Mutagenetix > Incidental Mutation

Incidental Mutation 'R7471:Acaca'

615923

Institutional Source

Beutler Lab

Gene Symbol

Acaca

Ensembl Gene

ENSMUSG00000020532

Gene Name

acetyl-Coenzyme A carboxylase alpha

Synonyms

LOC327983, Acac, A530025K05Rik, acetyl-CoA carboxylase, Acc1

MMRRC Submission

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R7471 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

84129672-84401651 bp(+) (GRCm38)

Type of Mutation

splice site

DNA Base Change (assembly)

T to A at 84277782 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000099490 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000020843] [ENSMUST00000103201] [ENSMUST00000183887]

AlphaFold

Q5SWU9

Predicted Effect

probably null
Transcript: ENSMUST00000020843

SMART Domains

Protein: ENSMUSP00000020843
Gene: ENSMUSG00000020532

Domain	Start	End	E-Value	Type
Pfam:CPSase_L_chain	116	236	4.7e-33	PFAM
Pfam:CPSase_L_D2	272	472	2.5e-55	PFAM
Pfam:ATP-grasp	280	443	4.3e-7	PFAM
Pfam:ATP-grasp_4	282	442	1.9e-11	PFAM
Pfam:Dala_Dala_lig_C	284	440	5.4e-7	PFAM
Biotin_carb_C	506	613	3.76e-24	SMART
low complexity region	708	725	N/A	INTRINSIC
Pfam:Biotin_lipoyl	751	817	9.8e-19	PFAM
Pfam:ACC_central	818	1568	2.1e-288	PFAM
Pfam:Carboxyl_trans	1668	2222	1.6e-185	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000103201

SMART Domains

Protein: ENSMUSP00000099490
Gene: ENSMUSG00000020532

Domain	Start	End	E-Value	Type
Pfam:CPSase_L_chain	116	236	6.7e-29	PFAM
Pfam:ATP-grasp_4	239	442	2e-15	PFAM
Pfam:CPSase_L_D2	272	472	3.3e-55	PFAM
Pfam:Dala_Dala_lig_C	279	440	3e-7	PFAM
Pfam:ATP-grasp	281	442	1.1e-6	PFAM
Biotin_carb_C	506	613	3.76e-24	SMART
low complexity region	708	725	N/A	INTRINSIC
Pfam:Biotin_lipoyl	751	817	3.7e-18	PFAM
Pfam:ACC_central	818	1568	3.5e-253	PFAM
Pfam:Carboxyl_trans	1668	2222	2.7e-175	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000183887

SMART Domains

Protein: ENSMUSP00000139378
Gene: ENSMUSG00000020532

Domain	Start	End	E-Value	Type
Pfam:ACC_central	1	228	8.6e-57	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.7%

Validation Efficiency

100% (73/73)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Acetyl-CoA carboxylase (ACC) is a complex multifunctional enzyme system. ACC is a biotin-containing enzyme which catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, the rate-limiting step in fatty acid synthesis. There are two ACC forms, alpha and beta, encoded by two different genes. ACC-alpha is highly enriched in lipogenic tissues. The enzyme is under long term control at the transcriptional and translational levels and under short term regulation by the phosphorylation/dephosphorylation of targeted serine residues and by allosteric transformation by citrate or palmitoyl-CoA. Multiple alternatively spliced transcript variants divergent in the 5' sequence and encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous null mice display embryonic lethality before embryo turning with growth arrest at the egg cylinder stage. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9930021J03Rik	A	C	19: 29,729,739		probably null	Het
Ace	T	C	11: 105,973,482	V483A	probably damaging	Het
Akap13	G	A	7: 75,730,465	R462H	probably damaging	Het
Angptl2	A	T	2: 33,243,739	T358S	possibly damaging	Het
Apoh	C	T	11: 108,407,305	P144S	probably damaging	Het
Arid1a	A	G	4: 133,681,044	W1666R	unknown	Het
Asap3	A	G	4: 136,233,646	H223R	possibly damaging	Het
Bcl2l12	A	G	7: 44,996,553	S81P	possibly damaging	Het
C8a	A	G	4: 104,817,625	S550P	probably benign	Het
Cacna2d1	C	G	5: 15,934,975		probably benign	Het
Ccdc170	A	G	10: 4,520,803	T216A	probably benign	Het
Chd7	A	T	4: 8,859,197	K2429I	probably damaging	Het
Chd8	T	C	14: 52,204,112	N2181S	probably benign	Het
Clip3	T	C	7: 30,301,952	V342A	possibly damaging	Het
Cst10	C	T	2: 149,405,576	L71F	probably benign	Het
Cyp20a1	T	C	1: 60,354,640	F139S	probably damaging	Het
Dclre1b	T	A	3: 103,803,114	R494W	probably benign	Het
Dicer1	A	G	12: 104,694,710	I1695T	probably damaging	Het
Dnah7a	A	G	1: 53,419,699	L3760P	probably damaging	Het
Dock1	A	G	7: 135,163,343	D1688G	possibly damaging	Het
Drosha	G	A	15: 12,889,656	R870Q	probably damaging	Het
Dsg2	G	T	18: 20,580,618	M215I	probably benign	Het
Dst	A	T	1: 34,194,570	D3453V	possibly damaging	Het
Epha10	A	T	4: 124,902,572	Y358F		Het
Ermp1	A	T	19: 29,612,654	M853K	probably benign	Het
Hace1	T	G	10: 45,700,979	I823S	probably benign	Het
Hectd3	A	T	4: 116,996,588	Y227F	probably benign	Het
Hells	A	G	19: 38,957,057	N580S	probably benign	Het
Igkv12-44	A	G	6: 69,814,734	F82L	probably damaging	Het
Inpp5d	A	G	1: 87,695,400	D405G	probably damaging	Het
Itsn2	G	A	12: 4,708,198	R1508H	probably benign	Het
Limk1	A	T	5: 134,657,971		probably null	Het
Lingo1	T	A	9: 56,620,883	K147*	probably null	Het
Ltn1	T	C	16: 87,397,899	S1371G	probably benign	Het
Mab21l1	A	G	3: 55,783,886	D298G	possibly damaging	Het
Macf1	A	T	4: 123,472,289	V2893E	probably benign	Het
Mapk8ip1	T	C	2: 92,389,144	D114G	probably benign	Het
Med15	A	T	16: 17,722,865	W6R	probably benign	Het
Mrps34	T	C	17: 24,895,457	L97P	probably damaging	Het
Myrfl	A	T	10: 116,861,512	F36I	possibly damaging	Het
Nifk	G	A	1: 118,332,474	S253N	probably damaging	Het
Nmnat1	T	A	4: 149,473,301	T95S	probably damaging	Het
Oasl1	T	A	5: 114,935,926	I298N	probably damaging	Het
Odf3l1	C	T	9: 56,852,499		probably null	Het
Olfr570	A	G	7: 102,900,553	Y62C	probably benign	Het
Olfr689	T	G	7: 105,314,505	L167R	probably damaging	Het
Olfr970	A	T	9: 39,820,127	M163L	probably benign	Het
Polr2b	C	T	5: 77,321,066	R230*	probably null	Het
Prkra	T	A	2: 76,647,201	E53D	probably benign	Het
Rasgrp4	T	A	7: 29,145,980	L376Q	probably damaging	Het
Rwdd3	A	G	3: 121,171,312	S65P	probably benign	Het
Satb1	G	A	17: 51,783,001	P273S	probably damaging	Het
Scg3	T	C	9: 75,682,092	E93G	probably damaging	Het
Sf3a1	T	C	11: 4,167,724	F162S	possibly damaging	Het
Sorcs1	A	G	19: 50,262,263	Y377H	probably damaging	Het
Sptbn4	G	A	7: 27,409,014	A661V	possibly damaging	Het
Stk36	A	G	1: 74,634,320	N996S	unknown	Het
Tbca	A	T	13: 94,832,415	I37F	probably damaging	Het
Tc2n	A	T	12: 101,706,457	V75E	probably damaging	Het
Tdrkh	A	T	3: 94,425,956	S243C	probably damaging	Het
Tjp1	T	C	7: 65,314,690	D911G	probably damaging	Het
Tmbim6	A	G	15: 99,401,443		probably benign	Het
Tob1	T	A	11: 94,213,882	D81E	probably benign	Het
Ttpal	T	A	2: 163,607,025		probably null	Het
Usp37	A	T	1: 74,495,628		probably null	Het
Vmn1r235	A	G	17: 21,262,396	I328V	probably benign	Het
Vmn1r28	T	A	6: 58,265,865	L231*	probably null	Het
Xirp1	G	A	9: 120,019,110	Q236*	probably null	Het
Zc3h7b	A	G	15: 81,780,481	T514A	probably damaging	Het
Zfp524	A	G	7: 5,018,201	I243V	probably benign	Het
Zfp655	T	A	5: 145,244,732	Y467N	possibly damaging	Het
Zfp985	A	T	4: 147,582,931	K85N	possibly damaging	Het

Other mutations in Acaca

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00544:Acaca	APN	11	84278917	missense	probably damaging	1.00
IGL01134:Acaca	APN	11	84251279	missense	probably benign	0.22
IGL01446:Acaca	APN	11	84260631	missense	probably damaging	1.00
IGL01591:Acaca	APN	11	84243320	missense	probably damaging	1.00
IGL01663:Acaca	APN	11	84277802	missense	possibly damaging	0.85
IGL01767:Acaca	APN	11	84320542	missense	probably benign	0.01
IGL02206:Acaca	APN	11	84260747	nonsense	probably null
IGL02335:Acaca	APN	11	84214258	missense	possibly damaging	0.84
IGL02477:Acaca	APN	11	84307168	splice site	probably benign
IGL02515:Acaca	APN	11	84262403	missense	probably benign
IGL02651:Acaca	APN	11	84245204	splice site	probably benign
IGL02805:Acaca	APN	11	84223133	splice site	probably benign
IGL03328:Acaca	APN	11	84320529	missense	probably benign	0.00
effervescence	UTSW	11	84262474	missense	probably benign	0.41
fizz	UTSW	11	84245856	missense	probably damaging	0.98
greenhouse	UTSW	11	84338356	missense	probably damaging	1.00
Serene	UTSW	11	84311409	splice site	probably null
Tranquil	UTSW	11	84280461	missense	probably damaging	1.00
vitamin	UTSW	11	84280435	missense	possibly damaging	0.78
ANU05:Acaca	UTSW	11	84315852	missense	probably damaging	1.00
R0385:Acaca	UTSW	11	84231748	missense	probably benign	0.01
R0518:Acaca	UTSW	11	84290286	critical splice acceptor site	probably null
R0536:Acaca	UTSW	11	84280516	splice site	probably benign
R0962:Acaca	UTSW	11	84311303	missense	probably damaging	1.00
R0968:Acaca	UTSW	11	84239033	nonsense	probably null
R1123:Acaca	UTSW	11	84264080	missense	probably benign	0.09
R1452:Acaca	UTSW	11	84295059	splice site	probably benign
R1478:Acaca	UTSW	11	84372627	missense	probably damaging	1.00
R1500:Acaca	UTSW	11	84293984	missense	probably benign	0.00
R1512:Acaca	UTSW	11	84195469	missense	probably benign	0.00
R1657:Acaca	UTSW	11	84264084	missense	probably benign	0.09
R1681:Acaca	UTSW	11	84226185	missense	probably damaging	1.00
R1682:Acaca	UTSW	11	84392217	missense	probably benign	0.23
R1688:Acaca	UTSW	11	84238896	missense	probably damaging	1.00
R1755:Acaca	UTSW	11	84276564	frame shift	probably null
R1775:Acaca	UTSW	11	84300422	missense	possibly damaging	0.56
R1793:Acaca	UTSW	11	84315969	missense	probably damaging	0.98
R1793:Acaca	UTSW	11	84338393	missense	probably damaging	1.00
R1855:Acaca	UTSW	11	84371554	missense	probably damaging	0.96
R1881:Acaca	UTSW	11	84270387	nonsense	probably null
R1881:Acaca	UTSW	11	84300471	splice site	probably benign
R1989:Acaca	UTSW	11	84262529	missense	probably damaging	0.98
R2147:Acaca	UTSW	11	84276536	missense	probably benign	0.03
R2215:Acaca	UTSW	11	84363793	missense	probably damaging	1.00
R2238:Acaca	UTSW	11	84391505	splice site	probably benign
R2252:Acaca	UTSW	11	84371532	missense	probably damaging	0.99
R2316:Acaca	UTSW	11	84264080	missense	probably benign	0.16
R2316:Acaca	UTSW	11	84294983	missense	possibly damaging	0.69
R2337:Acaca	UTSW	11	84257197	missense	possibly damaging	0.93
R2697:Acaca	UTSW	11	84364413	missense	probably damaging	1.00
R3551:Acaca	UTSW	11	84261624	missense	probably damaging	1.00
R3552:Acaca	UTSW	11	84261624	missense	probably damaging	1.00
R3748:Acaca	UTSW	11	84311409	splice site	probably null
R3844:Acaca	UTSW	11	84364413	missense	probably damaging	1.00
R3873:Acaca	UTSW	11	84312721	unclassified	probably benign
R4152:Acaca	UTSW	11	84292926	missense	possibly damaging	0.88
R4406:Acaca	UTSW	11	84280449	missense	probably benign	0.35
R4448:Acaca	UTSW	11	84262492	missense	probably damaging	1.00
R4642:Acaca	UTSW	11	84280461	missense	probably damaging	1.00
R4696:Acaca	UTSW	11	84280435	missense	possibly damaging	0.78
R4707:Acaca	UTSW	11	84312854	missense	probably damaging	0.96
R4710:Acaca	UTSW	11	84392337	missense	possibly damaging	0.84
R4775:Acaca	UTSW	11	84243339	missense	probably damaging	1.00
R4821:Acaca	UTSW	11	84294987	missense	possibly damaging	0.69
R4883:Acaca	UTSW	11	84251290	missense	probably benign	0.01
R4988:Acaca	UTSW	11	84263295	missense	probably damaging	1.00
R5034:Acaca	UTSW	11	84245264	missense	probably benign	0.00
R5255:Acaca	UTSW	11	84311307	missense	probably damaging	1.00
R5294:Acaca	UTSW	11	84391519	missense	probably benign	0.01
R5350:Acaca	UTSW	11	84215873	missense	probably damaging	0.99
R5437:Acaca	UTSW	11	84346820	splice site	probably null
R5664:Acaca	UTSW	11	84243384	missense	probably damaging	1.00
R5665:Acaca	UTSW	11	84245294	nonsense	probably null
R5959:Acaca	UTSW	11	84215966	missense	probably damaging	1.00
R6011:Acaca	UTSW	11	84245744	missense	probably benign	0.44
R6027:Acaca	UTSW	11	84398177	missense	probably benign
R6246:Acaca	UTSW	11	84315970	missense	probably benign	0.08
R6313:Acaca	UTSW	11	84292929	missense	probably benign	0.00
R6450:Acaca	UTSW	11	84280468	missense	probably damaging	0.98
R6623:Acaca	UTSW	11	84371499	critical splice acceptor site	probably null
R6736:Acaca	UTSW	11	84238838	missense	probably benign	0.05
R6752:Acaca	UTSW	11	84195483	missense	probably benign	0.44
R6807:Acaca	UTSW	11	84391530	missense	probably benign
R6826:Acaca	UTSW	11	84195536	missense	probably damaging	1.00
R7035:Acaca	UTSW	11	84238943	missense	probably damaging	1.00
R7078:Acaca	UTSW	11	84263312	missense	possibly damaging	0.91
R7088:Acaca	UTSW	11	84278957	critical splice donor site	probably null
R7201:Acaca	UTSW	11	84262474	missense	probably benign	0.41
R7261:Acaca	UTSW	11	84368700	missense	probably damaging	1.00
R7399:Acaca	UTSW	11	84260679	missense	possibly damaging	0.89
R7421:Acaca	UTSW	11	84363736	missense	possibly damaging	0.64
R7443:Acaca	UTSW	11	84315793	missense	probably benign	0.02
R7453:Acaca	UTSW	11	84245310	missense	probably benign
R7519:Acaca	UTSW	11	84245856	missense	probably damaging	0.98
R7537:Acaca	UTSW	11	84260634	missense	probably damaging	1.00
R7574:Acaca	UTSW	11	84261588	missense	probably benign
R7633:Acaca	UTSW	11	84372639	missense	probably benign	0.26
R7643:Acaca	UTSW	11	84338356	missense	probably damaging	1.00
R7664:Acaca	UTSW	11	84245349	missense	probably damaging	1.00
R7675:Acaca	UTSW	11	84315916	missense	probably benign	0.04
R7676:Acaca	UTSW	11	84294987	missense	possibly damaging	0.69
R7729:Acaca	UTSW	11	84371513	missense	probably damaging	0.98
R7867:Acaca	UTSW	11	84249524	missense	possibly damaging	0.88
R7898:Acaca	UTSW	11	84364449	critical splice donor site	probably null
R7909:Acaca	UTSW	11	84245235	missense	possibly damaging	0.56
R7915:Acaca	UTSW	11	84276588	missense	probably benign
R7956:Acaca	UTSW	11	84320580	missense	probably damaging	0.98
R8000:Acaca	UTSW	11	84392231	missense	possibly damaging	0.88
R8038:Acaca	UTSW	11	84215904	missense	probably damaging	1.00
R8545:Acaca	UTSW	11	84345968	missense	probably damaging	1.00
R8722:Acaca	UTSW	11	84338457	missense	possibly damaging	0.85
R9005:Acaca	UTSW	11	84371584	missense	probably damaging	0.99
R9130:Acaca	UTSW	11	84311319	missense	probably damaging	1.00
R9397:Acaca	UTSW	11	84368725	missense	probably damaging	1.00
R9489:Acaca	UTSW	11	84293016	missense	probably benign	0.01
R9540:Acaca	UTSW	11	84243411	missense	probably damaging	1.00
R9593:Acaca	UTSW	11	84380513	nonsense	probably null
R9605:Acaca	UTSW	11	84293016	missense	probably benign	0.01
R9634:Acaca	UTSW	11	84293990	missense	probably benign	0.00
R9720:Acaca	UTSW	11	84263357	missense	probably damaging	1.00
RF014:Acaca	UTSW	11	84231724	missense	probably benign	0.01
X0027:Acaca	UTSW	11	84292895	missense	probably benign	0.01
X0060:Acaca	UTSW	11	84264104	missense	probably benign
X0067:Acaca	UTSW	11	84368737	nonsense	probably null
Z1176:Acaca	UTSW	11	84260720	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CTGAGACTCAGTACACGGTG -3'
(R):5'- AGGCTAAGCTATGATCCTGCAAC -3'

Sequencing Primer
(F):5'- GGCCCTGACTTTATGCTATAGGAC -3'
(R):5'- GGTTATGGCGAAGCTCAT -3'

Posted On

2020-01-13