Incidental Mutation 'R8016:Zfp628'
| ID |
617178 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Zfp628
|
| Ensembl Gene |
ENSMUSG00000074406 |
| Gene Name |
zinc finger protein 628 |
| Synonyms |
Zec |
| MMRRC Submission |
067456-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly essential
(E-score: 0.656)
|
| Stock # |
R8016 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
7 |
| Chromosomal Location |
4918216-4925001 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 4922228 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glycine
at position 150
(D150G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000112058
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000047309]
[ENSMUST00000116354]
[ENSMUST00000207506]
[ENSMUST00000207527]
[ENSMUST00000207687]
[ENSMUST00000208754]
|
| AlphaFold |
Q8CJ78 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000047309
|
| SMART Domains |
Protein: ENSMUSP00000045354
Gene: ENSMUSG00000035285
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
35 |
51 |
N/A |
INTRINSIC |
|
transmembrane domain
|
55 |
77 |
N/A |
INTRINSIC |
|
low complexity region
|
88 |
97 |
N/A |
INTRINSIC |
|
Pfam:Acetyltransf_1
|
101 |
186 |
4.1e-7 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000116354
AA Change: D150G
PolyPhen 2
Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000112058
Gene: ENSMUSG00000074406
AA Change: D150G
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
13 |
32 |
N/A |
INTRINSIC |
|
ZnF_C2H2
|
34 |
56 |
1.04e-3 |
SMART |
|
ZnF_C2H2
|
62 |
84 |
2.4e-3 |
SMART |
|
ZnF_C2H2
|
90 |
112 |
2.09e-3 |
SMART |
|
ZnF_C2H2
|
118 |
140 |
1.56e-2 |
SMART |
|
ZnF_C2H2
|
146 |
168 |
3.69e-4 |
SMART |
|
ZnF_C2H2
|
174 |
196 |
7.49e-5 |
SMART |
|
ZnF_C2H2
|
202 |
224 |
1.69e-3 |
SMART |
|
low complexity region
|
225 |
238 |
N/A |
INTRINSIC |
|
low complexity region
|
255 |
275 |
N/A |
INTRINSIC |
|
ZnF_C2H2
|
289 |
309 |
1.38e2 |
SMART |
|
low complexity region
|
334 |
344 |
N/A |
INTRINSIC |
|
ZnF_C2H2
|
346 |
368 |
1.76e-1 |
SMART |
|
ZnF_C2H2
|
376 |
398 |
9.3e-1 |
SMART |
|
low complexity region
|
422 |
440 |
N/A |
INTRINSIC |
|
ZnF_C2H2
|
446 |
468 |
2.75e-3 |
SMART |
|
ZnF_C2H2
|
474 |
496 |
1.69e-3 |
SMART |
|
ZnF_C2H2
|
502 |
524 |
1.45e-2 |
SMART |
|
ZnF_C2H2
|
530 |
552 |
1.03e-2 |
SMART |
|
ZnF_C2H2
|
558 |
580 |
3.44e-4 |
SMART |
|
ZnF_C2H2
|
586 |
608 |
2.61e-4 |
SMART |
|
ZnF_C2H2
|
614 |
636 |
7.9e-4 |
SMART |
|
low complexity region
|
685 |
703 |
N/A |
INTRINSIC |
|
low complexity region
|
716 |
756 |
N/A |
INTRINSIC |
|
low complexity region
|
770 |
792 |
N/A |
INTRINSIC |
|
low complexity region
|
981 |
1000 |
N/A |
INTRINSIC |
|
low complexity region
|
1001 |
1018 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000207506
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000207527
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000207687
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000208754
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.3%
|
| Validation Efficiency |
98% (41/42) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Zinc finger proteins (ZNFs), which bind nucleic acids, perform many key functions, the most important of which is regulating transcription. See ZNF91 (MIM 603971) for general information on ZNFs.[supplied by OMIM, Mar 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca3 |
T |
A |
17: 24,583,926 (GRCm39) |
M105K |
probably benign |
Het |
| Acer2 |
T |
C |
4: 86,804,443 (GRCm39) |
F53L |
probably damaging |
Het |
| Adam15 |
A |
G |
3: 89,252,668 (GRCm39) |
V307A |
probably benign |
Het |
| Afmid |
A |
G |
11: 117,726,370 (GRCm39) |
I193V |
probably benign |
Het |
| Ahdc1 |
C |
T |
4: 132,790,226 (GRCm39) |
T489M |
possibly damaging |
Het |
| Akap13 |
G |
A |
7: 75,380,213 (GRCm39) |
R462H |
probably damaging |
Het |
| Bag6 |
T |
A |
17: 35,357,733 (GRCm39) |
V133D |
unknown |
Het |
| Btla |
T |
C |
16: 45,070,950 (GRCm39) |
V304A |
probably damaging |
Het |
| Cacna1g |
A |
T |
11: 94,334,007 (GRCm39) |
I878N |
probably benign |
Het |
| Ccnf |
A |
T |
17: 24,450,784 (GRCm39) |
I398N |
possibly damaging |
Het |
| Clcnka |
A |
T |
4: 141,117,463 (GRCm39) |
S445T |
possibly damaging |
Het |
| Col6a6 |
A |
G |
9: 105,644,727 (GRCm39) |
V1187A |
possibly damaging |
Het |
| Col7a1 |
T |
C |
9: 108,787,712 (GRCm39) |
V664A |
unknown |
Het |
| Crb2 |
C |
A |
2: 37,676,568 (GRCm39) |
A183E |
possibly damaging |
Het |
| Cyp2j5 |
C |
T |
4: 96,546,951 (GRCm39) |
V188I |
probably damaging |
Het |
| D430041D05Rik |
A |
T |
2: 104,022,864 (GRCm39) |
N1043K |
probably damaging |
Het |
| Dnah14 |
G |
A |
1: 181,475,876 (GRCm39) |
R1376H |
probably benign |
Het |
| Foxj1 |
A |
G |
11: 116,222,675 (GRCm39) |
F376S |
probably damaging |
Het |
| Hsd17b11 |
A |
T |
5: 104,169,526 (GRCm39) |
I27N |
probably damaging |
Het |
| Itih1 |
A |
G |
14: 30,657,251 (GRCm39) |
V528A |
probably damaging |
Het |
| Ndor1 |
A |
G |
2: 25,139,329 (GRCm39) |
V283A |
probably benign |
Het |
| Nup54 |
G |
A |
5: 92,582,176 (GRCm39) |
T45I |
unknown |
Het |
| Or4c100 |
G |
A |
2: 88,356,517 (GRCm39) |
V197I |
probably damaging |
Het |
| Or7g16 |
T |
C |
9: 18,727,588 (GRCm39) |
M1V |
probably null |
Het |
| Pbld2 |
T |
C |
10: 62,883,744 (GRCm39) |
F70L |
probably damaging |
Het |
| Pdzph1 |
A |
G |
17: 59,239,476 (GRCm39) |
S951P |
probably damaging |
Het |
| Peg10 |
T |
TCCA |
6: 4,756,451 (GRCm39) |
|
probably benign |
Het |
| Prss1l |
A |
T |
6: 41,374,100 (GRCm39) |
Y234F |
probably damaging |
Het |
| Rasgrp1 |
A |
T |
2: 117,118,314 (GRCm39) |
C558* |
probably null |
Het |
| Slc12a6 |
A |
T |
2: 112,186,899 (GRCm39) |
H966L |
probably benign |
Het |
| Snx14 |
A |
T |
9: 88,297,740 (GRCm39) |
V176D |
probably damaging |
Het |
| St6galnac3 |
G |
T |
3: 152,911,129 (GRCm39) |
H277Q |
probably damaging |
Het |
| Syde2 |
T |
A |
3: 145,707,727 (GRCm39) |
D822E |
possibly damaging |
Het |
| Syne2 |
A |
T |
12: 75,989,681 (GRCm39) |
E1853D |
probably benign |
Het |
| Tigd4 |
T |
C |
3: 84,501,971 (GRCm39) |
V296A |
possibly damaging |
Het |
| Tmed4 |
A |
T |
11: 6,224,242 (GRCm39) |
|
probably benign |
Het |
| Trmt6 |
A |
T |
2: 132,651,826 (GRCm39) |
I198N |
probably damaging |
Het |
| Ubap2 |
A |
G |
4: 41,195,201 (GRCm39) |
S1117P |
possibly damaging |
Het |
| Wasl |
A |
T |
6: 24,634,594 (GRCm39) |
Y103N |
probably damaging |
Het |
| Zfp936 |
T |
A |
7: 42,838,848 (GRCm39) |
V105D |
possibly damaging |
Het |
|
| Other mutations in Zfp628 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00849:Zfp628
|
APN |
7 |
4,923,805 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0107:Zfp628
|
UTSW |
7 |
4,923,167 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0110:Zfp628
|
UTSW |
7 |
4,922,732 (GRCm39) |
missense |
probably benign |
|
|
R0450:Zfp628
|
UTSW |
7 |
4,922,732 (GRCm39) |
missense |
probably benign |
|
|
R0469:Zfp628
|
UTSW |
7 |
4,922,732 (GRCm39) |
missense |
probably benign |
|
|
R0480:Zfp628
|
UTSW |
7 |
4,924,615 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0518:Zfp628
|
UTSW |
7 |
4,922,939 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R0521:Zfp628
|
UTSW |
7 |
4,922,939 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1081:Zfp628
|
UTSW |
7 |
4,923,182 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1846:Zfp628
|
UTSW |
7 |
4,923,866 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R1938:Zfp628
|
UTSW |
7 |
4,923,767 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1997:Zfp628
|
UTSW |
7 |
4,921,831 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2221:Zfp628
|
UTSW |
7 |
4,923,830 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2364:Zfp628
|
UTSW |
7 |
4,923,686 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3077:Zfp628
|
UTSW |
7 |
4,924,199 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R3964:Zfp628
|
UTSW |
7 |
4,924,744 (GRCm39) |
missense |
probably benign |
0.00 |
|
R3966:Zfp628
|
UTSW |
7 |
4,924,744 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6058:Zfp628
|
UTSW |
7 |
4,923,917 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6240:Zfp628
|
UTSW |
7 |
4,922,848 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R6516:Zfp628
|
UTSW |
7 |
4,923,201 (GRCm39) |
nonsense |
probably null |
|
|
R6962:Zfp628
|
UTSW |
7 |
4,922,549 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7180:Zfp628
|
UTSW |
7 |
4,924,063 (GRCm39) |
missense |
probably benign |
0.18 |
|
R7347:Zfp628
|
UTSW |
7 |
4,924,817 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7348:Zfp628
|
UTSW |
7 |
4,924,817 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7349:Zfp628
|
UTSW |
7 |
4,924,817 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8074:Zfp628
|
UTSW |
7 |
4,923,205 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8161:Zfp628
|
UTSW |
7 |
4,921,958 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8328:Zfp628
|
UTSW |
7 |
4,922,813 (GRCm39) |
missense |
probably benign |
|
|
R9116:Zfp628
|
UTSW |
7 |
4,924,202 (GRCm39) |
missense |
probably benign |
0.06 |
|
R9158:Zfp628
|
UTSW |
7 |
4,922,153 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9251:Zfp628
|
UTSW |
7 |
4,923,880 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9313:Zfp628
|
UTSW |
7 |
4,922,549 (GRCm39) |
missense |
probably benign |
|
|
RF018:Zfp628
|
UTSW |
7 |
4,923,948 (GRCm39) |
unclassified |
probably benign |
|
|
X0022:Zfp628
|
UTSW |
7 |
4,922,408 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TATAAATGCCCGGACTGCCC -3'
(R):5'- GAACCTTGGTGTCAGCTCTG -3'
Sequencing Primer
(F):5'- TATCAGTGCCCAGACTGCC -3'
(R):5'- AAGGTCTTGGGGCAGAGTG -3'
|
| Posted On |
2020-01-23 |
Incidental Mutation