Mutagenetix > Incidental Mutation

Incidental Mutation 'R7866:Slc10a5'

607761

Institutional Source

Beutler Lab

Gene Symbol

Slc10a5

Ensembl Gene

ENSMUSG00000058921

Gene Name

solute carrier family 10 (sodium/bile acid cotransporter family), member 5

Synonyms

LOC241877

MMRRC Submission

045918-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.105) question?

Stock #

R7866 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

10396794-10400716 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 10399532 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Tyrosine at position 376 (F376Y)

Ref Sequence

ENSEMBL: ENSMUSP00000077808 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000065938] [ENSMUST00000078748] [ENSMUST00000118410] [ENSMUST00000128912] [ENSMUST00000191670] [ENSMUST00000192603]

AlphaFold

Q5PT54

Predicted Effect

probably benign
Transcript: ENSMUST00000065938

SMART Domains

Protein: ENSMUSP00000068174
Gene: ENSMUSG00000027531

Domain	Start	End	E-Value	Type
Pfam:Inositol_P	5	271	1.5e-86	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000078748
AA Change: F376Y

PolyPhen 2 Score 0.985 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000077808
Gene: ENSMUSG00000058921
AA Change: F376Y

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:SBF	144	328	1.1e-34	PFAM
transmembrane domain	336	358	N/A	INTRINSIC
transmembrane domain	365	384	N/A	INTRINSIC
transmembrane domain	394	416	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000118410

SMART Domains

Protein: ENSMUSP00000113860
Gene: ENSMUSG00000027531

Domain	Start	End	E-Value	Type
Pfam:Inositol_P	5	271	7.7e-79	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000128912

SMART Domains

Protein: ENSMUSP00000116088
Gene: ENSMUSG00000027531

Domain	Start	End	E-Value	Type
Pfam:Inositol_P	19	90	4.4e-16	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000191670

SMART Domains

Protein: ENSMUSP00000141345
Gene: ENSMUSG00000027531

Domain	Start	End	E-Value	Type
Pfam:Inositol_P	5	180	4.7e-49	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000192603

SMART Domains

Protein: ENSMUSP00000141735
Gene: ENSMUSG00000103392

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
low complexity region	69	85	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcg1	C	T	17: 31,317,269 (GRCm39)	R194*	probably null	Het
Actl6a	A	G	3: 32,766,262 (GRCm39)	T39A	possibly damaging	Het
Adamts6	T	A	13: 104,550,257 (GRCm39)	C624*	probably null	Het
Adgrl1	T	C	8: 84,664,564 (GRCm39)		probably null	Het
Ap3m2	A	G	8: 23,289,674 (GRCm39)	V143A	probably benign	Het
Ap5m1	T	C	14: 49,311,218 (GRCm39)	V96A	probably damaging	Het
Aqp5	T	A	15: 99,489,424 (GRCm39)	V91E	probably damaging	Het
Atp6v0b	A	T	4: 117,742,350 (GRCm39)	I181N	probably damaging	Het
Ccp110	T	A	7: 118,322,241 (GRCm39)	M632K	probably benign	Het
Cd44	A	T	2: 102,672,604 (GRCm39)		probably null	Het
Cidea	G	A	18: 67,491,854 (GRCm39)	R38Q	probably damaging	Het
Cnn3	T	C	3: 121,245,042 (GRCm39)	I86T	probably benign	Het
Col14a1	C	A	15: 55,252,016 (GRCm39)	D557E	unknown	Het
Col6a6	T	C	9: 105,566,760 (GRCm39)	Y2245C	probably damaging	Het
Dhrs4	A	T	14: 55,725,092 (GRCm39)	N196Y	probably damaging	Het
Dnah8	T	C	17: 31,093,901 (GRCm39)	V4665A	possibly damaging	Het
Dpep2	T	C	8: 106,716,113 (GRCm39)	T267A		Het
Dtx3l	T	A	16: 35,759,120 (GRCm39)	Q43L	probably benign	Het
Ednrb	A	G	14: 104,080,738 (GRCm39)	S59P	probably benign	Het
Eml4	A	G	17: 83,758,126 (GRCm39)	T435A	probably benign	Het
Fam135b	A	T	15: 71,333,925 (GRCm39)	F1090I	probably benign	Het
Filip1	A	G	9: 79,726,225 (GRCm39)	V798A	probably benign	Het
Fnip1	T	G	11: 54,356,228 (GRCm39)		probably benign	Het
Gabrb2	C	T	11: 42,378,050 (GRCm39)	Q89*	probably null	Het
Gtf2ird1	A	T	5: 134,392,063 (GRCm39)	V882E	probably benign	Het
Gucy1a2	T	A	9: 3,532,804 (GRCm39)	M1K	probably null	Het
Ift70b	A	G	2: 75,766,963 (GRCm39)	S597P	possibly damaging	Het
Igkv10-96	T	A	6: 68,609,025 (GRCm39)	D90V	possibly damaging	Het
Igkv4-54	G	A	6: 69,608,740 (GRCm39)	R60C	probably benign	Het
Igkv7-33	G	T	6: 70,035,847 (GRCm39)	A45D	probably damaging	Het
Klk1b22	A	T	7: 43,762,168 (GRCm39)	I15F	possibly damaging	Het
Lamp3	T	A	16: 19,518,490 (GRCm39)	D249V	probably benign	Het
Lrrfip2	T	C	9: 111,022,149 (GRCm39)	V125A	possibly damaging	Het
Mprip	G	A	11: 59,643,756 (GRCm39)	R638H	possibly damaging	Het
Muc5ac	A	G	7: 141,349,589 (GRCm39)	M501V	probably benign	Het
Myo5a	C	T	9: 75,111,034 (GRCm39)	P1509S	probably damaging	Het
Ngdn	A	G	14: 55,258,554 (GRCm39)	Y63C	probably damaging	Het
Oit3	A	G	10: 59,259,852 (GRCm39)	V517A	probably benign	Het
Or8g21	A	T	9: 38,906,027 (GRCm39)	S235T	not run	Het
Pcdhb18	T	A	18: 37,623,512 (GRCm39)	F281I	probably damaging	Het
Pkd1	C	A	17: 24,809,881 (GRCm39)	Q3520K	probably benign	Het
Plxnb1	T	A	9: 108,929,525 (GRCm39)	I127N	probably damaging	Het
Ppfia2	A	T	10: 106,655,390 (GRCm39)	N319I	probably damaging	Het
Pxn	T	C	5: 115,686,665 (GRCm39)	S386P	possibly damaging	Het
Ralgps2	C	T	1: 156,714,738 (GRCm39)	V104I	probably benign	Het
Rp1	C	T	1: 4,417,924 (GRCm39)	V1063I	probably benign	Het
Snd1	T	A	6: 28,527,724 (GRCm39)	I277N	probably damaging	Het
Spc25	A	G	2: 69,036,406 (GRCm39)		probably null	Het
Tex29	A	G	8: 11,894,055 (GRCm39)	N6D	unknown	Het
Top6bl	T	A	19: 4,748,514 (GRCm39)	R61S	unknown	Het
Ttc6	G	A	12: 57,721,435 (GRCm39)	A975T	probably damaging	Het
Uba6	T	C	5: 86,320,560 (GRCm39)	E13G	probably damaging	Het
Ugcg	T	G	4: 59,211,927 (GRCm39)	C98G	possibly damaging	Het
Ugt2b36	T	A	5: 87,240,190 (GRCm39)	D65V	probably damaging	Het
Unc93b1	A	T	19: 3,985,243 (GRCm39)	D17V	not run	Het
Usf1	G	T	1: 171,245,462 (GRCm39)	W291C	unknown	Het
Vps29	T	C	5: 122,500,180 (GRCm39)	W97R	possibly damaging	Het
Zbtb6	T	C	2: 37,319,577 (GRCm39)	E117G	probably damaging	Het
Zfp735	A	C	11: 73,601,629 (GRCm39)	D191A	probably benign	Het

Other mutations in Slc10a5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01102:Slc10a5	APN	3	10,400,369 (GRCm39)	missense	probably benign	0.05
IGL01785:Slc10a5	APN	3	10,400,259 (GRCm39)	missense	probably benign	0.00
IGL01823:Slc10a5	APN	3	10,399,574 (GRCm39)	missense	possibly damaging	0.93
IGL01915:Slc10a5	APN	3	10,400,580 (GRCm39)	missense	probably damaging	0.98
IGL02522:Slc10a5	APN	3	10,400,181 (GRCm39)	missense	probably benign	0.09
IGL02721:Slc10a5	APN	3	10,399,595 (GRCm39)	missense	probably benign	0.01
PIT4382001:Slc10a5	UTSW	3	10,400,507 (GRCm39)	missense	probably benign
R0558:Slc10a5	UTSW	3	10,400,177 (GRCm39)	missense	probably damaging	1.00
R0961:Slc10a5	UTSW	3	10,399,484 (GRCm39)	missense	probably benign	0.00
R1747:Slc10a5	UTSW	3	10,400,451 (GRCm39)	missense	probably benign	0.04
R1889:Slc10a5	UTSW	3	10,400,550 (GRCm39)	missense	probably benign	0.33
R2130:Slc10a5	UTSW	3	10,400,278 (GRCm39)	missense	probably benign
R2171:Slc10a5	UTSW	3	10,400,342 (GRCm39)	missense	possibly damaging	0.59
R2970:Slc10a5	UTSW	3	10,400,127 (GRCm39)	missense	probably damaging	1.00
R2972:Slc10a5	UTSW	3	10,399,517 (GRCm39)	missense	probably damaging	0.98
R2973:Slc10a5	UTSW	3	10,399,517 (GRCm39)	missense	probably damaging	0.98
R4241:Slc10a5	UTSW	3	10,400,520 (GRCm39)	missense	probably damaging	1.00
R4700:Slc10a5	UTSW	3	10,400,360 (GRCm39)	missense	probably damaging	1.00
R4700:Slc10a5	UTSW	3	10,400,359 (GRCm39)	missense	probably damaging	1.00
R4790:Slc10a5	UTSW	3	10,400,096 (GRCm39)	missense	probably damaging	1.00
R4834:Slc10a5	UTSW	3	10,399,859 (GRCm39)	missense	probably damaging	0.97
R4891:Slc10a5	UTSW	3	10,399,685 (GRCm39)	missense	possibly damaging	0.79
R5220:Slc10a5	UTSW	3	10,400,148 (GRCm39)	nonsense	probably null
R5548:Slc10a5	UTSW	3	10,399,377 (GRCm39)	missense	probably benign
R5748:Slc10a5	UTSW	3	10,400,391 (GRCm39)	missense	probably benign	0.00
R6573:Slc10a5	UTSW	3	10,400,110 (GRCm39)	missense	probably damaging	1.00
R6909:Slc10a5	UTSW	3	10,400,655 (GRCm39)	missense	possibly damaging	0.90
R7355:Slc10a5	UTSW	3	10,399,375 (GRCm39)	nonsense	probably null
R7807:Slc10a5	UTSW	3	10,400,529 (GRCm39)	missense	probably benign	0.00
R8219:Slc10a5	UTSW	3	10,400,384 (GRCm39)	missense	probably benign	0.32
R8975:Slc10a5	UTSW	3	10,399,670 (GRCm39)	missense	probably benign	0.17
R9044:Slc10a5	UTSW	3	10,399,792 (GRCm39)	missense	probably damaging	1.00
R9514:Slc10a5	UTSW	3	10,400,532 (GRCm39)	missense	possibly damaging	0.83
Z1176:Slc10a5	UTSW	3	10,399,547 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGCTTGAAGGTGACTATAGTGCATC -3'
(R):5'- GGGCATCTACTTGGCTTTCC -3'

Sequencing Primer
(F):5'- TGACTATAGTGCATCTGCTGTAC -3'
(R):5'- CATCTACTTGGCTTTCCGGATGG -3'

Posted On

2019-12-20