Incidental Mutation 'R7246:Usp47'
ID 615890
Institutional Source Beutler Lab
Gene Symbol Usp47
Ensembl Gene ENSMUSG00000059263
Gene Name ubiquitin specific peptidase 47
Synonyms A630020C16Rik, 4930502N04Rik
MMRRC Submission 045309-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.839) question?
Stock # R7246 (G1)
Quality Score 124.009
Status Validated
Chromosome 7
Chromosomal Location 111622692-111710591 bp(+) (GRCm39)
Type of Mutation
DNA Base Change (assembly) T to A at 111715116 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s):
AlphaFold Q8BY87
Meta Mutation Damage Score 0.0852 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.7%
Validation Efficiency 97% (74/76)
MGI Phenotype PHENOTYPE: Mouse embryonic fibroblasts from mice homozygous for a gene trap allele exhibit increased sensitivity to UV irradiation. [provided by MGI curators]
Allele List at MGI

All alleles(10) : Gene trapped(10)

Other mutations in this stock
Total: 70 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921524L21Rik T A 18: 6,635,902 (GRCm39) S318R probably damaging Het
Abce1 A T 8: 80,429,698 (GRCm39) N74K probably damaging Het
Akr1b7 T A 6: 34,392,404 (GRCm39) D72E probably benign Het
Amer3 T A 1: 34,625,809 (GRCm39) I16N possibly damaging Het
Atp6v0d1 T C 8: 106,257,606 (GRCm39) N108D probably damaging Het
Avpr1b T C 1: 131,528,008 (GRCm39) V177A probably damaging Het
B020011L13Rik A T 1: 117,728,969 (GRCm39) K159* probably null Het
Bpifb1 T C 2: 154,049,012 (GRCm39) L172P probably damaging Het
Brca1 G A 11: 101,414,204 (GRCm39) T1310I probably benign Het
C130074G19Rik C A 1: 184,615,166 (GRCm39) R8L probably damaging Het
Ccdc178 T C 18: 22,242,811 (GRCm39) H268R possibly damaging Het
Cdc42ep5 A G 7: 4,154,473 (GRCm39) V105A possibly damaging Het
Cntn4 T C 6: 106,483,180 (GRCm39) L245P probably damaging Het
Crtac1 T C 19: 42,276,365 (GRCm39) E521G probably benign Het
Cts7 T A 13: 61,503,394 (GRCm39) N190I probably damaging Het
Cul7 A G 17: 46,972,993 (GRCm39) E1368G probably benign Het
Dhrs7l A T 12: 72,666,266 (GRCm39) M89K possibly damaging Het
Dpp10 G A 1: 123,262,106 (GRCm39) P759S probably damaging Het
Etf1 A G 18: 35,064,964 (GRCm39) S11P unknown Het
Exd2 G T 12: 80,527,309 (GRCm39) L167F probably damaging Het
Exoc8 T A 8: 125,623,156 (GRCm39) R404* probably null Het
Fat2 T C 11: 55,187,208 (GRCm39) T1213A probably benign Het
Fgfr2 T C 7: 129,844,136 (GRCm39) Het
Gtf3c1 T A 7: 125,268,266 (GRCm39) Het
Id2 T A 12: 25,145,820 (GRCm39) I64F probably damaging Het
Idh3a G T 9: 54,499,756 (GRCm39) A75S probably damaging Het
Ift70a2 A G 2: 75,808,023 (GRCm39) L163P probably damaging Het
Itgb8 C G 12: 119,131,785 (GRCm39) G620A probably damaging Het
Itih5 T A 2: 10,191,873 (GRCm39) probably null Het
Lamtor5 A T 3: 107,189,336 (GRCm39) D124V probably damaging Het
Mast4 T C 13: 102,930,511 (GRCm39) E439G probably damaging Het
Meltf T G 16: 31,713,680 (GRCm39) L641R probably damaging Het
Mesd G T 7: 83,541,420 (GRCm39) probably benign Het
Nfia C T 4: 97,953,579 (GRCm39) P439L probably damaging Het
Nptx1 A T 11: 119,435,416 (GRCm39) probably null Het
Or1o3 A T 17: 37,573,905 (GRCm39) C217S probably benign Het
Or2j6 T A 7: 139,980,061 (GRCm39) R299S probably benign Het
Or5t7 A G 2: 86,507,633 (GRCm39) F15L probably benign Het
Or7g29 G A 9: 19,286,761 (GRCm39) Q139* probably null Het
Pdss2 T A 10: 43,248,172 (GRCm39) H225Q probably benign Het
Pik3r5 C A 11: 68,383,769 (GRCm39) S529R probably benign Het
Plxna2 T C 1: 194,326,590 (GRCm39) S175P possibly damaging Het
Pom121l12 T A 11: 14,549,551 (GRCm39) W86R probably benign Het
Ppid C T 3: 79,498,740 (GRCm39) probably benign Het
Pramel7 T A 2: 87,322,509 (GRCm39) D85V probably damaging Het
Prune2 C T 19: 17,098,732 (GRCm39) T1412I probably damaging Het
Ptprd T C 4: 76,046,913 (GRCm39) Y204C probably damaging Het
Rasgrp1 G A 2: 117,168,835 (GRCm39) R48* probably null Het
Rbks A G 5: 31,805,127 (GRCm39) S246P possibly damaging Het
Rnf113a2 G T 12: 84,464,451 (GRCm39) M114I possibly damaging Het
Rsf1 GCGGCGGCG GCGGCGGCGCCGGCGGCG 7: 97,229,129 (GRCm39) probably benign Het
Scara3 A G 14: 66,169,093 (GRCm39) S175P probably damaging Het
Slc4a4 T A 5: 89,270,262 (GRCm39) L261Q probably damaging Het
Sparcl1 T C 5: 104,233,023 (GRCm39) I593V probably benign Het
Suclg1 C T 6: 73,253,696 (GRCm39) H115Y unknown Het
Syde2 T A 3: 145,694,510 (GRCm39) C253S probably benign Het
Tecrl A T 5: 83,427,182 (GRCm39) I322N probably damaging Het
Tesmin C T 19: 3,456,965 (GRCm39) A428V probably damaging Het
Thbd T A 2: 148,248,405 (GRCm39) T488S probably benign Het
Tln2 A T 9: 67,170,261 (GRCm39) V876E probably damaging Het
Ttll13 A C 7: 79,903,911 (GRCm39) K280Q probably damaging Het
Unc13b T A 4: 43,172,910 (GRCm39) I1246K unknown Het
Vmn1r192 C T 13: 22,371,944 (GRCm39) R92Q probably damaging Het
Vmn2r111 T C 17: 22,767,695 (GRCm39) T601A probably damaging Het
Vmn2r51 A G 7: 9,836,428 (GRCm39) F118L probably benign Het
Vmn2r74 T A 7: 85,605,173 (GRCm39) I492L probably benign Het
Vmn2r93 C T 17: 18,546,012 (GRCm39) T628I possibly damaging Het
Vps13d C T 4: 144,882,620 (GRCm39) R991K Het
Wdr5b T C 16: 35,862,306 (GRCm39) S142P probably damaging Het
Zfp428 G T 7: 24,215,069 (GRCm39) probably null Het
Other mutations in Usp47
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00481:Usp47 APN 7 111,673,990 (GRCm39) missense probably benign 0.00
IGL00574:Usp47 APN 7 111,662,542 (GRCm39) missense probably damaging 1.00
IGL00975:Usp47 APN 7 111,692,577 (GRCm39) missense probably damaging 1.00
IGL01289:Usp47 APN 7 111,662,565 (GRCm39) missense probably damaging 1.00
IGL01419:Usp47 APN 7 111,687,118 (GRCm39) missense possibly damaging 0.94
IGL01645:Usp47 APN 7 111,654,069 (GRCm39) missense probably damaging 0.96
IGL01871:Usp47 APN 7 111,676,993 (GRCm39) splice site probably benign
IGL02066:Usp47 APN 7 111,663,604 (GRCm39) missense probably damaging 1.00
IGL02122:Usp47 APN 7 111,706,115 (GRCm39) missense probably damaging 0.97
IGL02153:Usp47 APN 7 111,703,256 (GRCm39) missense probably benign 0.00
IGL02550:Usp47 APN 7 111,703,561 (GRCm39) missense probably damaging 1.00
IGL02710:Usp47 APN 7 111,692,132 (GRCm39) missense probably benign 0.01
IGL02756:Usp47 APN 7 111,692,270 (GRCm39) missense possibly damaging 0.76
IGL03093:Usp47 APN 7 111,688,827 (GRCm39) missense probably damaging 1.00
IGL03398:Usp47 APN 7 111,673,710 (GRCm39) missense probably damaging 1.00
0152:Usp47 UTSW 7 111,655,784 (GRCm39) missense probably damaging 0.96
PIT4142001:Usp47 UTSW 7 111,703,548 (GRCm39) splice site probably benign
R0110:Usp47 UTSW 7 111,655,787 (GRCm39) missense possibly damaging 0.88
R0381:Usp47 UTSW 7 111,662,600 (GRCm39) critical splice donor site probably null
R0450:Usp47 UTSW 7 111,655,787 (GRCm39) missense possibly damaging 0.88
R0634:Usp47 UTSW 7 111,707,862 (GRCm39) missense probably damaging 1.00
R0881:Usp47 UTSW 7 111,690,643 (GRCm39) missense possibly damaging 0.51
R1178:Usp47 UTSW 7 111,709,205 (GRCm39) missense possibly damaging 0.68
R1447:Usp47 UTSW 7 111,673,775 (GRCm39) critical splice donor site probably null
R1640:Usp47 UTSW 7 111,682,334 (GRCm39) missense probably damaging 0.99
R1727:Usp47 UTSW 7 111,685,307 (GRCm39) missense probably damaging 0.96
R1866:Usp47 UTSW 7 111,701,077 (GRCm39) missense possibly damaging 0.93
R1876:Usp47 UTSW 7 111,654,127 (GRCm39) missense probably damaging 0.99
R1953:Usp47 UTSW 7 111,692,083 (GRCm39) missense probably benign 0.26
R2117:Usp47 UTSW 7 111,666,443 (GRCm39) critical splice donor site probably null
R2176:Usp47 UTSW 7 111,691,934 (GRCm39) missense probably benign 0.00
R2187:Usp47 UTSW 7 111,666,398 (GRCm39) missense probably damaging 1.00
R2504:Usp47 UTSW 7 111,703,677 (GRCm39) critical splice donor site probably null
R2902:Usp47 UTSW 7 111,692,658 (GRCm39) missense probably damaging 1.00
R2922:Usp47 UTSW 7 111,692,405 (GRCm39) missense probably damaging 1.00
R2939:Usp47 UTSW 7 111,681,743 (GRCm39) missense probably damaging 1.00
R4065:Usp47 UTSW 7 111,652,623 (GRCm39) missense probably benign 0.30
R4179:Usp47 UTSW 7 111,687,091 (GRCm39) missense probably damaging 1.00
R4235:Usp47 UTSW 7 111,709,255 (GRCm39) missense probably damaging 0.99
R4243:Usp47 UTSW 7 111,707,836 (GRCm39) missense probably damaging 1.00
R4281:Usp47 UTSW 7 111,709,200 (GRCm39) missense probably benign 0.03
R4360:Usp47 UTSW 7 111,654,139 (GRCm39) missense probably damaging 1.00
R4604:Usp47 UTSW 7 111,701,038 (GRCm39) missense probably damaging 1.00
R4857:Usp47 UTSW 7 111,681,759 (GRCm39) missense probably damaging 1.00
R5133:Usp47 UTSW 7 111,683,089 (GRCm39) missense probably damaging 1.00
R5179:Usp47 UTSW 7 111,692,639 (GRCm39) missense probably damaging 1.00
R5322:Usp47 UTSW 7 111,652,476 (GRCm39) missense probably damaging 0.99
R5445:Usp47 UTSW 7 111,673,928 (GRCm39) missense probably damaging 1.00
R5465:Usp47 UTSW 7 111,658,209 (GRCm39) missense probably damaging 1.00
R5699:Usp47 UTSW 7 111,709,204 (GRCm39) missense probably benign 0.00
R5961:Usp47 UTSW 7 111,652,523 (GRCm39) missense probably damaging 1.00
R6117:Usp47 UTSW 7 111,687,139 (GRCm39) missense probably damaging 0.98
R6271:Usp47 UTSW 7 111,686,263 (GRCm39) missense probably damaging 1.00
R7155:Usp47 UTSW 7 111,686,220 (GRCm39) missense probably damaging 0.97
R7229:Usp47 UTSW 7 111,692,084 (GRCm39) missense probably benign 0.04
R7285:Usp47 UTSW 7 111,692,315 (GRCm39) missense probably benign 0.02
R7938:Usp47 UTSW 7 111,687,132 (GRCm39) missense probably damaging 0.99
R8079:Usp47 UTSW 7 111,646,177 (GRCm39) missense probably damaging 1.00
R8114:Usp47 UTSW 7 111,692,394 (GRCm39) missense probably damaging 1.00
R8141:Usp47 UTSW 7 111,652,472 (GRCm39) missense possibly damaging 0.60
R8172:Usp47 UTSW 7 111,687,133 (GRCm39) nonsense probably null
R8223:Usp47 UTSW 7 111,703,583 (GRCm39) missense probably damaging 1.00
R8510:Usp47 UTSW 7 111,658,208 (GRCm39) missense probably damaging 1.00
R8701:Usp47 UTSW 7 111,692,402 (GRCm39) missense probably damaging 1.00
R9106:Usp47 UTSW 7 111,681,713 (GRCm39) missense probably damaging 1.00
R9135:Usp47 UTSW 7 111,652,431 (GRCm39) missense probably benign 0.30
R9311:Usp47 UTSW 7 111,703,257 (GRCm39) missense probably benign 0.02
R9417:Usp47 UTSW 7 111,688,801 (GRCm39) missense possibly damaging 0.86
R9487:Usp47 UTSW 7 111,677,063 (GRCm39) missense probably damaging 0.99
R9628:Usp47 UTSW 7 111,705,999 (GRCm39) missense probably benign 0.01
RF010:Usp47 UTSW 7 111,692,145 (GRCm39) missense probably damaging 0.99
X0027:Usp47 UTSW 7 111,687,054 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- AATGAATCAGCCTGCTGCCC -3'
(R):5'- CGCATCTGAAGATACCACAGTAAAG -3'

Sequencing Primer
(F):5'- TGCAGCGACCTCATTAATCTAG -3'
(R):5'- TCTGAAGATACCACAGTAAAGAGATG -3'
Posted On 2020-01-08