Mutagenetix > Incidental Mutations

Incidental Mutation 'R8022:Nkiras2'

617476

Institutional Source

Beutler Lab

Gene Symbol

Nkiras2

Ensembl Gene

ENSMUSG00000017837

Gene Name

NFKB inhibitor interacting Ras-like protein 2

Synonyms

KBRAS2, 4930527H08Rik, 2410003M04Rik

MMRRC Submission

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8022 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

100619244-100627607 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 100624287 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Aspartic acid at position 28 (N28D)

Ref Sequence

ENSEMBL: ENSMUSP00000017981 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000014339] [ENSMUST00000017981] [ENSMUST00000051947] [ENSMUST00000103119] [ENSMUST00000107376] [ENSMUST00000142993]

AlphaFold

Q9CR56

Predicted Effect

probably benign
Transcript: ENSMUST00000014339

SMART Domains

Protein: ENSMUSP00000014339
Gene: ENSMUSG00000014195

Domain	Start	End	E-Value	Type
TPR	28	61	3.39e-7	SMART
TPR	62	95	1.11e-2	SMART
TPR	96	129	4.09e-1	SMART
Blast:TPR	142	175	4e-13	BLAST
Blast:TPR	176	209	1e-13	BLAST
TPR	210	243	2.29e-4	SMART
TPR	256	289	1.11e-2	SMART
TPR	294	327	2.87e-5	SMART
TPR	328	361	1.83e-3	SMART
DnaJ	380	443	2.93e-29	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000017981
AA Change: N28D

PolyPhen 2 Score 0.232 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000017981
Gene: ENSMUSG00000017837
AA Change: N28D

Domain	Start	End	E-Value	Type
Pfam:Arf	1	168	4.3e-9	PFAM
Pfam:Roc	6	124	2.2e-13	PFAM
Pfam:MMR_HSR1	6	165	3.1e-6	PFAM
Pfam:Ras	6	170	2.9e-27	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000051947
AA Change: N28D

PolyPhen 2 Score 0.232 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000059559
Gene: ENSMUSG00000017837
AA Change: N28D

Domain	Start	End	E-Value	Type
Pfam:Arf	1	168	5.6e-9	PFAM
Pfam:Miro	6	123	2.2e-21	PFAM
Pfam:Ras	6	170	4.5e-27	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000103119

SMART Domains

Protein: ENSMUSP00000099408
Gene: ENSMUSG00000014198

Domain	Start	End	E-Value	Type
low complexity region	2	24	N/A	INTRINSIC
ZnF_U1	72	108	4.36e-2	SMART
ZnF_C2H2	77	99	1.51e0	SMART
low complexity region	125	141	N/A	INTRINSIC
low complexity region	143	161	N/A	INTRINSIC
low complexity region	181	200	N/A	INTRINSIC
ZnF_U1	225	259	5.72e-4	SMART
ZnF_C2H2	228	252	7.11e0	SMART
ZnF_U1	294	328	7.44e-3	SMART
ZnF_C2H2	297	321	4.34e0	SMART
low complexity region	347	365	N/A	INTRINSIC
low complexity region	382	405	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000107376
AA Change: N28D

PolyPhen 2 Score 0.232 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000102999
Gene: ENSMUSG00000017837
AA Change: N28D

Domain	Start	End	E-Value	Type
Pfam:Arf	1	168	5.6e-9	PFAM
Pfam:Miro	6	123	2.2e-21	PFAM
Pfam:Ras	6	170	4.5e-27	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000142993
AA Change: N28D

PolyPhen 2 Score 0.232 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000114456
Gene: ENSMUSG00000017837
AA Change: N28D

Domain	Start	End	E-Value	Type
Pfam:Arf	1	151	1.3e-8	PFAM
Pfam:Miro	6	123	1.4e-21	PFAM
Pfam:MMR_HSR1	6	145	4.5e-6	PFAM
Pfam:Ras	6	153	2.9e-25	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000155152

SMART Domains

Protein: ENSMUSP00000116793
Gene: ENSMUSG00000014195

Domain	Start	End	E-Value	Type
TPR	19	52	3.39e-7	SMART
TPR	53	86	1.11e-2	SMART
Blast:TPR	95	128	1e-13	BLAST
Blast:TPR	129	162	3e-14	BLAST
TPR	163	196	2.29e-4	SMART
TPR	209	242	1.11e-2	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 87 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acacb	A	T	5: 114,223,854	T1386S	probably benign	Het
AI661453	T	G	17: 47,466,236	S296A	unknown	Het
Ambp	G	T	4: 63,144,197	N268K	probably damaging	Het
Ankrd11	T	C	8: 122,887,593	K2503E	probably damaging	Het
Ap1g1	C	A	8: 109,832,735	R221S	possibly damaging	Het
Ap5z1	T	C	5: 142,470,149		probably null	Het
Aspa	A	C	11: 73,322,206	N103K	probably benign	Het
BC049730	T	A	7: 24,714,174	I205N	possibly damaging	Het
Bend7	G	A	2: 4,752,779	V211I	probably benign	Het
Bsn	A	G	9: 108,114,404	M1383T	probably benign	Het
Cad	G	T	5: 31,068,806	V1117F	probably damaging	Het
Cdh2	A	G	18: 16,590,301	L856S	probably damaging	Het
Cdh7	T	A	1: 110,061,108	S247T	probably benign	Het
Ces1b	A	G	8: 93,069,315		probably null	Het
Chd7	T	A	4: 8,751,605	V34E	unknown	Het
Clca3a2	A	T	3: 144,805,766	F623I	probably damaging	Het
Cope	T	G	8: 70,312,803	M217R	probably benign	Het
Crim1	T	A	17: 78,315,555	I394N	possibly damaging	Het
Crnkl1	A	T	2: 145,918,566	I644N	probably damaging	Het
Cry1	G	A	10: 85,146,402	A360V	probably damaging	Het
Ctcfl	A	T	2: 173,118,766	V8D	probably benign	Het
Cyp2d34	G	A	15: 82,616,114	Q475*	probably null	Het
Cyp39a1	T	C	17: 43,746,577	Y436H	probably damaging	Het
Cyp3a25	T	A	5: 145,977,668	Q484L	probably benign	Het
Dnah1	A	G	14: 31,265,014	F3607S	probably damaging	Het
Dnali1	T	A	4: 125,065,530	K23N	possibly damaging	Het
Ecel1	T	C	1: 87,153,330	I313V	probably benign	Het
Ehhadh	C	A	16: 21,777,820	A53S	probably benign	Het
Epcam	T	C	17: 87,646,308	S277P	probably benign	Het
Fbxo10	T	C	4: 45,062,062	I155V	possibly damaging	Het
Fgd6	A	T	10: 94,044,344	K353N	possibly damaging	Het
Glce	A	T	9: 62,060,591	M426K	probably benign	Het
Glmp	A	T	3: 88,326,520	N228I	probably damaging	Het
Gm4787	C	A	12: 81,377,720	V555F	possibly damaging	Het
Gm5114	T	A	7: 39,409,376	H273L	probably benign	Het
Gzmg	T	A	14: 56,157,446	T122S	probably benign	Het
Hace1	T	C	10: 45,700,970	V820A	probably damaging	Het
Igf2r	T	A	17: 12,718,795	D535V	probably damaging	Het
Kcnd3	A	G	3: 105,458,873	M20V	probably benign	Het
Kcnn3	T	G	3: 89,609,703	I473S	possibly damaging	Het
Klhl35	T	A	7: 99,473,239	F94Y	unknown	Het
Kmt2c	C	T	5: 25,281,680	V4712I	possibly damaging	Het
Lepr	A	G	4: 101,782,557	E740G	probably benign	Het
Lmod3	T	C	6: 97,248,299	D187G	probably benign	Het
Lsm3	C	T	6: 91,519,561	H49Y	probably benign	Het
Magi1	T	C	6: 93,697,365	S962G	probably damaging	Het
Man2b1	G	A	8: 85,095,613	R782Q	probably damaging	Het
Mical2	A	T	7: 112,303,767	K148N	probably damaging	Het
Nbeal1	C	T	1: 60,260,272	Q1256*	probably null	Het
Ncam1	G	T	9: 49,564,892	A299D	possibly damaging	Het
Ncapg	A	G	5: 45,681,794	D512G	probably damaging	Het
Nprl2	A	C	9: 107,543,061	K53T	probably damaging	Het
Nr4a3	T	A	4: 48,051,510	I88N	probably damaging	Het
Oas3	A	G	5: 120,756,966	I986T	possibly damaging	Het
Olfr809	A	T	10: 129,776,785	L305F	possibly damaging	Het
Pcsk1	A	T	13: 75,099,293	Y187F	possibly damaging	Het
Pgc	A	G	17: 47,728,776	T32A	probably benign	Het
Ranbp2	A	C	10: 58,485,861	D2660A	possibly damaging	Het
Retreg1	A	G	15: 25,843,479	R46G		Het
Rrbp1	C	A	2: 143,956,792	K1100N	probably benign	Het
Rsph10b	A	T	5: 143,967,232	T676S	probably benign	Het
Setdb1	A	T	3: 95,338,599	F672I	probably damaging	Het
Setdb1	T	A	3: 95,347,085	D195V	probably damaging	Het
Slc12a8	A	G	16: 33,625,086	E450G	probably benign	Het
Slc1a7	G	A	4: 108,012,276	V513M	probably benign	Het
Slc25a12	A	T	2: 71,275,189	V667E	unknown	Het
Slc39a3	T	C	10: 81,031,277	T212A	probably benign	Het
Slc45a1	C	T	4: 150,638,309	G373S	possibly damaging	Het
Snx11	G	A	11: 96,772,854	T53M	probably damaging	Het
Snx33	A	G	9: 56,925,340	F482L	possibly damaging	Het
Srebf2	C	T	15: 82,178,765	R468C	probably damaging	Het
Stk32a	C	T	18: 43,315,101	Q382*	probably null	Het
Sun3	C	A	11: 9,023,376	S167I	probably damaging	Het
Sycp2	A	G	2: 178,355,062	L1116P	probably damaging	Het
Thbs4	T	G	13: 92,752,447	T913P	probably damaging	Het
Trav8d-1	C	T	14: 52,778,827	Q57*	probably null	Het
Trio	C	G	15: 27,749,866	V2250L	probably benign	Het
Unc119b	A	T	5: 115,127,043	I204N	probably damaging	Het
Usp4	A	G	9: 108,378,471	E576G	probably damaging	Het
Uvssa	T	A	5: 33,409,504	L515Q	probably damaging	Het
Xkr8	T	C	4: 132,732,338	Y43C	probably damaging	Het
Xpo6	G	A	7: 126,169,254	L94F	probably benign	Het
Zbtb11	A	G	16: 56,006,020	K804R	probably damaging	Het
Zfp616	A	G	11: 74,084,068	R479G	probably benign	Het
Zfp661	T	C	2: 127,577,924	T99A	probably benign	Het
Zfp839	A	T	12: 110,855,098	Q115H	probably damaging	Het
Zyg11a	C	T	4: 108,189,568		probably null	Het

Other mutations in Nkiras2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00434:Nkiras2	APN	11	100624982	missense	probably damaging	0.97
IGL03080:Nkiras2	APN	11	100624279	splice site	probably null
R0543:Nkiras2	UTSW	11	100624192	unclassified	probably benign
R0733:Nkiras2	UTSW	11	100624932	splice site	probably null
R1192:Nkiras2	UTSW	11	100625980	splice site	probably null
R1698:Nkiras2	UTSW	11	100625163	missense	probably damaging	1.00
R5727:Nkiras2	UTSW	11	100625027	missense	probably damaging	1.00
R5973:Nkiras2	UTSW	11	100626040	missense	probably damaging	0.99
R6427:Nkiras2	UTSW	11	100625035	missense	probably damaging	1.00
R7961:Nkiras2	UTSW	11	100619802	unclassified	probably benign

Predicted Primers

PCR Primer
(F):5'- GCTCAGTAGTTCGGTAAACATCAG -3'
(R):5'- CCTCCATTGTGGGGTTCAAAC -3'

Sequencing Primer
(F):5'- TAAACATCAGGGTGGTGCTAACTCC -3'
(R):5'- ACCCAAGGACTAGTACATGTTAG -3'

Posted On

2020-01-23