Incidental Mutation 'RF043:Ptms'
ID 604914
Institutional Source Beutler Lab
Gene Symbol Ptms
Ensembl Gene ENSMUSG00000030122
Gene Name parathymosin
Synonyms 2610009E16Rik
Accession Numbers
Essential gene? Not available question?
Stock # RF043 (G1)
Quality Score 214.458
Status Not validated
Chromosome 6
Chromosomal Location 124890638-124894909 bp(-) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) TCCTCCTC to TCCTCCTCCTC at 124891411 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000032217 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000032216] [ENSMUST00000032217]
AlphaFold Q9D0J8
Predicted Effect probably benign
Transcript: ENSMUST00000032216
SMART Domains Protein: ENSMUSP00000032216
Gene: ENSMUSG00000030122

DomainStartEndE-ValueType
Pfam:Prothymosin 2 98 1e-17 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000032217
SMART Domains Protein: ENSMUSP00000032217
Gene: ENSMUSG00000030124

DomainStartEndE-ValueType
signal peptide 1 23 N/A INTRINSIC
IG 29 163 1.3e-2 SMART
IG 170 254 6.51e-3 SMART
IG 261 345 4.96e-8 SMART
Blast:IG_like 348 421 2e-28 BLAST
transmembrane domain 443 465 N/A INTRINSIC
low complexity region 492 521 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.8%
  • 3x: 99.7%
  • 10x: 99.4%
  • 20x: 98.7%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Anapc2 GCGGCGGCGGCGAC GC 2: 25,162,573 (GRCm39) probably benign Het
Ankhd1 CGGCGG CGGCGGTGGCGG 18: 36,693,970 (GRCm39) probably benign Het
Btnl10 CAAA CAAAAAA 11: 58,814,752 (GRCm39) probably benign Het
Cpne1 TCCAC TC 2: 155,915,430 (GRCm39) probably benign Het
Cyb5r4 ACACTGCCCAGGGATGTGACAGACACACTGCCCAGGGA ACACTGCCCAGGGATGTGACAGACGCACTGCCCAGGGATGTGACAGACACACTGCCCAGGGA 9: 86,922,464 (GRCm39) probably benign Het
Cyb5r4 AGACACACTGCCCAGGGA AGACACACTGCCCAGGGATGTGACCGACACACTGCCCAGGGA 9: 86,922,484 (GRCm39) probably benign Het
Dbr1 GAGGAG GAGGAGCAGGAG 9: 99,465,750 (GRCm39) probably benign Het
Defb22 GCGGCA GCGGCAGAGCTGGCCTTTGCGGCA 2: 152,327,753 (GRCm39) probably benign Het
Emid1 G T 11: 5,094,322 (GRCm39) P63Q probably damaging Het
Gabre GCTCCG GCTCCGACTCCG X: 71,313,654 (GRCm39) probably benign Het
Gar1 AACTGCC A 3: 129,624,337 (GRCm39) probably benign Het
Gm10181 GAGAGAGAGAGAGA G 9: 25,000,755 (GRCm39) probably null Het
Hic1 GGGA G 11: 75,060,281 (GRCm39) probably benign Het
Il2 GG GGGCTTGAAGTGTG 3: 37,179,991 (GRCm39) probably benign Het
Iqcf4 CTTTTCCTTTT CTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCGTTTTCCTTTT 9: 106,447,812 (GRCm39) probably benign Het
Irag2 TG TGAGCACATGG 6: 145,119,516 (GRCm39) probably benign Het
Krtap4-2 AGGGGCGGCAGC A 11: 99,525,547 (GRCm39) probably null Het
Lmx1b CATCTTGATGCCGTCCAA CA 2: 33,530,521 (GRCm39) probably null Het
Lrch1 TGGTGGTG T 14: 75,185,015 (GRCm39) probably null Het
Lypd8 CA CAGTTCCCTCGCCTCTGTTACCCCACAAATCACCAAGA 11: 58,281,069 (GRCm39) probably benign Het
Mamld1 AGC AGCTGC X: 70,162,441 (GRCm39) probably benign Het
Mrgprx1 GAAC GAACAAC 7: 47,671,257 (GRCm39) probably benign Het
Nefh CTTGGCCTCACCTGGGGACTTGGCCTCACCTGGGGA CTTGGCCTCACCTGGGGAATTGGCCTCACCTGGGGACTTGGCCTCACCTGGGGA 11: 4,891,016 (GRCm39) probably benign Het
Nusap1 AGTGAGGAGCAAGCTGAGA AGTGAGGAGCAAGCTGAGATACACGTTAGCCGTGAGGAGCAAGCTGAGA 2: 119,458,073 (GRCm39) probably benign Het
P4ha2 GGTGTTG GG 11: 54,001,076 (GRCm39) probably null Het
Padi3 TCTCAC TC 4: 140,520,283 (GRCm39) probably benign Het
Plekhs1 TCCAGAC TCCAGACCTCCCCCCAGAC 19: 56,468,290 (GRCm39) probably benign Het
Rassf6 AATGGGGATTC AATGGGGATTCTGCCTCACTCATGGTCCTGTAGAGCCATGGGGATTC 5: 90,756,791 (GRCm39) probably benign Het
Rassf6 ATTC ATTCTGCCTCACTCAGGGTCCTGTAGAGCAATGGGGCTTC 5: 90,756,798 (GRCm39) probably benign Het
Rgs22 CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA CAAAAAAAAAAAA 15: 36,010,982 (GRCm39) probably benign Het
Rnf144a TCTC TCTCTCTCTCTCTCGCTC 12: 26,364,013 (GRCm39) probably benign Het
Rpgrip1 GAG GAGAAG 14: 52,386,852 (GRCm39) probably benign Het
Sgpp1 ACACAC A 12: 75,769,399 (GRCm39) probably null Het
Slc39a4 GTC GTCATCATGATCACCATGGTCACCATGATCGCTGTGTTC 15: 76,499,070 (GRCm39) probably benign Het
Spaca1 TCTCGC TCTCGCGCTCGC 4: 34,049,846 (GRCm39) probably benign Het
Stard8 GGA GGATGA X: 98,110,126 (GRCm39) probably benign Het
Stard8 GA GAGCA X: 98,110,133 (GRCm39) probably benign Het
Tcof1 AGATCCCCTTGGC AGATCCCCTTGGCTGCTGAGAAGGGCACTTTCCCAGGGATCCCCTTGGC 18: 60,966,644 (GRCm39) probably benign Het
Tgoln1 TGGGCTTG TGGGCTTGTCAGAATCACCTCCTGCGGGCTTG 6: 72,593,019 (GRCm39) probably benign Het
Tgoln1 GCTTGCCAGAAT GCTTGCCAGAATCACCGCCCGTGGTCTTGCCAGAAT 6: 72,593,046 (GRCm39) probably benign Het
Tmed6 AGC AGCTCGC 8: 107,788,228 (GRCm39) probably null Het
Trappc9 GCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCT 15: 72,673,154 (GRCm39) probably benign Het
Zfp933 TT TTTGCCT 4: 147,910,188 (GRCm39) probably null Het
Other mutations in Ptms
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00703:Ptms APN 6 124,891,919 (GRCm39) unclassified probably benign
FR4304:Ptms UTSW 6 124,891,421 (GRCm39) unclassified probably benign
FR4342:Ptms UTSW 6 124,891,417 (GRCm39) unclassified probably benign
FR4449:Ptms UTSW 6 124,891,422 (GRCm39) unclassified probably benign
FR4548:Ptms UTSW 6 124,891,419 (GRCm39) unclassified probably benign
FR4737:Ptms UTSW 6 124,891,424 (GRCm39) unclassified probably benign
FR4737:Ptms UTSW 6 124,891,422 (GRCm39) unclassified probably benign
FR4737:Ptms UTSW 6 124,891,420 (GRCm39) unclassified probably benign
FR4976:Ptms UTSW 6 124,891,417 (GRCm39) unclassified probably benign
R6874:Ptms UTSW 6 124,891,194 (GRCm39) unclassified probably benign
RF020:Ptms UTSW 6 124,891,412 (GRCm39) unclassified probably benign
RF045:Ptms UTSW 6 124,891,413 (GRCm39) unclassified probably benign
Predicted Primers PCR Primer
(F):5'- TCTGCTTCATCCTGTGGAGAGG -3'
(R):5'- TGGCTTGACATCCATCACCC -3'

Sequencing Primer
(F):5'- TCCTGTGGAGAGGATAAGAGTTG -3'
(R):5'- CTTGTCTTGGTCCCCATAGG -3'
Posted On 2019-12-04