Incidental Mutation 'R7908:Pcdh15'
ID 610294
Institutional Source Beutler Lab
Gene Symbol Pcdh15
Ensembl Gene ENSMUSG00000052613
Gene Name protocadherin 15
Synonyms Gm9815, nmf19, roda, Ush1f
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R7908 (G1)
Quality Score 225.009
Status Not validated
Chromosome 10
Chromosomal Location 72935174-74485569 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 74479414 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Aspartic acid at position 508 (E508D)
Ref Sequence ENSEMBL: ENSMUSP00000115399 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000124046] [ENSMUST00000125517] [ENSMUST00000131724] [ENSMUST00000144302] [ENSMUST00000146682] [ENSMUST00000149977] [ENSMUST00000151116] [ENSMUST00000152655] [ENSMUST00000152819] [ENSMUST00000155701] [ENSMUST00000177107] [ENSMUST00000191709] [ENSMUST00000191854] [ENSMUST00000193174] [ENSMUST00000193739] [ENSMUST00000195531]
AlphaFold Q99PJ1
Predicted Effect probably benign
Transcript: ENSMUST00000124046
SMART Domains Protein: ENSMUSP00000121130
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
CA 30 118 7.87e-9 SMART
CA 142 224 4.88e-14 SMART
CA 249 326 4.65e-20 SMART
CA 350 428 1.93e-26 SMART
CA 452 535 5.69e-15 SMART
CA 559 645 6.85e-9 SMART
CA 666 753 3.09e-16 SMART
CA 777 861 4.49e-4 SMART
transmembrane domain 986 1008 N/A INTRINSIC
low complexity region 1029 1056 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000125517
AA Change: E508D

PolyPhen 2 Score 0.038 (Sensitivity: 0.94; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000115399
Gene: ENSMUSG00000052613
AA Change: E508D

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
low complexity region 430 468 N/A INTRINSIC
low complexity region 521 584 N/A INTRINSIC
low complexity region 610 641 N/A INTRINSIC
low complexity region 657 685 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000131724
SMART Domains Protein: ENSMUSP00000122466
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000144302
SMART Domains Protein: ENSMUSP00000122606
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
low complexity region 313 326 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000146682
SMART Domains Protein: ENSMUSP00000134863
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
transmembrane domain 128 150 N/A INTRINSIC
low complexity region 215 232 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000149977
SMART Domains Protein: ENSMUSP00000118833
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
low complexity region 1477 1494 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000151116
AA Change: E1579D

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
SMART Domains Protein: ENSMUSP00000119662
Gene: ENSMUSG00000052613
AA Change: E1579D

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 519 7.87e-9 SMART
CA 543 625 4.88e-14 SMART
CA 650 727 4.65e-20 SMART
CA 751 829 1.93e-26 SMART
CA 853 936 5.69e-15 SMART
CA 960 1046 6.85e-9 SMART
CA 1067 1154 3.09e-16 SMART
CA 1178 1262 4.49e-4 SMART
transmembrane domain 1387 1409 N/A INTRINSIC
low complexity region 1430 1457 N/A INTRINSIC
low complexity region 1489 1519 N/A INTRINSIC
low complexity region 1521 1539 N/A INTRINSIC
low complexity region 1592 1655 N/A INTRINSIC
low complexity region 1681 1712 N/A INTRINSIC
low complexity region 1728 1756 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000152655
AA Change: E770D

PolyPhen 2 Score 0.893 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000118201
Gene: ENSMUSG00000052613
AA Change: E770D

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 6e-4 SMART
CA 174 263 2.8e-10 SMART
CA 304 393 9.4e-11 SMART
CA 426 507 1.2e-12 SMART
CA 531 613 2.3e-16 SMART
CA 638 726 3.4e-6 SMART
low complexity region 783 846 N/A INTRINSIC
low complexity region 872 903 N/A INTRINSIC
low complexity region 919 947 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000152819
AA Change: E439D

PolyPhen 2 Score 0.038 (Sensitivity: 0.94; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000123647
Gene: ENSMUSG00000052613
AA Change: E439D

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
Blast:CA 304 363 1e-33 BLAST
low complexity region 364 399 N/A INTRINSIC
low complexity region 452 515 N/A INTRINSIC
low complexity region 541 572 N/A INTRINSIC
low complexity region 588 616 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000155701
SMART Domains Protein: ENSMUSP00000135495
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
Blast:CA 304 330 2e-8 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000177107
SMART Domains Protein: ENSMUSP00000135501
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1380 1402 N/A INTRINSIC
low complexity region 1423 1450 N/A INTRINSIC
low complexity region 1482 1499 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000191709
AA Change: E1570D

PolyPhen 2 Score 0.711 (Sensitivity: 0.86; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000142313
Gene: ENSMUSG00000052613
AA Change: E1570D

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1380 1402 N/A INTRINSIC
low complexity region 1423 1450 N/A INTRINSIC
low complexity region 1480 1510 N/A INTRINSIC
low complexity region 1512 1530 N/A INTRINSIC
low complexity region 1583 1646 N/A INTRINSIC
low complexity region 1672 1703 N/A INTRINSIC
low complexity region 1719 1747 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000191854
SMART Domains Protein: ENSMUSP00000141973
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
low complexity region 1477 1494 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000193174
AA Change: E1572D
SMART Domains Protein: ENSMUSP00000142238
Gene: ENSMUSG00000052613
AA Change: E1572D

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 6e-4 SMART
CA 174 263 2.8e-10 SMART
CA 304 393 9.4e-11 SMART
CA 426 514 3.8e-11 SMART
CA 538 620 2.3e-16 SMART
CA 645 722 2.3e-22 SMART
CA 746 824 9.3e-29 SMART
CA 848 931 2.8e-17 SMART
CA 955 1041 3.3e-11 SMART
CA 1062 1149 1.5e-18 SMART
CA 1173 1257 2.3e-6 SMART
transmembrane domain 1382 1404 N/A INTRINSIC
low complexity region 1425 1452 N/A INTRINSIC
low complexity region 1482 1512 N/A INTRINSIC
low complexity region 1514 1532 N/A INTRINSIC
low complexity region 1585 1648 N/A INTRINSIC
low complexity region 1674 1705 N/A INTRINSIC
low complexity region 1721 1749 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000193739
SMART Domains Protein: ENSMUSP00000142173
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1382 1404 N/A INTRINSIC
low complexity region 1420 1447 N/A INTRINSIC
low complexity region 1477 1494 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000195531
SMART Domains Protein: ENSMUSP00000141920
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 6e-4 SMART
CA 174 263 2.8e-10 SMART
CA 304 393 9.4e-11 SMART
CA 426 507 1.2e-12 SMART
CA 531 613 2.3e-16 SMART
CA 638 715 2.3e-22 SMART
CA 739 817 9.3e-29 SMART
CA 841 924 2.8e-17 SMART
CA 948 1034 3.3e-11 SMART
CA 1055 1142 1.5e-18 SMART
CA 1166 1250 2.3e-6 SMART
transmembrane domain 1377 1399 N/A INTRINSIC
low complexity region 1415 1442 N/A INTRINSIC
low complexity region 1514 1531 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.6%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the cadherin superfamily. Family members encode integral membrane proteins that mediate calcium-dependent cell-cell adhesion. It plays an essential role in maintenance of normal retinal and cochlear function. Mutations in this gene result in hearing loss and Usher Syndrome Type IF (USH1F). Extensive alternative splicing resulting in multiple isoforms has been observed in the mouse ortholog. Similar alternatively spliced transcripts are inferred to occur in human, and additional variants are likely to occur. [provided by RefSeq, Dec 2008]
PHENOTYPE: Homozygotes for severe mutations exhibit circling, head-tossing, hyperactivity, impaired swimming and profound deafness. Mice have defects in cochlea and degeneration of hair cells, spiral ganglion cells and saccular macula. Females are poor mothers. [provided by MGI curators]
Allele List at MGI

All alleles(11) : Gene trapped(2) Transgenic(1) Spontaneous(6) Chemically induced(2)
Other mutations in this stock
Total: 77 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A4galt A G 15: 83,112,577 (GRCm39) F69L probably benign Het
Acsf3 A G 8: 123,512,562 (GRCm39) M328V probably damaging Het
Adam10 T G 9: 70,669,046 (GRCm39) V454G possibly damaging Het
Adamts15 T C 9: 30,813,522 (GRCm39) D881G probably benign Het
Adamtsl1 T C 4: 86,274,676 (GRCm39) V1244A probably benign Het
Ankfn1 G A 11: 89,296,360 (GRCm39) P123L probably damaging Het
Aox1 T C 1: 58,145,227 (GRCm39) I1331T possibly damaging Het
Atg14 T A 14: 47,806,050 (GRCm39) probably benign Het
Bmal1 A T 7: 112,912,680 (GRCm39) I579L probably benign Het
Btnl4 A G 17: 34,692,161 (GRCm39) M147T possibly damaging Het
Camk1g T C 1: 193,042,082 (GRCm39) K56E probably damaging Het
Capn7 T C 14: 31,088,202 (GRCm39) probably null Het
Cbln1 T A 8: 88,198,724 (GRCm39) T49S probably benign Het
Cc2d2a T C 5: 43,864,188 (GRCm39) V763A probably benign Het
Cdc40 A G 10: 40,724,042 (GRCm39) Y249H probably damaging Het
Cfap61 T A 2: 145,944,019 (GRCm39) L762H probably damaging Het
Cfap68 T A 9: 50,675,248 (GRCm39) T153S possibly damaging Het
Cfap73 T C 5: 120,768,123 (GRCm39) T212A probably benign Het
Cfi A G 3: 129,642,233 (GRCm39) E29G probably benign Het
Chmp6 A T 11: 119,804,656 (GRCm39) probably benign Het
Clec14a T C 12: 58,314,465 (GRCm39) T386A possibly damaging Het
Coq6 T A 12: 84,417,940 (GRCm39) L268H probably damaging Het
Cpt1a T C 19: 3,412,202 (GRCm39) S225P probably benign Het
Dhx58 C A 11: 100,586,130 (GRCm39) L630F probably damaging Het
Dlg2 T A 7: 91,549,981 (GRCm39) V158E probably damaging Het
Fcgbpl1 A T 7: 27,846,921 (GRCm39) Y1168F probably benign Het
Foxd3 A G 4: 99,545,576 (GRCm39) T239A probably benign Het
Galnt6 T C 15: 100,601,242 (GRCm39) T346A probably damaging Het
Guca1b C G 17: 47,702,102 (GRCm39) T185S unknown Het
H2-M5 T C 17: 37,298,571 (GRCm39) T292A probably benign Het
Hlx T C 1: 184,459,773 (GRCm39) H455R probably benign Het
Hydin A G 8: 111,237,499 (GRCm39) Y1924C probably benign Het
Ighg2b C T 12: 113,270,074 (GRCm39) V315M Het
Ildr2 A G 1: 166,135,369 (GRCm39) K374E probably damaging Het
Jmjd1c T C 10: 67,061,621 (GRCm39) S1144P probably benign Het
Kcnj8 T C 6: 142,511,755 (GRCm39) D284G probably benign Het
Kri1 TTCCTCCTCCTCCTCCTCCTCCTCCTCCTC TTCCTCCTCCTCCTCCTCCTCCTCCTC 9: 21,192,352 (GRCm39) probably benign Het
Lingo4 A G 3: 94,309,541 (GRCm39) T160A probably benign Het
Lmod3 G T 6: 97,225,434 (GRCm39) A129E probably benign Het
Lrrk2 T C 15: 91,610,355 (GRCm39) C696R probably damaging Het
Mc2r A G 18: 68,541,036 (GRCm39) F86L probably benign Het
Mppe1 T G 18: 67,362,055 (GRCm39) K170T probably benign Het
Mtcl1 A G 17: 66,678,325 (GRCm39) I667T possibly damaging Het
Mtnr1a A T 8: 45,540,863 (GRCm39) I275F probably benign Het
Myh2 A G 11: 67,088,197 (GRCm39) I1938V probably benign Het
Npsr1 A T 9: 24,201,096 (GRCm39) E160V probably damaging Het
Or13c7b T A 4: 43,821,086 (GRCm39) I92F probably damaging Het
Or5ac23 C T 16: 59,149,606 (GRCm39) D89N possibly damaging Het
Or6c3 T A 10: 129,308,867 (GRCm39) I102N probably damaging Het
Ovch2 T A 7: 107,388,326 (GRCm39) Y418F probably damaging Het
Pak5 A G 2: 135,958,479 (GRCm39) L203S probably benign Het
Prl7a1 T C 13: 27,826,433 (GRCm39) M1V probably null Het
Prorp A T 12: 55,426,250 (GRCm39) K533N possibly damaging Het
Prpsap2 G T 11: 61,647,098 (GRCm39) N14K possibly damaging Het
Rad54b T A 4: 11,595,868 (GRCm39) V215E probably null Het
Ryr2 G A 13: 11,807,634 (GRCm39) T845I probably benign Het
Scgb2b3 G A 7: 31,061,439 (GRCm39) T20I probably damaging Het
Serpina1b T C 12: 103,694,566 (GRCm39) I393V possibly damaging Het
Slc13a5 T C 11: 72,149,890 (GRCm39) M207V probably benign Het
Slc49a3 T C 5: 108,592,363 (GRCm39) I276V probably benign Het
Smg1 A T 7: 117,785,357 (GRCm39) L843M unknown Het
Sp100 T C 1: 85,635,788 (GRCm39) V531A possibly damaging Het
Srsf6 T C 2: 162,775,760 (GRCm39) S190P unknown Het
Stil A G 4: 114,889,896 (GRCm39) K795E possibly damaging Het
Sugp2 A G 8: 70,704,577 (GRCm39) R705G probably benign Het
Tnfrsf11a T A 1: 105,737,099 (GRCm39) C69S probably damaging Het
Trim30a A T 7: 104,070,656 (GRCm39) N252K probably benign Het
Tshz1 T A 18: 84,032,732 (GRCm39) K559* probably null Het
Ttbk1 C T 17: 46,789,864 (GRCm39) R133H probably damaging Het
Vmn1r1 T C 1: 181,984,915 (GRCm39) Y250C probably benign Het
Vmn2r12 A G 5: 109,234,307 (GRCm39) L635P probably damaging Het
Vmn2r52 C A 7: 9,896,877 (GRCm39) V532L probably benign Het
Vwa5b1 A T 4: 138,296,481 (GRCm39) L1182* probably null Het
Washc2 A G 6: 116,225,106 (GRCm39) D818G probably benign Het
Xylb T G 9: 119,210,611 (GRCm39) S365A probably benign Het
Zcchc8 T C 5: 123,858,783 (GRCm39) probably benign Het
Zdbf2 T C 1: 63,345,986 (GRCm39) I1455T possibly damaging Het
Other mutations in Pcdh15
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00421:Pcdh15 APN 10 74,021,177 (GRCm39) nonsense probably null
IGL00432:Pcdh15 APN 10 74,126,914 (GRCm39) splice site probably benign
IGL00533:Pcdh15 APN 10 74,338,552 (GRCm39) missense probably damaging 1.00
IGL00596:Pcdh15 APN 10 74,466,576 (GRCm39) missense probably benign 0.00
IGL00930:Pcdh15 APN 10 74,466,530 (GRCm39) missense probably benign 0.08
IGL00970:Pcdh15 APN 10 74,215,172 (GRCm39) missense probably damaging 1.00
IGL01087:Pcdh15 APN 10 74,178,464 (GRCm39) missense possibly damaging 0.90
IGL01763:Pcdh15 APN 10 74,046,293 (GRCm39) missense probably benign 0.09
IGL01787:Pcdh15 APN 10 74,286,115 (GRCm39) missense probably benign 0.25
IGL02070:Pcdh15 APN 10 74,466,700 (GRCm39) missense probably benign 0.00
IGL02234:Pcdh15 APN 10 74,467,694 (GRCm39) missense probably benign 0.02
IGL02268:Pcdh15 APN 10 74,178,504 (GRCm39) missense probably damaging 1.00
IGL02280:Pcdh15 APN 10 74,058,295 (GRCm39) missense probably damaging 1.00
IGL02363:Pcdh15 APN 10 74,152,918 (GRCm39) missense probably damaging 0.98
IGL02420:Pcdh15 APN 10 74,138,938 (GRCm39) missense probably damaging 0.98
IGL02749:Pcdh15 APN 10 74,466,900 (GRCm39) missense probably benign 0.00
IGL02939:Pcdh15 APN 10 74,340,648 (GRCm39) splice site probably benign
IGL02970:Pcdh15 APN 10 74,126,794 (GRCm39) splice site probably benign
IGL03010:Pcdh15 APN 10 74,221,777 (GRCm39) missense probably damaging 1.00
IGL03061:Pcdh15 APN 10 74,152,843 (GRCm39) missense probably damaging 0.97
IGL03095:Pcdh15 APN 10 74,191,706 (GRCm39) missense probably damaging 1.00
IGL03149:Pcdh15 APN 10 74,466,527 (GRCm39) missense probably damaging 1.00
IGL03187:Pcdh15 APN 10 74,191,706 (GRCm39) missense probably damaging 1.00
IGL03279:Pcdh15 APN 10 74,152,904 (GRCm39) missense probably damaging 1.00
IGL03392:Pcdh15 APN 10 74,460,104 (GRCm39) missense probably damaging 1.00
loop UTSW 10 74,021,210 (GRCm39) missense probably damaging 1.00
mcduck UTSW 10 74,462,676 (GRCm39) critical splice donor site probably null
spaz UTSW 10 74,046,257 (GRCm39) missense probably damaging 1.00
sphere UTSW 10 74,460,116 (GRCm39) missense probably damaging 1.00
squirm UTSW 10 0 () large deletion
Tortilla UTSW 10 74,215,249 (GRCm39) splice site probably null
1mM(1):Pcdh15 UTSW 10 74,461,969 (GRCm39) intron probably benign
BB009:Pcdh15 UTSW 10 74,481,359 (GRCm39) missense probably benign 0.18
BB019:Pcdh15 UTSW 10 74,481,359 (GRCm39) missense probably benign 0.18
R0038:Pcdh15 UTSW 10 74,479,272 (GRCm39) missense possibly damaging 0.95
R0103:Pcdh15 UTSW 10 74,046,257 (GRCm39) missense probably damaging 1.00
R0110:Pcdh15 UTSW 10 74,126,808 (GRCm39) missense probably damaging 1.00
R0111:Pcdh15 UTSW 10 74,462,651 (GRCm39) nonsense probably null
R0119:Pcdh15 UTSW 10 74,006,407 (GRCm39) missense probably damaging 1.00
R0131:Pcdh15 UTSW 10 74,006,440 (GRCm39) missense probably null 1.00
R0445:Pcdh15 UTSW 10 74,178,381 (GRCm39) missense probably damaging 1.00
R0464:Pcdh15 UTSW 10 74,462,676 (GRCm39) critical splice donor site probably null
R0503:Pcdh15 UTSW 10 74,046,217 (GRCm39) missense probably damaging 1.00
R0507:Pcdh15 UTSW 10 74,457,129 (GRCm39) missense probably damaging 1.00
R0510:Pcdh15 UTSW 10 74,126,808 (GRCm39) missense probably damaging 1.00
R0742:Pcdh15 UTSW 10 74,457,129 (GRCm39) missense probably damaging 1.00
R0790:Pcdh15 UTSW 10 74,466,885 (GRCm39) missense probably benign 0.01
R0829:Pcdh15 UTSW 10 74,338,598 (GRCm39) missense probably damaging 1.00
R0839:Pcdh15 UTSW 10 74,462,614 (GRCm39) missense probably null 1.00
R0882:Pcdh15 UTSW 10 74,178,488 (GRCm39) missense probably damaging 1.00
R0894:Pcdh15 UTSW 10 74,460,087 (GRCm39) missense probably damaging 1.00
R0944:Pcdh15 UTSW 10 74,046,302 (GRCm39) missense probably damaging 0.99
R1081:Pcdh15 UTSW 10 74,286,145 (GRCm39) missense probably damaging 1.00
R1148:Pcdh15 UTSW 10 74,006,392 (GRCm39) missense probably damaging 1.00
R1148:Pcdh15 UTSW 10 74,006,392 (GRCm39) missense probably damaging 1.00
R1484:Pcdh15 UTSW 10 74,126,833 (GRCm39) missense probably damaging 1.00
R1521:Pcdh15 UTSW 10 74,430,023 (GRCm39) missense probably damaging 1.00
R1694:Pcdh15 UTSW 10 74,429,995 (GRCm39) missense probably damaging 1.00
R1795:Pcdh15 UTSW 10 74,460,087 (GRCm39) missense probably damaging 1.00
R2021:Pcdh15 UTSW 10 74,467,025 (GRCm39) missense possibly damaging 0.93
R2022:Pcdh15 UTSW 10 74,467,025 (GRCm39) missense possibly damaging 0.93
R2023:Pcdh15 UTSW 10 74,467,025 (GRCm39) missense possibly damaging 0.93
R2076:Pcdh15 UTSW 10 74,178,479 (GRCm39) missense probably damaging 1.00
R2199:Pcdh15 UTSW 10 74,006,341 (GRCm39) missense probably damaging 1.00
R2510:Pcdh15 UTSW 10 74,467,331 (GRCm39) missense probably benign 0.39
R2511:Pcdh15 UTSW 10 74,481,828 (GRCm39) missense possibly damaging 0.94
R3418:Pcdh15 UTSW 10 74,420,054 (GRCm39) missense probably benign 0.12
R3419:Pcdh15 UTSW 10 74,420,054 (GRCm39) missense probably benign 0.12
R3433:Pcdh15 UTSW 10 74,467,331 (GRCm39) missense probably benign 0.39
R3619:Pcdh15 UTSW 10 74,479,227 (GRCm39) missense probably benign 0.19
R3723:Pcdh15 UTSW 10 74,481,680 (GRCm39) missense probably benign 0.05
R3724:Pcdh15 UTSW 10 74,481,680 (GRCm39) missense probably benign 0.05
R3778:Pcdh15 UTSW 10 73,782,983 (GRCm39) splice site probably null
R3851:Pcdh15 UTSW 10 74,467,518 (GRCm39) missense probably damaging 0.97
R4175:Pcdh15 UTSW 10 74,467,829 (GRCm39) intron probably benign
R4261:Pcdh15 UTSW 10 74,481,512 (GRCm39) missense probably damaging 1.00
R4385:Pcdh15 UTSW 10 74,386,322 (GRCm39) missense probably damaging 1.00
R4585:Pcdh15 UTSW 10 74,460,116 (GRCm39) missense probably damaging 1.00
R4602:Pcdh15 UTSW 10 74,430,046 (GRCm39) missense probably damaging 1.00
R4639:Pcdh15 UTSW 10 74,479,439 (GRCm39) missense probably benign 0.00
R4703:Pcdh15 UTSW 10 74,285,995 (GRCm39) missense probably damaging 1.00
R4819:Pcdh15 UTSW 10 74,160,221 (GRCm39) missense probably damaging 1.00
R4906:Pcdh15 UTSW 10 74,340,625 (GRCm39) nonsense probably null
R4961:Pcdh15 UTSW 10 74,215,249 (GRCm39) splice site probably null
R5018:Pcdh15 UTSW 10 74,479,607 (GRCm39) missense possibly damaging 0.68
R5125:Pcdh15 UTSW 10 74,419,912 (GRCm39) missense probably damaging 0.98
R5225:Pcdh15 UTSW 10 74,138,986 (GRCm39) missense probably damaging 1.00
R5259:Pcdh15 UTSW 10 74,232,204 (GRCm39) missense possibly damaging 0.67
R5279:Pcdh15 UTSW 10 74,430,015 (GRCm39) missense probably damaging 1.00
R5395:Pcdh15 UTSW 10 74,021,119 (GRCm39) missense probably damaging 1.00
R5458:Pcdh15 UTSW 10 74,340,611 (GRCm39) missense probably damaging 1.00
R5617:Pcdh15 UTSW 10 74,471,504 (GRCm39) intron probably benign
R5665:Pcdh15 UTSW 10 74,462,620 (GRCm39) missense probably damaging 1.00
R5770:Pcdh15 UTSW 10 74,021,177 (GRCm39) nonsense probably null
R5805:Pcdh15 UTSW 10 74,066,091 (GRCm39) missense probably damaging 1.00
R5914:Pcdh15 UTSW 10 74,466,768 (GRCm39) missense probably benign 0.42
R5988:Pcdh15 UTSW 10 74,215,189 (GRCm39) missense probably benign 0.05
R6133:Pcdh15 UTSW 10 74,481,805 (GRCm39) splice site probably null
R6189:Pcdh15 UTSW 10 74,178,483 (GRCm39) missense probably null 1.00
R6414:Pcdh15 UTSW 10 74,021,258 (GRCm39) missense probably damaging 1.00
R6536:Pcdh15 UTSW 10 74,467,221 (GRCm39) missense probably damaging 1.00
R6612:Pcdh15 UTSW 10 74,021,210 (GRCm39) missense probably damaging 1.00
R6711:Pcdh15 UTSW 10 74,478,219 (GRCm39) missense possibly damaging 0.83
R6793:Pcdh15 UTSW 10 74,466,971 (GRCm39) missense probably damaging 1.00
R6841:Pcdh15 UTSW 10 74,286,052 (GRCm39) missense probably damaging 1.00
R6845:Pcdh15 UTSW 10 74,466,465 (GRCm39) missense probably benign
R6915:Pcdh15 UTSW 10 74,479,641 (GRCm39) missense probably benign 0.16
R6954:Pcdh15 UTSW 10 74,481,821 (GRCm39) missense possibly damaging 0.92
R6970:Pcdh15 UTSW 10 74,338,519 (GRCm39) missense probably damaging 0.98
R7018:Pcdh15 UTSW 10 74,302,186 (GRCm39) missense probably damaging 1.00
R7064:Pcdh15 UTSW 10 74,466,446 (GRCm39) missense possibly damaging 0.67
R7079:Pcdh15 UTSW 10 74,152,957 (GRCm39) missense probably benign 0.21
R7172:Pcdh15 UTSW 10 74,338,597 (GRCm39) missense probably damaging 1.00
R7220:Pcdh15 UTSW 10 74,178,441 (GRCm39) missense possibly damaging 0.64
R7237:Pcdh15 UTSW 10 74,420,023 (GRCm39) missense possibly damaging 0.88
R7266:Pcdh15 UTSW 10 74,215,222 (GRCm39) nonsense probably null
R7276:Pcdh15 UTSW 10 74,160,224 (GRCm39) missense probably benign 0.25
R7359:Pcdh15 UTSW 10 74,420,048 (GRCm39) missense probably damaging 0.99
R7396:Pcdh15 UTSW 10 74,466,522 (GRCm39) missense probably benign 0.17
R7421:Pcdh15 UTSW 10 74,289,897 (GRCm39) missense possibly damaging 0.90
R7424:Pcdh15 UTSW 10 74,342,317 (GRCm39) missense probably benign 0.09
R7463:Pcdh15 UTSW 10 74,467,602 (GRCm39) missense possibly damaging 0.66
R7469:Pcdh15 UTSW 10 74,481,812 (GRCm39) missense probably benign
R7512:Pcdh15 UTSW 10 74,477,214 (GRCm39) missense possibly damaging 0.81
R7767:Pcdh15 UTSW 10 74,322,088 (GRCm39) missense probably benign 0.07
R7830:Pcdh15 UTSW 10 74,221,733 (GRCm39) missense probably damaging 1.00
R7890:Pcdh15 UTSW 10 74,478,146 (GRCm39) missense probably damaging 1.00
R7897:Pcdh15 UTSW 10 74,289,827 (GRCm39) missense probably damaging 1.00
R7932:Pcdh15 UTSW 10 74,481,359 (GRCm39) missense probably benign 0.18
R7940:Pcdh15 UTSW 10 74,430,022 (GRCm39) missense probably damaging 1.00
R8230:Pcdh15 UTSW 10 74,191,707 (GRCm39) missense probably damaging 1.00
R8307:Pcdh15 UTSW 10 74,342,307 (GRCm39) nonsense probably null
R8382:Pcdh15 UTSW 10 74,479,227 (GRCm39) missense probably benign 0.19
R8397:Pcdh15 UTSW 10 74,126,865 (GRCm39) missense probably damaging 1.00
R8498:Pcdh15 UTSW 10 74,317,974 (GRCm39) missense probably damaging 1.00
R8692:Pcdh15 UTSW 10 74,289,805 (GRCm39) missense possibly damaging 0.63
R8797:Pcdh15 UTSW 10 74,419,978 (GRCm39) missense probably damaging 1.00
R9020:Pcdh15 UTSW 10 74,481,443 (GRCm39) missense probably benign 0.01
R9033:Pcdh15 UTSW 10 74,302,138 (GRCm39) missense probably damaging 1.00
R9056:Pcdh15 UTSW 10 74,221,731 (GRCm39) missense probably damaging 1.00
R9177:Pcdh15 UTSW 10 74,479,455 (GRCm39) missense probably benign 0.13
R9191:Pcdh15 UTSW 10 74,161,981 (GRCm39) missense probably benign 0.38
R9268:Pcdh15 UTSW 10 74,479,455 (GRCm39) missense probably benign 0.13
R9279:Pcdh15 UTSW 10 74,461,756 (GRCm39) intron probably benign
R9294:Pcdh15 UTSW 10 74,479,560 (GRCm39) missense unknown
R9387:Pcdh15 UTSW 10 74,066,192 (GRCm39) missense probably damaging 0.98
R9409:Pcdh15 UTSW 10 74,160,190 (GRCm39) missense probably damaging 0.98
R9410:Pcdh15 UTSW 10 74,481,663 (GRCm39) frame shift probably null
R9412:Pcdh15 UTSW 10 74,481,663 (GRCm39) frame shift probably null
R9432:Pcdh15 UTSW 10 74,460,170 (GRCm39) missense probably damaging 1.00
R9444:Pcdh15 UTSW 10 74,478,176 (GRCm39) missense probably damaging 1.00
R9579:Pcdh15 UTSW 10 74,457,117 (GRCm39) missense possibly damaging 0.89
R9643:Pcdh15 UTSW 10 74,479,335 (GRCm39) missense probably benign 0.18
R9784:Pcdh15 UTSW 10 74,467,212 (GRCm39) missense probably benign 0.00
RF020:Pcdh15 UTSW 10 74,021,242 (GRCm39) missense probably damaging 1.00
Z1176:Pcdh15 UTSW 10 74,466,533 (GRCm39) missense probably benign 0.00
Z1177:Pcdh15 UTSW 10 74,340,632 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CCCAAAGTTGAAATTAGAGAGCCTAG -3'
(R):5'- AGTGGACTCAGACTCCTCTGAC -3'

Sequencing Primer
(F):5'- TTGAAATTAGAGAGCCTAGTGAGG -3'
(R):5'- TCCTCTGACTCCGGGGTAGAG -3'
Posted On 2019-12-20