Mutagenetix > Incidental Mutation

Incidental Mutation 'R8024:Clec2e'

617578

Institutional Source

Beutler Lab

Gene Symbol

Clec2e

Ensembl Gene

ENSMUSG00000030155

Gene Name

C-type lectin domain family 2, member e

Synonyms

Clra

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.048) question?

Stock #

R8024 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

129091998-129100913 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 129094425 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Tyrosine at position 150 (H150Y)

Ref Sequence

ENSEMBL: ENSMUSP00000032258 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000032258]

AlphaFold

no structure available at present

Predicted Effect

possibly damaging
Transcript: ENSMUST00000032258
AA Change: H150Y

PolyPhen 2 Score 0.834 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000032258
Gene: ENSMUSG00000030155
AA Change: H150Y

Domain	Start	End	E-Value	Type
transmembrane domain	49	71	N/A	INTRINSIC
CLECT	89	200	1.03e-21	SMART

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

100% (74/74)

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210408I21Rik	A	T	13: 77,612,594	N1257Y	probably benign	Het
2310057J18Rik	A	T	10: 28,982,595	Y133*	probably null	Het
2310057J18Rik	A	C	10: 28,986,217	S26A	possibly damaging	Het
4931409K22Rik	A	G	5: 24,550,636	M296T	possibly damaging	Het
9930012K11Rik	G	T	14: 70,156,667	P220T	probably damaging	Het
A430105I19Rik	A	G	2: 118,760,524		probably null	Het
Adam1b	A	C	5: 121,500,923	S686R	probably benign	Het
Adam8	T	C	7: 139,987,576	D418G	probably damaging	Het
Adcy8	A	G	15: 64,920,246	L287P	probably damaging	Het
Adhfe1	T	A	1: 9,563,855	M373K	probably benign	Het
Alpk2	T	C	18: 65,305,035	S1096G	probably benign	Het
Ankmy1	A	G	1: 92,884,994	V531A	probably benign	Het
Ano3	C	T	2: 110,667,783	E738K	probably damaging	Het
Ano4	T	A	10: 88,971,332	I796F	probably damaging	Het
Apeh	T	C	9: 108,092,591	E190G	probably benign	Het
Cadm3	A	G	1: 173,338,055	L346P	probably damaging	Het
Cnga4	A	T	7: 105,406,835	N318Y	probably damaging	Het
Cnr2	T	A	4: 135,916,885	F91L	probably damaging	Het
Diaph3	T	A	14: 86,656,399	E1147V	probably damaging	Het
Elmo2	T	C	2: 165,291,855	T738A	unknown	Het
Exoc4	T	A	6: 33,347,931	W387R	probably damaging	Het
Fam173b	T	C	15: 31,608,171	Y123H	probably damaging	Het
Focad	T	C	4: 88,397,000	V1379A	unknown	Het
Frmd4a	T	C	2: 4,603,702	S794P	probably damaging	Het
Ftl1-ps1	A	G	13: 74,407,051	T150A	probably benign	Het
Gm43517	A	T	12: 49,389,626		probably benign	Het
Gm5773	C	T	3: 93,773,168	A49V	probably benign	Het
Helz	T	A	11: 107,686,421	L1867Q	unknown	Het
Il22ra1	A	G	4: 135,734,278	H118R	probably benign	Het
Inf2	C	T	12: 112,608,902	P856S	unknown	Het
Ints5	T	A	19: 8,896,140	L488I	probably damaging	Het
Kifc1	G	A	17: 33,883,203	R479C	probably damaging	Het
Lrba	T	A	3: 86,295,401	C289*	probably null	Het
Mael	A	G	1: 166,226,627	L196S	probably damaging	Het
Med23	T	A	10: 24,879,683	S229R	possibly damaging	Het
Mroh9	T	C	1: 163,039,233	N645D	probably benign	Het
Myom3	G	A	4: 135,801,748	V1132I	probably benign	Het
Naalad2	T	G	9: 18,397,473		probably benign	Het
Ndufa13	A	T	8: 69,894,537	L71H	probably damaging	Het
Nepro	A	T	16: 44,731,415	H212L	probably benign	Het
Nmd3	T	A	3: 69,729,965		probably benign	Het
Nox4	T	A	7: 87,304,910	L141Q	probably damaging	Het
Olfr1254	T	C	2: 89,789,046	E102G	probably benign	Het
Olfr283	T	A	15: 98,378,997	M38L	probably benign	Het
Olfr473	T	C	7: 107,934,438	V306A	probably benign	Het
Olfr482	T	A	7: 108,095,289	T94S	probably benign	Het
Olfr811	T	G	10: 129,801,943	E194A	probably damaging	Het
Pfpl	A	G	19: 12,430,206	D607G	possibly damaging	Het
Pkd1l2	A	T	8: 117,076,182	F233L	possibly damaging	Het
Prl6a1	A	G	13: 27,318,695		probably benign	Het
Ptprz1	A	T	6: 23,042,751	E2058V	probably damaging	Het
Rag1	A	T	2: 101,642,507	N763K	probably damaging	Het
Rhbg	A	C	3: 88,248,453	D63E	probably damaging	Het
Rrm1	T	A	7: 102,457,265	F330L	probably benign	Het
Scaf8	A	T	17: 3,159,293	Q97L	unknown	Het
Sdr9c7	G	A	10: 127,898,882	V80I	probably benign	Het
Slc18a1	A	G	8: 69,075,147	V4A	probably benign	Het
Slco3a1	T	A	7: 74,554,470	I41F	probably benign	Het
Slirp	T	C	12: 87,447,600	V45A	probably damaging	Het
Spata31	A	T	13: 64,922,804	Q922L	probably benign	Het
Spg11	A	G	2: 122,097,321	S661P	possibly damaging	Het
Stab2	G	T	10: 86,846,052	T2495K	probably benign	Het
Supt16	A	G	14: 52,170,875	I871T	probably damaging	Het
Sval2	A	G	6: 41,860,364	Q9R	probably damaging	Het
Syngap1	A	T	17: 26,941,452	M1L	probably benign	Het
Tfpi	A	T	2: 84,453,922	M62K	possibly damaging	Het
Tm4sf1	A	T	3: 57,287,765	Y200*	probably null	Het
Tmc1	A	T	19: 20,900,817	W105R	probably damaging	Het
Tmtc2	T	C	10: 105,190,126	E827G	probably benign	Het
Tollip	T	C	7: 141,892,826	I33V	probably benign	Het
Unc80	T	A	1: 66,606,644	V1493D	possibly damaging	Het
Vmn2r6	G	A	3: 64,559,824	R85W	probably benign	Het
Vwa5a	C	A	9: 38,736,020	S565*	probably null	Het
Xbp1	T	A	11: 5,521,910	V12D	probably benign	Het

Other mutations in Clec2e

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01785:Clec2e	APN	6	129093401	utr 3 prime	probably benign
IGL02529:Clec2e	APN	6	129098496	splice site	probably benign
IGL03242:Clec2e	APN	6	129095026	missense	probably damaging	1.00
IGL03289:Clec2e	APN	6	129098455	missense	probably damaging	0.97
R0090:Clec2e	UTSW	6	129095218	splice site	probably null
R0390:Clec2e	UTSW	6	129093468	missense	probably damaging	0.99
R1468:Clec2e	UTSW	6	129093496	nonsense	probably null
R1468:Clec2e	UTSW	6	129093496	nonsense	probably null
R1477:Clec2e	UTSW	6	129095200	missense	probably benign	0.03
R3721:Clec2e	UTSW	6	129094410	nonsense	probably null
R4769:Clec2e	UTSW	6	129100827	missense	probably benign	0.08
R5589:Clec2e	UTSW	6	129098428	missense	probably benign	0.01
R6056:Clec2e	UTSW	6	129100809	missense	probably benign	0.00
R6156:Clec2e	UTSW	6	129095098	missense	possibly damaging	0.94
R7762:Clec2e	UTSW	6	129095128	missense	possibly damaging	0.92
R8973:Clec2e	UTSW	6	129093411	nonsense	probably null
R9299:Clec2e	UTSW	6	129095129	missense	probably benign	0.24
R9420:Clec2e	UTSW	6	129094457	missense	possibly damaging	0.90
R9644:Clec2e	UTSW	6	129093480	missense	probably benign	0.02

Predicted Primers

PCR Primer
(F):5'- TGTGTTGAAAGATGGCCAATG -3'
(R):5'- CTGAGAACTAAGGGTTATTATGGCTCC -3'

Sequencing Primer
(F):5'- TGTGTTGAAAGATGGCCAATGAATTG -3'
(R):5'- GCTCCAAAGTTGATGAGCCTCAG -3'

Posted On

2020-01-23