Mutagenetix > Incidental Mutation

Incidental Mutation 'R8008:Or5k15'

616765

Institutional Source

Beutler Lab

Gene Symbol

Or5k15

Ensembl Gene

ENSMUSG00000044029

Gene Name

olfactory receptor family 5 subfamily J member 15

Synonyms

MOR184-6, Olfr178, GA_x54KRFPKG5P-55108059-55107100

MMRRC Submission

046048-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.069) question?

Stock #

R8008 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

58709622-58710581 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 58710251 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 111 (T111A)

Ref Sequence

ENSEMBL: ENSMUSP00000145885 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000058564] [ENSMUST00000206523] [ENSMUST00000215032]

AlphaFold

E9Q9T3

Predicted Effect

probably benign
Transcript: ENSMUST00000058564
AA Change: T111A

PolyPhen 2 Score 0.126 (Sensitivity: 0.93; Specificity: 0.86)

SMART Domains

Protein: ENSMUSP00000049578
Gene: ENSMUSG00000044029
AA Change: T111A

Domain	Start	End	E-Value	Type
Pfam:7tm_4	33	306	1.2e-49	PFAM
Pfam:7TM_GPCR_Srsx	37	262	4.4e-7	PFAM
Pfam:7tm_1	43	312	5.2e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000206523
AA Change: T111A

PolyPhen 2 Score 0.126 (Sensitivity: 0.93; Specificity: 0.86)

Predicted Effect

probably benign
Transcript: ENSMUST00000215032
AA Change: T111A

PolyPhen 2 Score 0.126 (Sensitivity: 0.93; Specificity: 0.86)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210408I21Rik	A	T	13: 77,429,234 (GRCm39)	I774F	probably benign	Het
Alpi	A	G	1: 87,026,384 (GRCm39)	S536P	unknown	Het
Ankar	A	G	1: 72,705,643 (GRCm39)	V789A	possibly damaging	Het
Atp5f1b	C	A	10: 127,919,277 (GRCm39)	Q28K	unknown	Het
Brpf1	T	C	6: 113,296,050 (GRCm39)	V781A	probably benign	Het
Cd177	G	A	7: 24,451,774 (GRCm39)	S414L	not run	Het
Cimip3	T	A	17: 47,747,661 (GRCm39)	E28V	probably damaging	Het
Clca3b	T	A	3: 144,550,370 (GRCm39)	T192S	probably benign	Het
Coro2a	A	T	4: 46,551,349 (GRCm39)	S119T	probably damaging	Het
Cpped1	T	C	16: 11,646,260 (GRCm39)	N164S	probably damaging	Het
Crybg2	T	A	4: 133,818,415 (GRCm39)	N1390K	probably damaging	Het
Epn2	C	T	11: 61,437,492 (GRCm39)	A27T	probably damaging	Het
Esp34	T	C	17: 38,870,490 (GRCm39)	F128S	possibly damaging	Het
Evpl	T	A	11: 116,121,298 (GRCm39)	N410Y	probably null	Het
Flnb	A	G	14: 7,892,155 (GRCm38)	Y608C	probably damaging	Het
Fpr3	T	C	17: 18,191,715 (GRCm39)	S329P	probably benign	Het
Frem2	T	A	3: 53,560,331 (GRCm39)	N1392I	probably damaging	Het
Garin2	T	A	12: 78,761,817 (GRCm39)	D160E	probably benign	Het
Gpi1	G	T	7: 33,917,726 (GRCm39)	N249K	probably damaging	Het
Gpr87	T	C	3: 59,087,466 (GRCm39)	N13S	probably benign	Het
Gys2	T	C	6: 142,400,243 (GRCm39)	T323A	probably damaging	Het
Iqgap3	T	C	3: 88,016,770 (GRCm39)	I1084T	probably damaging	Het
Lrfn4	C	G	19: 4,663,565 (GRCm39)	G323A	probably benign	Het
Lrrc4c	A	T	2: 97,460,594 (GRCm39)	S407C	possibly damaging	Het
Map3k20	A	T	2: 72,268,613 (GRCm39)	Q540L	probably benign	Het
Myom1	T	C	17: 71,407,057 (GRCm39)	V1158A	probably benign	Het
Ncor2	T	C	5: 125,144,983 (GRCm39)	D378G	unknown	Het
Nhsl1	T	A	10: 18,284,186 (GRCm39)	D42E	probably damaging	Het
Nr0b2	C	A	4: 133,283,339 (GRCm39)	A192E	probably benign	Het
Nt5c1b	A	G	12: 10,425,000 (GRCm39)	D182G	possibly damaging	Het
Or12d14-ps1	T	C	17: 37,673,265 (GRCm39)	S86P	probably damaging	Het
Or4c115	A	T	2: 88,928,059 (GRCm39)	C71S	probably benign	Het
Or5b119	T	C	19: 13,457,170 (GRCm39)	T131A	probably benign	Het
Or8b12	A	T	9: 37,658,089 (GRCm39)	I220F	probably damaging	Het
Pepd	A	G	7: 34,721,126 (GRCm39)	N250S	probably benign	Het
Plscr4	C	T	9: 92,372,843 (GRCm39)	R322*	probably null	Het
Pmp22	C	T	11: 63,049,233 (GRCm39)	R159C	probably damaging	Het
Pou3f1	C	T	4: 124,552,764 (GRCm39)	A422V	unknown	Het
Rab11fip3	A	G	17: 26,286,956 (GRCm39)	L399P	probably damaging	Het
Rragc	A	G	4: 123,829,340 (GRCm39)	D352G	probably damaging	Het
Ryr2	A	G	13: 11,671,980 (GRCm39)	V3420A	probably benign	Het
Sez6	T	A	11: 77,864,082 (GRCm39)	Y521*	probably null	Het
Smc4	T	C	3: 68,914,645 (GRCm39)	V86A	probably damaging	Het
Stap2	T	A	17: 56,304,790 (GRCm39)	M331L	probably benign	Het
Syt8	G	A	7: 141,992,259 (GRCm39)	R89H	probably benign	Het
Tcof1	G	C	18: 60,962,123 (GRCm39)	A702G	possibly damaging	Het
Trim21	G	T	7: 102,209,183 (GRCm39)	T280K	probably benign	Het
Trim36	C	A	18: 46,305,556 (GRCm39)	V476F	probably benign	Het
Troap	G	T	15: 98,973,511 (GRCm39)	R56L	probably benign	Het
Ttn	A	T	2: 76,667,130 (GRCm39)	I11492K	unknown	Het
Tuft1	T	C	3: 94,521,440 (GRCm39)	T390A	probably damaging	Het
Ucp1	T	C	8: 84,020,640 (GRCm39)	I150T	probably benign	Het
Usp17lb	A	T	7: 104,490,481 (GRCm39)	C149S	possibly damaging	Het
Vmn1r159	A	T	7: 22,542,665 (GRCm39)	N122K	possibly damaging	Het
Vmn1r237	T	C	17: 21,534,456 (GRCm39)	C60R	probably damaging	Het
Wdr12	A	T	1: 60,128,494 (GRCm39)	Y85*	probably null	Het
Wdr3	T	C	3: 100,062,252 (GRCm39)	D221G	probably benign	Het
Wdr97	G	A	15: 76,244,832 (GRCm39)	E1125K		Het
Zan	T	C	5: 137,403,624 (GRCm39)	E3974G	unknown	Het

Other mutations in Or5k15

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00953:Or5k15	APN	16	58,710,048 (GRCm39)	missense	probably damaging	0.97
IGL01964:Or5k15	APN	16	58,709,827 (GRCm39)	missense	probably damaging	0.97
IGL02122:Or5k15	APN	16	58,710,134 (GRCm39)	missense	probably benign
IGL02183:Or5k15	APN	16	58,710,184 (GRCm39)	missense	probably benign	0.00
IGL03143:Or5k15	APN	16	58,709,824 (GRCm39)	missense	probably damaging	1.00
R1566:Or5k15	UTSW	16	58,709,903 (GRCm39)	missense	probably damaging	1.00
R2324:Or5k15	UTSW	16	58,710,503 (GRCm39)	missense	probably benign
R2420:Or5k15	UTSW	16	58,710,328 (GRCm39)	missense	probably benign	0.00
R2421:Or5k15	UTSW	16	58,710,328 (GRCm39)	missense	probably benign	0.00
R2422:Or5k15	UTSW	16	58,710,328 (GRCm39)	missense	probably benign	0.00
R4256:Or5k15	UTSW	16	58,710,143 (GRCm39)	missense	probably benign	0.21
R4374:Or5k15	UTSW	16	58,710,242 (GRCm39)	missense	probably benign	0.13
R4502:Or5k15	UTSW	16	58,710,539 (GRCm39)	missense	probably benign	0.02
R4503:Or5k15	UTSW	16	58,710,539 (GRCm39)	missense	probably benign	0.02
R4662:Or5k15	UTSW	16	58,710,287 (GRCm39)	missense	probably damaging	1.00
R4967:Or5k15	UTSW	16	58,709,957 (GRCm39)	missense	possibly damaging	0.48
R5206:Or5k15	UTSW	16	58,710,381 (GRCm39)	missense	probably damaging	0.99
R5285:Or5k15	UTSW	16	58,710,471 (GRCm39)	nonsense	probably null
R5477:Or5k15	UTSW	16	58,710,107 (GRCm39)	missense	probably benign	0.10
R5554:Or5k15	UTSW	16	58,710,169 (GRCm39)	missense	possibly damaging	0.95
R5723:Or5k15	UTSW	16	58,709,976 (GRCm39)	nonsense	probably null
R5725:Or5k15	UTSW	16	58,710,250 (GRCm39)	missense	possibly damaging	0.64
R6853:Or5k15	UTSW	16	58,710,122 (GRCm39)	missense	probably damaging	0.99
R6853:Or5k15	UTSW	16	58,710,121 (GRCm39)	missense	possibly damaging	0.64
R7238:Or5k15	UTSW	16	58,710,252 (GRCm39)	missense	probably damaging	1.00
R7554:Or5k15	UTSW	16	58,709,769 (GRCm39)	missense	probably benign	0.27
R7577:Or5k15	UTSW	16	58,709,629 (GRCm39)	missense	probably benign	0.22
R7787:Or5k15	UTSW	16	58,709,953 (GRCm39)	missense	probably benign
R8140:Or5k15	UTSW	16	58,709,948 (GRCm39)	missense	probably benign	0.10
R8928:Or5k15	UTSW	16	58,709,750 (GRCm39)	missense	possibly damaging	0.75
R9082:Or5k15	UTSW	16	58,709,834 (GRCm39)	missense	probably damaging	1.00
R9285:Or5k15	UTSW	16	58,710,569 (GRCm39)	nonsense	probably null
R9414:Or5k15	UTSW	16	58,710,565 (GRCm39)	missense	probably benign	0.03
R9627:Or5k15	UTSW	16	58,709,771 (GRCm39)	missense	probably benign	0.01
R9745:Or5k15	UTSW	16	58,710,265 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GTCTGTACAGGAGAGTCTATACAGG -3'
(R):5'- ATGGAGCCTCGTCTCCATAC -3'

Sequencing Primer
(F):5'- TATCACAGAAGAAATGATCAATGCG -3'
(R):5'- ATACACCCATGTACATCTTTCTGGG -3'

Posted On

2020-01-23