Mutagenetix > Incidental Mutation

Incidental Mutation 'R7875:Or2ad1'

608400

Institutional Source

Beutler Lab

Gene Symbol

Or2ad1

Ensembl Gene

ENSMUSG00000045474

Gene Name

olfactory receptor family 2 subfamily AD member 1

Synonyms

MOR256-15, Olfr1368, GA_x6K02T2QHY8-12104556-12105500

MMRRC Submission

045927-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.090) question?

Stock #

R7875 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

21326281-21327225 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 21327093 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Phenylalanine at position 45 (I45F)

Ref Sequence

ENSEMBL: ENSMUSP00000149549 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000055298] [ENSMUST00000216039]

AlphaFold

Q8VFG3

Predicted Effect

probably damaging
Transcript: ENSMUST00000055298
AA Change: I45F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000050942
Gene: ENSMUSG00000045474
AA Change: I45F

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	4.8e-49	PFAM
Pfam:7tm_1	41	290	1.6e-20	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000216039
AA Change: I45F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.2%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acap2	A	T	16: 30,958,459 (GRCm39)	F102I	probably damaging	Het
Acp7	A	T	7: 28,314,152 (GRCm39)	Y348N	probably damaging	Het
Adgre4	A	T	17: 56,099,016 (GRCm39)	D174V	probably benign	Het
Ahdc1	A	G	4: 132,791,161 (GRCm39)	T801A	possibly damaging	Het
Aldh1a7	A	C	19: 20,693,343 (GRCm39)	V192G	possibly damaging	Het
Anp32b	T	G	4: 46,451,301 (GRCm39)	D2E	probably benign	Het
Arhgef11	A	T	3: 87,591,808 (GRCm39)	D53V	probably damaging	Het
Arid5b	T	C	10: 67,964,771 (GRCm39)	N300S	probably benign	Het
Ascc2	A	G	11: 4,618,389 (GRCm39)	N328S	probably benign	Het
Aspm	A	T	1: 139,382,872 (GRCm39)	Q68L	probably benign	Het
Ccng2	C	G	5: 93,421,202 (GRCm39)	S237R	probably benign	Het
Ccser1	A	T	6: 61,288,932 (GRCm39)	H365L	probably benign	Het
Col1a2	T	A	6: 4,518,500 (GRCm39)	N213K	unknown	Het
Col7a1	T	C	9: 108,787,763 (GRCm39)	V681A	unknown	Het
Cplane1	A	G	15: 8,239,446 (GRCm39)	I1216V	probably benign	Het
Dock9	A	T	14: 121,863,396 (GRCm39)	Y792*	probably null	Het
Fam241b	A	T	10: 61,970,271 (GRCm39)	S10R		Het
Gab1	C	T	8: 81,515,395 (GRCm39)	D308N	probably damaging	Het
Gdf11	C	T	10: 128,722,210 (GRCm39)	R215H	probably benign	Het
Gpc1	T	C	1: 92,782,970 (GRCm39)		probably null	Het
Hnf4a	G	T	2: 163,400,980 (GRCm39)	E200*	probably null	Het
Ints2	T	C	11: 86,103,888 (GRCm39)	T1086A	probably damaging	Het
Kbtbd7	A	G	14: 79,664,806 (GRCm39)	T213A	probably benign	Het
Kcnt2	A	G	1: 140,501,385 (GRCm39)	D917G	probably damaging	Het
Kdm5a	C	A	6: 120,375,979 (GRCm39)	Y578*	probably null	Het
Lrrtm4	A	T	6: 79,999,343 (GRCm39)	T252S	possibly damaging	Het
Mamdc4	C	T	2: 25,458,677 (GRCm39)	W305*	probably null	Het
Mzb1	A	G	18: 35,780,913 (GRCm39)	I125T	possibly damaging	Het
Nfrkb	A	G	9: 31,321,450 (GRCm39)	T716A	possibly damaging	Het
Or4f6	A	G	2: 111,839,192 (GRCm39)	V113A	probably benign	Het
Or52r1b	A	G	7: 102,691,060 (GRCm39)	M120V	probably damaging	Het
Or8k16	G	A	2: 85,519,838 (GRCm39)	E22K	probably benign	Het
Plcxd2	G	A	16: 45,830,065 (GRCm39)	A52V	possibly damaging	Het
Poteg	C	T	8: 27,939,942 (GRCm39)	P95L	probably benign	Het
Prdm9	A	T	17: 15,773,804 (GRCm39)	Y322*	probably null	Het
Rab11fip2	G	C	19: 59,925,655 (GRCm39)	I187M	possibly damaging	Het
Ranbp2	G	T	10: 58,314,277 (GRCm39)	E1666*	probably null	Het
Rin3	T	C	12: 102,335,735 (GRCm39)	S549P	probably damaging	Het
Scn10a	C	T	9: 119,464,508 (GRCm39)		probably null	Het
Scn3a	A	G	2: 65,327,826 (GRCm39)	F888S	probably damaging	Het
Sik3	T	A	9: 46,034,528 (GRCm39)	I96N	probably damaging	Het
Slc12a7	T	A	13: 73,936,723 (GRCm39)	C128S	possibly damaging	Het
Spata31h1	T	C	10: 82,123,456 (GRCm39)	S3185G	possibly damaging	Het
Syde2	A	G	3: 145,726,020 (GRCm39)	E1304G	probably damaging	Het
Tagln	T	C	9: 45,841,680 (GRCm39)	I199V	probably damaging	Het
Tars3	T	A	7: 65,327,899 (GRCm39)	V536E	probably benign	Het
Tas2r140	A	G	6: 40,469,097 (GRCm39)	K309R	probably damaging	Het
Thra	A	T	11: 98,659,257 (GRCm39)	D462V	probably damaging	Het
Topaz1	A	G	9: 122,578,652 (GRCm39)	T521A	possibly damaging	Het
Uhrf1	A	G	17: 56,619,884 (GRCm39)	N265S	possibly damaging	Het
Upk3b	A	T	5: 136,069,057 (GRCm39)	Y142F	probably benign	Het
Vmn1r219	T	C	13: 23,347,363 (GRCm39)	V184A	possibly damaging	Het
Vmn1r58	T	C	7: 5,413,753 (GRCm39)	D159G	probably damaging	Het
Vnn3	C	A	10: 23,743,146 (GRCm39)	A452D	possibly damaging	Het
Wscd1	T	A	11: 71,679,560 (GRCm39)	Y478N	probably damaging	Het
Xrcc5	C	T	1: 72,369,090 (GRCm39)	R315C	probably damaging	Het
Zkscan5	A	C	5: 145,157,676 (GRCm39)	H726P	probably damaging	Het

Other mutations in Or2ad1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL03354:Or2ad1	APN	13	21,326,654 (GRCm39)	missense	probably damaging	1.00
IGL03385:Or2ad1	APN	13	21,326,657 (GRCm39)	missense	probably benign	0.01
R0137:Or2ad1	UTSW	13	21,326,336 (GRCm39)	missense	possibly damaging	0.86
R1168:Or2ad1	UTSW	13	21,326,787 (GRCm39)	missense	probably benign	0.04
R1212:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1214:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1237:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1238:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1239:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1280:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1309:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1436:Or2ad1	UTSW	13	21,327,162 (GRCm39)	missense	probably benign	0.01
R1443:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1444:Or2ad1	UTSW	13	21,326,337 (GRCm39)	missense	probably benign	0.16
R1602:Or2ad1	UTSW	13	21,326,820 (GRCm39)	missense	probably damaging	0.99
R1627:Or2ad1	UTSW	13	21,327,125 (GRCm39)	missense	probably damaging	0.99
R1649:Or2ad1	UTSW	13	21,326,912 (GRCm39)	missense	probably damaging	1.00
R1781:Or2ad1	UTSW	13	21,326,934 (GRCm39)	missense	probably benign	0.08
R1858:Or2ad1	UTSW	13	21,326,564 (GRCm39)	missense	probably damaging	1.00
R2520:Or2ad1	UTSW	13	21,326,746 (GRCm39)	nonsense	probably null
R4873:Or2ad1	UTSW	13	21,326,450 (GRCm39)	missense	probably damaging	1.00
R4875:Or2ad1	UTSW	13	21,326,450 (GRCm39)	missense	probably damaging	1.00
R5009:Or2ad1	UTSW	13	21,326,435 (GRCm39)	missense	probably benign	0.01
R6222:Or2ad1	UTSW	13	21,327,047 (GRCm39)	missense	probably damaging	1.00
R7031:Or2ad1	UTSW	13	21,327,170 (GRCm39)	missense	probably benign
R7126:Or2ad1	UTSW	13	21,326,888 (GRCm39)	missense	probably damaging	1.00
R7691:Or2ad1	UTSW	13	21,327,140 (GRCm39)	missense	probably benign
R7966:Or2ad1	UTSW	13	21,326,356 (GRCm39)	nonsense	probably null
R8015:Or2ad1	UTSW	13	21,326,303 (GRCm39)	missense	probably benign
R8155:Or2ad1	UTSW	13	21,327,062 (GRCm39)	missense	probably damaging	1.00
R8247:Or2ad1	UTSW	13	21,326,295 (GRCm39)	missense	probably benign
R8787:Or2ad1	UTSW	13	21,326,453 (GRCm39)	missense	possibly damaging	0.93

Predicted Primers

PCR Primer
(F):5'- CCAAGAGGAGACATTCTGTGG -3'
(R):5'- TACAGAGACTTTCCATTCCATACC -3'

Sequencing Primer
(F):5'- AGACATTCTGTGGCTCCCAG -3'
(R):5'- AGCTCTGAGACAGACTTC -3'

Posted On

2019-12-20