Mutagenetix > Incidental Mutation

Incidental Mutation 'R7835:Vmn1r57'

605912

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r57

Ensembl Gene

ENSMUSG00000091652

Gene Name

vomeronasal 1 receptor 57

Synonyms

Gm7519

MMRRC Submission

045889-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.056) question?

Stock #

R7835 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

5218493-5221736 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 5221139 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 221 (H221L)

Ref Sequence

ENSEMBL: ENSMUSP00000131917 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000170780] [ENSMUST00000227798] [ENSMUST00000228062]

AlphaFold

K7N731

Predicted Effect

probably benign
Transcript: ENSMUST00000170780
AA Change: H221L

PolyPhen 2 Score 0.440 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000131917
Gene: ENSMUSG00000091652
AA Change: H221L

Domain	Start	End	E-Value	Type
Pfam:TAS2R	1	290	1.7e-12	PFAM
Pfam:7tm_1	20	279	1.8e-6	PFAM
Pfam:V1R	32	289	1.1e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000227798
AA Change: H221L

PolyPhen 2 Score 0.440 (Sensitivity: 0.89; Specificity: 0.90)

Predicted Effect

probably benign
Transcript: ENSMUST00000228062
AA Change: H221L

PolyPhen 2 Score 0.440 (Sensitivity: 0.89; Specificity: 0.90)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

98% (48/49)

Allele List at MGI

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acan	T	A	7: 79,099,875 (GRCm38)	S1465T	probably benign	Het
Accsl	T	A	2: 93,865,984 (GRCm38)	K90*	probably null	Het
Adamts3	A	T	5: 89,700,440 (GRCm38)	D674E	possibly damaging	Het
Adap2	T	A	11: 80,160,231 (GRCm38)	V129D	probably benign	Het
Ank3	A	G	10: 69,987,727 (GRCm38)	D742G		Het
C1ra	G	A	6: 124,517,725 (GRCm38)	E316K	probably benign	Het
C330021F23Rik	A	G	8: 3,580,452 (GRCm38)		probably benign	Het
Cachd1	G	T	4: 100,974,153 (GRCm38)		probably null	Het
Ccne1	G	T	7: 38,102,845 (GRCm38)	Q133K	probably benign	Het
Cers3	C	T	7: 66,773,639 (GRCm38)	H111Y	possibly damaging	Het
Chst5	A	T	8: 111,890,602 (GRCm38)	L129M	probably damaging	Het
Depdc7	A	G	2: 104,728,185 (GRCm38)	S164P	probably benign	Het
Dnah10	G	A	5: 124,777,234 (GRCm38)	A1966T	probably damaging	Het
Fam208a	G	T	14: 27,476,643 (GRCm38)	G1311C	probably damaging	Het
Fcgbp	T	G	7: 28,117,207 (GRCm38)	S2365A	possibly damaging	Het
Ihh	A	G	1: 74,946,366 (GRCm38)	V320A	probably damaging	Het
Kdm5d	T	C	Y: 900,558 (GRCm38)	V201A	possibly damaging	Het
Kif13b	T	A	14: 64,767,452 (GRCm38)	H1117Q	probably benign	Het
Lcn8	C	A	2: 25,655,296 (GRCm38)		probably null	Het
Lrp4	T	C	2: 91,495,042 (GRCm38)	V1404A	possibly damaging	Het
Lrrc61	A	T	6: 48,568,572 (GRCm38)	T110S	probably benign	Het
Mrpl19	G	A	6: 81,962,126 (GRCm38)	R232C	probably damaging	Het
Muc5ac	G	C	7: 141,809,303 (GRCm38)	G2117A	unknown	Het
Mzt1	T	C	14: 99,046,003 (GRCm38)	T21A	probably benign	Het
Naip6	G	T	13: 100,316,004 (GRCm38)	A183E	probably benign	Het
Neb	T	C	2: 52,150,577 (GRCm38)	D6624G	probably benign	Het
Nup85	A	G	11: 115,570,071 (GRCm38)	D183G	probably benign	Het
Olfm5	A	T	7: 104,154,445 (GRCm38)	Y195*	probably null	Het
Olfr828	T	A	9: 18,815,809 (GRCm38)	M162L	probably benign	Het
Piezo2	A	T	18: 63,082,945 (GRCm38)	F1216I	probably benign	Het
Pkd1l3	GACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCA	GACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCA	8: 109,624,195 (GRCm38)		probably benign	Het
Polr1a	T	C	6: 71,915,142 (GRCm38)	V135A	probably benign	Het
Ppcdc	A	G	9: 57,420,276 (GRCm38)	S83P	probably benign	Het
Prss21	A	T	17: 23,869,451 (GRCm38)	Q130L	possibly damaging	Het
Rdx	T	A	9: 52,065,788 (GRCm38)	N112K	probably damaging	Het
Rgs22	A	G	15: 36,081,911 (GRCm38)		probably null	Het
Rps26	C	T	10: 128,626,126 (GRCm38)	V40I	probably benign	Het
Runx2	A	T	17: 44,608,236 (GRCm38)	M405K	probably damaging	Het
Serinc2	A	C	4: 130,275,487 (GRCm38)	C4G	unknown	Het
Sh3rf2	C	A	18: 42,111,170 (GRCm38)	R266S	probably benign	Het
Slc38a10	A	G	11: 120,116,996 (GRCm38)	I386T	possibly damaging	Het
Stab2	G	A	10: 86,872,619 (GRCm38)	P1694L	probably benign	Het
Taf4	G	A	2: 179,932,029 (GRCm38)	T682M	probably damaging	Het
Tmem102	A	G	11: 69,804,345 (GRCm38)	V267A	probably damaging	Het
Trim65	A	G	11: 116,130,929 (GRCm38)	L26P	probably damaging	Het
Vmn1r160	T	A	7: 22,871,954 (GRCm38)	M244K	possibly damaging	Het
Wdr89	C	A	12: 75,632,899 (GRCm38)	V194F	probably damaging	Het
Wee1	C	A	7: 110,130,878 (GRCm38)	Y396*	probably null	Het
Zfp451	A	T	1: 33,772,979 (GRCm38)	V885D	probably damaging	Het
Zfp981	A	T	4: 146,537,876 (GRCm38)	Q419H	probably benign	Het
Znfx1	A	G	2: 167,039,827 (GRCm38)	Y1081H	probably damaging	Het

Other mutations in Vmn1r57

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01770:Vmn1r57	APN	7	5,220,668 (GRCm38)	missense	possibly damaging	0.61
IGL03124:Vmn1r57	APN	7	5,221,022 (GRCm38)	missense	possibly damaging	0.91
R1779:Vmn1r57	UTSW	7	5,220,577 (GRCm38)	missense	possibly damaging	0.89
R3025:Vmn1r57	UTSW	7	5,220,715 (GRCm38)	nonsense	probably null
R3917:Vmn1r57	UTSW	7	5,220,631 (GRCm38)	missense	probably damaging	1.00
R4093:Vmn1r57	UTSW	7	5,220,857 (GRCm38)	missense	possibly damaging	0.80
R4552:Vmn1r57	UTSW	7	5,220,668 (GRCm38)	missense	possibly damaging	0.61
R4628:Vmn1r57	UTSW	7	5,220,973 (GRCm38)	missense	probably damaging	1.00
R5186:Vmn1r57	UTSW	7	5,221,108 (GRCm38)	missense	probably benign	0.08
R5290:Vmn1r57	UTSW	7	5,221,320 (GRCm38)	missense	probably damaging	1.00
R5559:Vmn1r57	UTSW	7	5,220,899 (GRCm38)	missense	probably damaging	1.00
R6372:Vmn1r57	UTSW	7	5,220,827 (GRCm38)	missense	possibly damaging	0.61
R7105:Vmn1r57	UTSW	7	5,220,500 (GRCm38)	missense	probably damaging	1.00
R7220:Vmn1r57	UTSW	7	5,220,560 (GRCm38)	missense	probably null	1.00
R7872:Vmn1r57	UTSW	7	5,220,614 (GRCm38)	missense	possibly damaging	0.48
R8310:Vmn1r57	UTSW	7	5,221,025 (GRCm38)	missense	probably damaging	1.00
R9679:Vmn1r57	UTSW	7	5,221,231 (GRCm38)	missense	probably benign	0.09
R9681:Vmn1r57	UTSW	7	5,221,070 (GRCm38)	missense	probably damaging	0.99
X0064:Vmn1r57	UTSW	7	5,220,761 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TGTCAGTGGTCCACAGAAATCAC -3'
(R):5'- GCAGAGAACAATGACCCCTAGG -3'

Sequencing Primer
(F):5'- GTGGTCCACAGAAATCACACAATG -3'
(R):5'- GGTTCCCTAAATATCAACAGTAAGGG -3'

Posted On

2019-12-20