Incidental Mutation 'R7856:Ccdc63'
| ID |
607232 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Ccdc63
|
| Ensembl Gene |
ENSMUSG00000043036 |
| Gene Name |
coiled-coil domain containing 63 |
| Synonyms |
4921511C16Rik |
| MMRRC Submission |
045909-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.120)
|
| Stock # |
R7856 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
5 |
| Chromosomal Location |
122246115-122276143 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 122268006 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tryptophan to Arginine
at position 8
(W8R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000050582
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000058960]
[ENSMUST00000128101]
[ENSMUST00000132701]
[ENSMUST00000152389]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000058960
AA Change: W8R
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000050582
Gene: ENSMUSG00000043036
AA Change: W8R
| Domain | Start | End | E-Value | Type |
|---|
|
coiled coil region
|
140 |
158 |
N/A |
INTRINSIC |
|
coiled coil region
|
209 |
285 |
N/A |
INTRINSIC |
|
low complexity region
|
308 |
318 |
N/A |
INTRINSIC |
|
coiled coil region
|
393 |
438 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000128101
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000132701
AA Change: W8R
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000152389
|
| Meta Mutation Damage Score |
0.0846 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 99.2%
|
| Validation Efficiency |
100% (36/36) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Cacna1h |
T |
C |
17: 25,608,451 (GRCm39) |
T819A |
probably damaging |
Het |
| Ccdc34 |
T |
A |
2: 109,874,572 (GRCm39) |
Y310* |
probably null |
Het |
| Ces2g |
G |
A |
8: 105,693,014 (GRCm39) |
V351I |
not run |
Het |
| Ces3b |
A |
G |
8: 105,819,894 (GRCm39) |
*572W |
probably null |
Het |
| Dgka |
T |
C |
10: 128,572,533 (GRCm39) |
N40S |
probably benign |
Het |
| Dnajc13 |
C |
A |
9: 104,044,684 (GRCm39) |
R1835L |
possibly damaging |
Het |
| Dusp7 |
C |
A |
9: 106,246,067 (GRCm39) |
A24E |
unknown |
Het |
| Ep400 |
T |
A |
5: 110,814,450 (GRCm39) |
T2931S |
probably damaging |
Het |
| Gm4847 |
A |
T |
1: 166,462,395 (GRCm39) |
L365Q |
probably damaging |
Het |
| Gtse1 |
C |
T |
15: 85,748,342 (GRCm39) |
T249M |
probably benign |
Het |
| Hook3 |
T |
C |
8: 26,525,249 (GRCm39) |
D619G |
probably damaging |
Het |
| Itsn1 |
T |
A |
16: 91,705,375 (GRCm39) |
|
probably null |
Het |
| Kti12 |
A |
C |
4: 108,705,443 (GRCm39) |
E119A |
probably benign |
Het |
| Kti12 |
G |
T |
4: 108,705,444 (GRCm39) |
E119D |
probably benign |
Het |
| Mx1 |
A |
G |
16: 97,256,735 (GRCm39) |
I148T |
probably damaging |
Het |
| Or5m3 |
T |
A |
2: 85,838,640 (GRCm39) |
N173K |
probably damaging |
Het |
| Or6c1b |
A |
G |
10: 129,272,885 (GRCm39) |
E68G |
probably damaging |
Het |
| Orc3 |
T |
C |
4: 34,585,647 (GRCm39) |
I416V |
probably benign |
Het |
| Plcxd3 |
A |
T |
15: 4,546,581 (GRCm39) |
Y195F |
probably damaging |
Het |
| Ppp1r3a |
A |
T |
6: 14,718,025 (GRCm39) |
I963N |
probably benign |
Het |
| Ppp1r7 |
A |
G |
1: 93,278,068 (GRCm39) |
D69G |
possibly damaging |
Het |
| Rars1 |
A |
G |
11: 35,699,412 (GRCm39) |
V627A |
probably benign |
Het |
| Sash1 |
A |
G |
10: 8,605,472 (GRCm39) |
S973P |
probably benign |
Het |
| Slc22a28 |
T |
C |
19: 8,040,698 (GRCm39) |
T518A |
probably damaging |
Het |
| Slc4a9 |
C |
T |
18: 36,661,751 (GRCm39) |
H92Y |
probably benign |
Het |
| Son |
A |
G |
16: 91,456,146 (GRCm39) |
D1631G |
probably damaging |
Het |
| Stat5a |
T |
C |
11: 100,774,728 (GRCm39) |
W746R |
unknown |
Het |
| Thsd4 |
A |
T |
9: 59,910,144 (GRCm39) |
L508Q |
probably damaging |
Het |
| Tlx1 |
C |
T |
19: 45,144,427 (GRCm39) |
Q292* |
probably null |
Het |
| Ttc34 |
T |
C |
4: 154,945,743 (GRCm39) |
V259A |
probably benign |
Het |
| Xrn2 |
T |
G |
2: 146,910,393 (GRCm39) |
|
probably null |
Het |
| Yif1b |
A |
G |
7: 28,944,045 (GRCm39) |
D137G |
possibly damaging |
Het |
| Zfp850 |
A |
G |
7: 27,689,899 (GRCm39) |
I103T |
probably benign |
Het |
| Zfp937 |
T |
C |
2: 150,081,467 (GRCm39) |
V499A |
probably benign |
Het |
|
| Other mutations in Ccdc63 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00919:Ccdc63
|
APN |
5 |
122,262,982 (GRCm39) |
splice site |
probably benign |
|
|
IGL01660:Ccdc63
|
APN |
5 |
122,249,027 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
IGL01773:Ccdc63
|
APN |
5 |
122,251,208 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
IGL02341:Ccdc63
|
APN |
5 |
122,251,261 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03030:Ccdc63
|
APN |
5 |
122,260,876 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02991:Ccdc63
|
UTSW |
5 |
122,246,275 (GRCm39) |
missense |
probably benign |
0.10 |
|
R0267:Ccdc63
|
UTSW |
5 |
122,255,107 (GRCm39) |
splice site |
probably benign |
|
|
R0961:Ccdc63
|
UTSW |
5 |
122,249,009 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R1333:Ccdc63
|
UTSW |
5 |
122,246,224 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1802:Ccdc63
|
UTSW |
5 |
122,267,940 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1999:Ccdc63
|
UTSW |
5 |
122,265,628 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R2048:Ccdc63
|
UTSW |
5 |
122,268,350 (GRCm39) |
critical splice donor site |
probably null |
|
|
R2150:Ccdc63
|
UTSW |
5 |
122,265,628 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R2350:Ccdc63
|
UTSW |
5 |
122,260,948 (GRCm39) |
missense |
probably benign |
0.04 |
|
R4049:Ccdc63
|
UTSW |
5 |
122,260,813 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5072:Ccdc63
|
UTSW |
5 |
122,259,118 (GRCm39) |
missense |
probably benign |
0.28 |
|
R5847:Ccdc63
|
UTSW |
5 |
122,254,908 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R6031:Ccdc63
|
UTSW |
5 |
122,267,799 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R6031:Ccdc63
|
UTSW |
5 |
122,267,799 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R6249:Ccdc63
|
UTSW |
5 |
122,263,062 (GRCm39) |
missense |
probably benign |
0.17 |
|
R6782:Ccdc63
|
UTSW |
5 |
122,249,077 (GRCm39) |
nonsense |
probably null |
|
|
R7073:Ccdc63
|
UTSW |
5 |
122,249,073 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7250:Ccdc63
|
UTSW |
5 |
122,260,906 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7448:Ccdc63
|
UTSW |
5 |
122,246,245 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7584:Ccdc63
|
UTSW |
5 |
122,251,267 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R7773:Ccdc63
|
UTSW |
5 |
122,247,335 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8114:Ccdc63
|
UTSW |
5 |
122,251,244 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R8933:Ccdc63
|
UTSW |
5 |
122,251,265 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9036:Ccdc63
|
UTSW |
5 |
122,247,346 (GRCm39) |
missense |
probably benign |
0.08 |
|
R9136:Ccdc63
|
UTSW |
5 |
122,259,146 (GRCm39) |
missense |
probably damaging |
1.00 |
|
X0028:Ccdc63
|
UTSW |
5 |
122,247,238 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGACACCCCTCTTACTATTGGC -3'
(R):5'- CGAGTTTGACTTGTCACCTGGC -3'
Sequencing Primer
(F):5'- TACTATTGGCCGGCGATCATACG -3'
(R):5'- ACTTGTCACCTGGCAGCCC -3'
|
| Posted On |
2019-12-20 |
Incidental Mutation