGGTGGCCAGCAAAAACAGGAAGGAAAAGGTGGCCAG 6: 131,552,886 probably benign Het
A030005L19Rik GCTGCTG GCTGCTGTGACTGCTG 1: 82,913,584 probably benign Het
AI837181 GGC GGCTGC 19: 5,425,217 probably benign Het
AI837181 CG CGGTG 19: 5,425,237 probably benign Het
Anapc2 GCGGCGGCGGCGAC GC 2: 25,272,561 probably benign Het
Cgnl1 AGCG AGCGGCG 9: 71,724,715 probably benign Het
Cntnap1 TTT TTTTGTT 11: 101,180,305 probably benign Het
Cul9 TTCTC TTC 17: 46,540,615 probably null Het
Dnmt1 GGGGCGGAGCACAGTTCCTACCTCGTT GGGGCGGAGCACAGTTCCTACCTCGTTTTGTGGGCGGAGCACAGTTCCTACCTCGTT 9: 20,910,119 probably null Het
Frem3 GATC GATCATC 8: 80,615,238 probably benign Het
Gab3 TCT TCTACT X: 75,000,005 probably benign Het
Gab3 TTC TTCGTC X: 75,000,022 probably benign Het
Gabre GGCTCC GGCTCCTGCTCC X: 72,270,047 probably benign Het
Gm8369 TGTG TGTGAGTG 19: 11,511,773 probably null Het
Gm8369 GTGTGT GTGTGTTTGTGT 19: 11,511,778 probably benign Het
Gykl1 G A 18: 52,694,416 R232Q probably benign Het
Igkv12-89 G GCAACGCCAT 6: 68,835,286 probably benign Het
Iqcf4 TCCTTTTCCTTTTCCTTTT TCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTGCCTTTTCCTTTTCCTTTT 9: 106,570,605 probably benign Het
Kmt2e TTT TTTTCTT 5: 23,478,509 probably benign Het
Krtap28-10 CCACAG CCACAGACACAG 1: 83,042,125 probably benign Het
Lca5l GCCCTGGCCCTGGCCCC GCCC 16: 96,159,297 probably null Het
Lce1m CACTGCTGCTGC CACTGCTGCTGCAACTGCTGCTGC 3: 93,018,139 probably benign Het
Lypd8 CA CAGTTCCCTCGCCTCTGTTACCCCACAAATCACCAATA 11: 58,390,243 probably benign Het
Mamld1 GCAACA GCAACAACA X: 71,118,812 probably benign Het
Mamld1 A AGCC X: 71,118,853 probably benign Het
Map1a T TTGCTCCACCTCCAGCTCCAGCTCCAGCTCC 2: 121,306,287 probably benign Het
Med12l GCAACA GCAACAACA 3: 59,275,956 probably benign Het
Med12l AGC AGCGGC 3: 59,275,967 probably benign Het
Med12l CAG CAGAAG 3: 59,275,981 probably benign Het
Med12l GC GCATC 3: 59,275,995 probably benign Het
Morn4 GCAGTGAG GCAGTGAGTCAGTCAGTGAG 19: 42,076,111 probably null Het
Nusap1 GAGA GAGATACACGTTAGCAGTGAGGAGCAAGCTTAGA 2: 119,627,607 probably null Het
Opa3 GCGGGC GCGGGCGGAGCTGCGGGCGGAGCTGCGGGCGGAGCTACGGGC 7: 19,255,669 probably benign Het
Pdia4 CTCTTCCTCCT C 6: 47,808,306 probably null Het
Reep1 CGCCA CGCCAGCCA 6: 71,707,966 probably null Het
Sbp AAGA AAGACGCTGACAACAGAGA 17: 23,945,384 probably benign Het
Sfswap CTCGGCCCA CTCGGCCCAGTCGGCCCA 5: 129,569,743 probably benign Het
Slc39a4 TC TCATCATGATCACCATGGTCACCATGATCACTGTGGCC 15: 76,614,871 probably benign Het
Srpk2 ATCCT AT 5: 23,525,575 probably benign Het
Tfeb GCA GCACCA 17: 47,786,097 probably benign Het
Tgoln1 T TCACCTCCCGTGGGCTTGCCAGAAG 6: 72,616,074 probably benign Het
Tob1 CACA CACAACA 11: 94,214,451 probably benign Het
Trappc9 A AGCTGCTGCTGCTGCT 15: 72,801,283 probably benign Het
Tsen2 GGA GGATGA 6: 115,560,067 probably benign Het
Zfhx3 GC GCCACAGCAAC 8: 108,956,088 probably benign Het
Zfhx3 CAGCAGCA CAGCAGCAAAAGCAGCA 8: 108,956,098 probably benign Het
Other mutations in Las1l
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02049:Las1l APN X 95937453 missense probably benign 0.04
IGL02152:Las1l APN X 95953302 missense probably damaging 1.00
IGL02864:Las1l APN X 95947840 missense possibly damaging 0.78
FR4304:Las1l UTSW X 95940820 small insertion probably benign
FR4304:Las1l UTSW X 95940821 small insertion probably benign
FR4340:Las1l UTSW X 95940622 small insertion probably benign
FR4449:Las1l UTSW X 95940832 small insertion probably benign
FR4548:Las1l UTSW X 95940625 small insertion probably benign
FR4548:Las1l UTSW X 95940823 small insertion probably benign
FR4589:Las1l UTSW X 95940619 small insertion probably benign
FR4589:Las1l UTSW X 95940621 small deletion probably benign
FR4589:Las1l UTSW X 95940625 small insertion probably benign
FR4737:Las1l UTSW X 95940821 small insertion probably benign
FR4737:Las1l UTSW X 95940827 small insertion probably benign
FR4737:Las1l UTSW X 95940829 small insertion probably benign
FR4976:Las1l UTSW X 95940827 small insertion probably benign
FR4976:Las1l UTSW X 95940832 small insertion probably benign
FR4976:Las1l UTSW X 95940833 small insertion probably benign
R1400:Las1l UTSW X 95946900 missense possibly damaging 0.88
RF003:Las1l UTSW X 95940816 small insertion probably benign
RF008:Las1l UTSW X 95940816 small insertion probably benign
RF014:Las1l UTSW X 95940657 small deletion probably benign
RF025:Las1l UTSW X 95940620 nonsense probably null
Predicted Primers PCR Primer
(F):5'- TCCCTGTGCAAGAGAGAAGG -3'
(R):5'- CACACTGGATACCTTACATGAGGAC -3'

Sequencing Primer
(F):5'- GAGAGAAGGCCCCCACTTC -3'
(R):5'- GGATACCTTACATGAGGACCTACAAC -3'
Posted On2019-12-04