Mutagenetix > Incidental Mutations

Incidental Mutation 'R7887:Vmn1r201'

609130

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r201

Ensembl Gene

ENSMUSG00000094898

Gene Name

vomeronasal 1 receptor 201

Synonyms

V1ri4

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.176) question?

Stock #

R7887 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

22471923-22478701 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 22474786 bp

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Phenylalanine at position 57 (I57F)

Ref Sequence

ENSEMBL: ENSMUSP00000089324 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000091730] [ENSMUST00000226330] [ENSMUST00000226965]

Predicted Effect

probably damaging
Transcript: ENSMUST00000091730
AA Change: I57F

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000089324
Gene: ENSMUSG00000094898
AA Change: I57F

Domain	Start	End	E-Value	Type
Pfam:TAS2R	1	293	2.4e-9	PFAM
Pfam:V1R	35	299	1.1e-40	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000226330
AA Change: I57F

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)

Predicted Effect

probably damaging
Transcript: ENSMUST00000226965
AA Change: I57F

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.2%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Alkbh8	T	A	9: 3,385,343	I580N	probably damaging	Het
Ankrd35	C	T	3: 96,684,900	T834M	probably damaging	Het
Astn2	C	T	4: 65,644,866	V893I	possibly damaging	Het
B4galt1	A	G	4: 40,823,501	Y197H	probably benign	Het
Brdt	T	C	5: 107,359,933	S676P	possibly damaging	Het
Chrdl2	T	C	7: 100,029,250	V343A	possibly damaging	Het
Clcn3	A	T	8: 60,941,399	M59K	probably benign	Het
Cpne4	A	T	9: 105,032,791	N529I	probably damaging	Het
Crcp	G	T	5: 130,037,870	K32N	possibly damaging	Het
Ddx54	C	T	5: 120,627,203	R846C	probably damaging	Het
Dennd6a	T	C	14: 26,599,657	S118P	possibly damaging	Het
Egr3	A	G	14: 70,079,202	Y116C	probably damaging	Het
Fbxw25	A	G	9: 109,649,594		probably null	Het
Focad	T	G	4: 88,182,616	I313M	probably damaging	Het
Gm10272	C	T	10: 77,706,945	P107L	probably benign	Het
Gpr26	A	C	7: 131,966,973	I16L	probably benign	Het
Gpr39	C	A	1: 125,677,542	T69K	probably damaging	Het
Hacl1	C	T	14: 31,634,227	G97S	probably damaging	Het
Idh3b	A	C	2: 130,281,758	D136E	probably damaging	Het
Irf6	G	A	1: 193,167,732	V321M	probably damaging	Het
Klrg2	T	A	6: 38,636,571	T166S	probably damaging	Het
Lnx2	T	C	5: 147,019,043	I648V	probably damaging	Het
Mnat1	T	A	12: 73,188,191	S205T	probably benign	Het
Mpnd	G	A	17: 56,011,097	G204D	probably benign	Het
Myh7	C	T	14: 54,983,662	E935K	possibly damaging	Het
Nid1	G	T	13: 13,499,733	R899L	possibly damaging	Het
Nisch	C	T	14: 31,176,695	W664*	probably null	Het
Nudt6	C	T	3: 37,412,380	V157I	possibly damaging	Het
Olfr1156	T	C	2: 87,949,880	M118V	probably damaging	Het
Olfr573-ps1	A	C	7: 102,942,151	L142R	possibly damaging	Het
Olfr949-ps1	A	T	9: 39,364,879	M107L	unknown	Het
Onecut2	T	A	18: 64,340,975	M180K	possibly damaging	Het
Parg	T	A	14: 32,217,662	D548E	possibly damaging	Het
Pclo	GTCTAT	GTCTATTCTAT	5: 14,714,190		probably null	Het
Phf11d	A	G	14: 59,359,580	Y57H	probably damaging	Het
Prkaca	T	C	8: 83,986,895	V99A	probably benign	Het
Rnf144b	T	A	13: 47,239,811	C209S	probably damaging	Het
Scly	G	A	1: 91,300,641		probably null	Het
Selplg	GTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCT	GTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATGGGTGCTGGCTGCGAGGTCTCT	5: 113,819,695		probably benign	Het
Sphkap	T	C	1: 83,277,412	Y872C	probably benign	Het
Ssh1	C	T	5: 113,961,349		probably null	Het
Strap	T	G	6: 137,739,809	L129V	possibly damaging	Het
Sympk	T	C	7: 19,034,439	I111T	possibly damaging	Het
Tprn	C	A	2: 25,264,012	A442E	probably damaging	Het
Tsen34	T	C	7: 3,694,708	L36P	probably damaging	Het
Ubr4	T	C	4: 139,407,810	F818L	probably damaging	Het
Uggt1	T	C	1: 36,208,034	Y294C	probably damaging	Het
Usp20	A	G	2: 31,020,894	K862E	probably benign	Het
Wdr64	C	T	1: 175,785,545	A662V	not run	Het

Other mutations in Vmn1r201

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02792:Vmn1r201	APN	13	22474844	missense	probably damaging	0.97
IGL03137:Vmn1r201	APN	13	22474804	missense	probably benign	0.01
R0278:Vmn1r201	UTSW	13	22475024	missense	probably damaging	1.00
R0381:Vmn1r201	UTSW	13	22475023	missense	probably damaging	1.00
R0544:Vmn1r201	UTSW	13	22475146	missense	probably benign	0.04
R1411:Vmn1r201	UTSW	13	22474679	missense	probably benign	0.01
R1544:Vmn1r201	UTSW	13	22474798	missense	probably benign	0.20
R1850:Vmn1r201	UTSW	13	22474631	missense	probably benign	0.08
R1891:Vmn1r201	UTSW	13	22475255	missense	probably benign	0.01
R2071:Vmn1r201	UTSW	13	22474825	missense	probably benign	0.34
R4183:Vmn1r201	UTSW	13	22474852	missense	probably benign	0.01
R4924:Vmn1r201	UTSW	13	22474712	missense	probably benign	0.00
R4989:Vmn1r201	UTSW	13	22475452	missense	possibly damaging	0.95
R5028:Vmn1r201	UTSW	13	22475360	nonsense	probably null
R5318:Vmn1r201	UTSW	13	22474922	missense	probably damaging	1.00
R5369:Vmn1r201	UTSW	13	22475502	missense	probably benign	0.00
R5682:Vmn1r201	UTSW	13	22475185	missense	probably damaging	0.99
R5699:Vmn1r201	UTSW	13	22475239	missense	probably damaging	1.00
R6180:Vmn1r201	UTSW	13	22475329	missense	possibly damaging	0.94
R6273:Vmn1r201	UTSW	13	22475215	missense	probably damaging	1.00
R6295:Vmn1r201	UTSW	13	22475363	missense	probably benign	0.00
R6331:Vmn1r201	UTSW	13	22475351	missense	probably damaging	1.00
R7296:Vmn1r201	UTSW	13	22475339	missense	possibly damaging	0.69
R7758:Vmn1r201	UTSW	13	22474819	missense	not run
R7832:Vmn1r201	UTSW	13	22475368	missense	possibly damaging	0.76
R7915:Vmn1r201	UTSW	13	22475368	missense	possibly damaging	0.76
R7970:Vmn1r201	UTSW	13	22474786	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- CCTTTGTTTCGATCAGAATAGCAG -3'
(R):5'- CCAAATGGTTGTCCTGGGAC -3'

Sequencing Primer
(F):5'- ATAGCAGAGAAAGTTGTGTGTGATTC -3'
(R):5'- CAAATGGTTGTCCTGGGACTGATG -3'

Posted On

2019-12-20