Mutagenetix > Incidental Mutation

Incidental Mutation 'R7878:Stk16'

608551

Institutional Source

Beutler Lab

Gene Symbol

Stk16

Ensembl Gene

ENSMUSG00000026201

Gene Name

serine/threonine kinase 16

Synonyms

EDPK, Embryo-Derived Protein Kinase, PKL12, Krct

MMRRC Submission

045930-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R7878 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

75187482-75192250 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 75189589 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Stop codon at position 167 (L167*)

Ref Sequence

ENSEMBL: ENSMUSP00000027401 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000027401] [ENSMUST00000113623] [ENSMUST00000123825] [ENSMUST00000144355] [ENSMUST00000155716] [ENSMUST00000185448] [ENSMUST00000186213] [ENSMUST00000186758] [ENSMUST00000188460] [ENSMUST00000188593] [ENSMUST00000189131] [ENSMUST00000189698] [ENSMUST00000190717] [ENSMUST00000191108]

AlphaFold

O88697

Predicted Effect

probably null
Transcript: ENSMUST00000027401
AA Change: L167*

SMART Domains

Protein: ENSMUSP00000027401
Gene: ENSMUSG00000026201
AA Change: L167*

Domain	Start	End	E-Value	Type
Pfam:Pkinase	20	290	3.3e-47	PFAM
Pfam:Pkinase_Tyr	21	290	3e-28	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000079464

SMART Domains

Protein: ENSMUSP00000078429
Gene: ENSMUSG00000026202

Domain	Start	End	E-Value	Type
Tubulin	49	246	4.34e-79	SMART
Tubulin_C	248	393	7.88e-59	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000113623

SMART Domains

Protein: ENSMUSP00000109253
Gene: ENSMUSG00000026200

Domain	Start	End	E-Value	Type
low complexity region	5	19	N/A	INTRINSIC
Pfam:Glyco_hydro_35	34	351	4.1e-123	PFAM
Pfam:Glyco_hydro_42	48	209	6.6e-12	PFAM
low complexity region	355	371	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000123825

SMART Domains

Protein: ENSMUSP00000122688
Gene: ENSMUSG00000026201

Domain	Start	End	E-Value	Type
Pfam:Pkinase	20	122	9.1e-11	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000144355

SMART Domains

Protein: ENSMUSP00000115964
Gene: ENSMUSG00000026201

Domain	Start	End	E-Value	Type
Pfam:Pkinase	20	122	9.1e-11	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000155716

SMART Domains

Protein: ENSMUSP00000136285
Gene: ENSMUSG00000026200

Domain	Start	End	E-Value	Type
low complexity region	5	19	N/A	INTRINSIC
Pfam:Glyco_hydro_35	34	351	4.2e-125	PFAM
Pfam:Glyco_hydro_42	48	209	6.6e-12	PFAM
low complexity region	355	371	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000185448

SMART Domains

Protein: ENSMUSP00000140820
Gene: ENSMUSG00000026200

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Pfam:Glyco_hydro_35	34	188	1.6e-71	PFAM
Pfam:Glyco_hydro_42	48	188	6.4e-10	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000186173

Predicted Effect

probably benign
Transcript: ENSMUST00000186213

SMART Domains

Protein: ENSMUSP00000140657
Gene: ENSMUSG00000026202

Domain	Start	End	E-Value	Type
Tubulin	49	246	4.34e-79	SMART
Tubulin_C	248	393	7.88e-59	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000186758

SMART Domains

Protein: ENSMUSP00000140552
Gene: ENSMUSG00000026202

Domain	Start	End	E-Value	Type
Pfam:Tubulin	1	100	1.1e-22	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000186971

Predicted Effect

probably null
Transcript: ENSMUST00000188460
AA Change: L49*

SMART Domains

Protein: ENSMUSP00000139998
Gene: ENSMUSG00000026201
AA Change: L49*

Domain	Start	End	E-Value	Type
S_TKc	20	172	1e-2	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000188593

SMART Domains

Protein: ENSMUSP00000140881
Gene: ENSMUSG00000026202

Domain	Start	End	E-Value	Type
Pfam:Tubulin	2	75	2e-16	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000189131

SMART Domains

Protein: ENSMUSP00000140970
Gene: ENSMUSG00000026202

Domain	Start	End	E-Value	Type
Pfam:Tubulin	1	81	3.6e-15	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000189698
AA Change: L167*

SMART Domains

Protein: ENSMUSP00000140329
Gene: ENSMUSG00000026201
AA Change: L167*

Domain	Start	End	E-Value	Type
S_TKc	20	203	1.1e-5	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000190717

SMART Domains

Protein: ENSMUSP00000141097
Gene: ENSMUSG00000026202

Domain	Start	End	E-Value	Type
Pfam:Tubulin	1	89	1.4e-18	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000191108
AA Change: L167*

SMART Domains

Protein: ENSMUSP00000139846
Gene: ENSMUSG00000026201
AA Change: L167*

Domain	Start	End	E-Value	Type
Pfam:Pkinase	20	186	8.6e-29	PFAM
Pfam:Pkinase_Tyr	21	184	2.1e-14	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ahi1	G	A	10: 20,857,330 (GRCm39)		probably null	Het
Ak7	T	A	12: 105,733,008 (GRCm39)	I584N	probably damaging	Het
Akip1	A	T	7: 109,306,609 (GRCm39)	Y102F	probably damaging	Het
Alg9	T	C	9: 50,754,083 (GRCm39)	Y588H	probably benign	Het
Arid1a	A	T	4: 133,414,582 (GRCm39)	N831K	unknown	Het
Bcl2l11	T	A	2: 127,970,608 (GRCm39)	L19*	probably null	Het
Btn1a1	T	C	13: 23,643,214 (GRCm39)	T412A	possibly damaging	Het
Ccbe1	T	C	18: 66,209,462 (GRCm39)	N193D	possibly damaging	Het
Ccdc168	T	C	1: 44,095,174 (GRCm39)	S1975G	probably benign	Het
Cd96	A	G	16: 45,938,139 (GRCm39)	S109P	probably damaging	Het
Cdh23	A	C	10: 60,149,979 (GRCm39)	I2622S	possibly damaging	Het
Cmya5	G	T	13: 93,226,265 (GRCm39)	T2941K	probably damaging	Het
Cntn1	T	C	15: 92,192,934 (GRCm39)	Y679H	probably damaging	Het
Cpsf1	A	G	15: 76,484,700 (GRCm39)	V619A	probably damaging	Het
Elp5	T	A	11: 69,861,425 (GRCm39)	I185F	probably damaging	Het
Frem1	A	G	4: 82,938,917 (GRCm39)	V55A	probably benign	Het
Kif1b	A	T	4: 149,299,454 (GRCm39)	Y985N	probably damaging	Het
Lao1	A	G	4: 118,824,619 (GRCm39)	N234D	probably benign	Het
Lima1	C	T	15: 99,717,431 (GRCm39)	V192I	probably benign	Het
Lrp2	T	G	2: 69,338,153 (GRCm39)	D1209A	probably damaging	Het
Lrp2	C	A	2: 69,338,154 (GRCm39)	D1209Y	probably damaging	Het
Luzp1	A	G	4: 136,269,163 (GRCm39)	H462R	probably benign	Het
Mab21l1	A	T	3: 55,691,438 (GRCm39)	T342S	probably benign	Het
Mst1	T	C	9: 107,961,812 (GRCm39)	V657A	probably benign	Het
Mtmr11	A	G	3: 96,076,515 (GRCm39)	K490R	probably benign	Het
Myh3	A	G	11: 66,978,077 (GRCm39)	D383G	probably damaging	Het
Nectin1	G	A	9: 43,715,198 (GRCm39)	G478D	probably benign	Het
Nrip1	A	G	16: 76,091,554 (GRCm39)	M1T	probably null	Het
Odad1	A	G	7: 45,573,984 (GRCm39)	E17G	possibly damaging	Het
Odad2	G	T	18: 7,217,801 (GRCm39)	H638N	probably benign	Het
Or1j10	A	G	2: 36,267,145 (GRCm39)	D119G	probably damaging	Het
Or52z15	A	T	7: 103,332,471 (GRCm39)	H182L	probably damaging	Het
Pnisr	C	A	4: 21,874,370 (GRCm39)	F704L	unknown	Het
Ptpn21	T	A	12: 98,681,387 (GRCm39)	K82N	probably damaging	Het
Pyroxd2	T	G	19: 42,731,104 (GRCm39)		probably null	Het
Pzp	A	G	6: 128,489,274 (GRCm39)	S446P	possibly damaging	Het
Rbck1	T	A	2: 152,160,330 (GRCm39)	I450F	probably damaging	Het
Rnase4	T	A	14: 51,342,333 (GRCm39)	L19Q	probably damaging	Het
Rrp9	A	G	9: 106,358,516 (GRCm39)	E118G	probably damaging	Het
Sec22a	A	G	16: 35,168,005 (GRCm39)	S169P	probably benign	Het
Sema5b	G	A	16: 35,481,996 (GRCm39)	S957N	probably benign	Het
Serpina3g	A	T	12: 104,204,361 (GRCm39)		probably benign	Het
Skint2	A	T	4: 112,506,942 (GRCm39)	I322F	possibly damaging	Het
Spata31h1	G	A	10: 82,119,856 (GRCm39)	R4385W	probably benign	Het
Sspo	G	A	6: 48,469,460 (GRCm39)	C4471Y	probably damaging	Het
Tanc2	G	A	11: 105,804,241 (GRCm39)	R245H		Het
Tdpoz1	G	A	3: 93,578,431 (GRCm39)	Q118*	probably null	Het
Tekt3	C	T	11: 62,961,277 (GRCm39)	R149*	probably null	Het
Tenm4	A	G	7: 96,501,564 (GRCm39)	E1256G	probably damaging	Het
Tie1	G	A	4: 118,335,621 (GRCm39)	R791C	probably damaging	Het
Tpr	T	A	1: 150,299,411 (GRCm39)	S1204T	possibly damaging	Het
Trim28	G	T	7: 12,758,289 (GRCm39)		probably benign	Het
Ucp1	A	G	8: 84,024,521 (GRCm39)	N282S	probably benign	Het
Unc80	T	A	1: 66,640,300 (GRCm39)	D1402E	possibly damaging	Het
Vmn1r69	T	A	7: 10,314,717 (GRCm39)	T5S	probably benign	Het
Zfyve28	T	A	5: 34,356,999 (GRCm39)	K733M	probably damaging	Het

Other mutations in Stk16

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01992:Stk16	APN	1	75,189,835 (GRCm39)	missense	probably benign
IGL02993:Stk16	APN	1	75,189,648 (GRCm39)	missense	probably damaging	1.00
IGL03215:Stk16	APN	1	75,189,236 (GRCm39)	splice site	probably benign
R5342:Stk16	UTSW	1	75,189,609 (GRCm39)	missense	probably benign	0.31
R5699:Stk16	UTSW	1	75,190,248 (GRCm39)	missense	probably damaging	1.00
R7445:Stk16	UTSW	1	75,190,296 (GRCm39)	missense	probably damaging	1.00
R7737:Stk16	UTSW	1	75,187,995 (GRCm39)	missense	probably damaging	1.00
R8699:Stk16	UTSW	1	75,188,682 (GRCm39)	missense	probably benign	0.12
R9456:Stk16	UTSW	1	75,187,804 (GRCm39)	critical splice donor site	probably benign

Predicted Primers

PCR Primer
(F):5'- GGTTATGCACACAGGTCAGTGG -3'
(R):5'- CCCAGAGCTCAAAAGTGGAG -3'

Sequencing Primer
(F):5'- GCCCTATGCATTTGATGAAGCCAG -3'
(R):5'- TGGAGCACAAGCCATATCATGTG -3'

Posted On

2019-12-20