Incidental Mutation 'R8015:Pate2'
ID617135
Institutional Source Beutler Lab
Gene Symbol Pate2
Ensembl Gene ENSMUSG00000074452
Gene Nameprostate and testis expressed 2
SynonymsmANLP1, LOC330921
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R8015 (G1)
Quality Score225.009
Status Not validated
Chromosome9
Chromosomal Location35570284-35690318 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to T at 35670518 bp
ZygosityHeterozygous
Amino Acid Change Histidine to Leucine at position 36 (H36L)
Ref Sequence ENSEMBL: ENSMUSP00000113239 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000098906] [ENSMUST00000118254]
Predicted Effect possibly damaging
Transcript: ENSMUST00000098906
AA Change: H36L

PolyPhen 2 Score 0.915 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000096505
Gene: ENSMUSG00000074452
AA Change: H36L

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000118254
AA Change: H36L

PolyPhen 2 Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000113239
Gene: ENSMUSG00000074452
AA Change: H36L

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Alad A G 4: 62,511,922 V121A probably damaging Het
Anapc2 T A 2: 25,284,676 Y684N probably benign Het
Arntl2 T C 6: 146,820,590 S220P probably damaging Het
Atp10a G T 7: 58,803,497 R808L probably benign Het
Best2 A G 8: 85,009,354 V317A probably damaging Het
Cacnb4 A G 2: 52,464,643 L241P probably damaging Het
Col6a5 T C 9: 105,881,741 T2089A possibly damaging Het
Cttnbp2 G C 6: 18,426,093 A762G possibly damaging Het
Defb13 G T 8: 21,946,812 V8F possibly damaging Het
Fam126b A G 1: 58,535,482 V300A possibly damaging Het
Fat4 A G 3: 38,981,916 D3239G possibly damaging Het
Gm16486 C T 8: 70,716,792 S1177L probably benign Het
Gm5615 A G 9: 36,534,954 V54A probably benign Het
Hmcn1 T G 1: 150,598,311 R4793S possibly damaging Het
Hspa1a T A 17: 34,970,649 Q426L probably damaging Het
Il20rb T A 9: 100,474,894 Y61F probably damaging Het
Itgb1 T A 8: 128,722,401 V496D possibly damaging Het
Jakmip1 T C 5: 37,159,765 S102P unknown Het
Jmjd8 T A 17: 25,829,328 F108I probably damaging Het
Krtap15 A G 16: 88,829,209 T55A possibly damaging Het
Lnpep C A 17: 17,546,499 V702F probably damaging Het
Lox G A 18: 52,528,348 A218V probably benign Het
Mcrs1 T A 15: 99,248,854 K99* probably null Het
Mfsd8 G A 3: 40,846,835 probably benign Het
Msto1 G T 3: 88,911,556 P264Q probably damaging Het
Nrp2 C T 1: 62,745,408 R239C probably damaging Het
Olfr1002 G T 2: 85,647,792 H176Q probably damaging Het
Olfr1368 T C 13: 21,142,133 D308G probably benign Het
Phf20l1 T G 15: 66,639,948 N925K possibly damaging Het
Pnliprp2 G T 19: 58,766,282 V253F probably damaging Het
Polr2b A G 5: 77,336,506 D745G probably damaging Het
Ptdss1 T A 13: 66,963,343 W158R possibly damaging Het
Rcn3 T A 7: 45,084,907 I226F probably damaging Het
Rhbdl1 C G 17: 25,835,851 V157L probably damaging Het
Slc30a2 A G 4: 134,347,450 T173A probably benign Het
Spata16 A G 3: 26,667,659 T110A probably benign Het
Specc1l A G 10: 75,241,068 K53E probably benign Het
Spta1 T A 1: 174,240,171 C2055S probably damaging Het
Tex14 G A 11: 87,509,600 R406Q probably benign Het
Tmem150b C T 7: 4,716,328 G198S probably null Het
Tnfrsf14 T G 4: 154,926,661 Q81P probably damaging Het
Txndc17 A G 11: 72,207,742 K40R probably benign Het
Ube3a T A 7: 59,284,756 V560E probably damaging Het
Vmn1r14 A G 6: 57,234,030 M198V probably damaging Het
Vmn2r23 G A 6: 123,704,541 S136N probably benign Het
Vmn2r31 C T 7: 7,384,200 V791I probably damaging Het
Wdfy4 T C 14: 33,107,747 Y984C Het
Zfp386 T G 12: 116,059,407 D248E probably damaging Het
Other mutations in Pate2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01475:Pate2 APN 9 35669702 start codon destroyed probably null
IGL01729:Pate2 APN 9 35670592 missense probably damaging 1.00
IGL03055:Pate2 APN 9 35611773 splice site probably benign
foie_gras UTSW 9 35670501 nonsense probably null
PIT4576001:Pate2 UTSW 9 35670593 missense probably damaging 1.00
R1229:Pate2 UTSW 9 35669695 missense probably damaging 0.98
R1397:Pate2 UTSW 9 35669695 missense probably damaging 0.98
R2393:Pate2 UTSW 9 35669740 splice site probably benign
R2426:Pate2 UTSW 9 35670480 critical splice acceptor site probably null
R3407:Pate2 UTSW 9 35670966 missense probably damaging 0.99
R4323:Pate2 UTSW 9 35670471 splice site probably benign
R4574:Pate2 UTSW 9 35685673 intron probably benign
R4716:Pate2 UTSW 9 35685682 intron probably benign
R5023:Pate2 UTSW 9 35686111 intron probably benign
R5057:Pate2 UTSW 9 35686111 intron probably benign
R5384:Pate2 UTSW 9 35670541 missense probably damaging 0.98
R5574:Pate2 UTSW 9 35686115 intron probably benign
R5593:Pate2 UTSW 9 35670482 missense possibly damaging 0.76
R5851:Pate2 UTSW 9 35670501 nonsense probably null
R6510:Pate2 UTSW 9 35669722 missense probably null 0.99
R6800:Pate2 UTSW 9 35685645 intron probably benign
R6819:Pate2 UTSW 9 35670505 missense probably damaging 1.00
R7531:Pate2 UTSW 9 35670712 intron probably null
R7765:Pate2 UTSW 9 35669901 missense probably benign 0.15
R7842:Pate2 UTSW 9 35670533 missense probably damaging 1.00
R7925:Pate2 UTSW 9 35670533 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TCGGACCTCCTTAAATGGTATAC -3'
(R):5'- TCATCCTAAGCATGAAAGGACC -3'

Sequencing Primer
(F):5'- TTAAGTTCTAGCCCAGCCAGG -3'
(R):5'- GCATGAAAGGACCTGCTATTTAG -3'
Posted On2020-01-23