Incidental Mutation 'R8031:Vmn2r49'
ID 617947
Institutional Source Beutler Lab
Gene Symbol Vmn2r49
Ensembl Gene ENSMUSG00000096180
Gene Name vomeronasal 2, receptor 49
Synonyms
MMRRC Submission
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.110) question?
Stock # R8031 (G1)
Quality Score 163.009
Status Not validated
Chromosome 7
Chromosomal Location 9976245-9992139 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 9986481 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Glycine at position 361 (E361G)
Ref Sequence ENSEMBL: ENSMUSP00000104190 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000108550]
AlphaFold D3Z6L3
Predicted Effect possibly damaging
Transcript: ENSMUST00000108550
AA Change: E361G

PolyPhen 2 Score 0.666 (Sensitivity: 0.86; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000104190
Gene: ENSMUSG00000096180
AA Change: E361G

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 73 469 1.4e-33 PFAM
Pfam:NCD3G 512 565 5.1e-21 PFAM
Pfam:7tm_3 598 833 3.5e-55 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 100% (60/60)
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ace3 T C 11: 105,998,098 probably null Het
Arhgdib A G 6: 136,924,276 Y152H probably benign Het
Atxn10 T G 15: 85,393,393 S354A probably benign Het
Cacng6 T C 7: 3,424,885 V75A possibly damaging Het
Cdc23 A G 18: 34,651,688 V7A unknown Het
Cdc40 T A 10: 40,852,516 E157D probably benign Het
Defa25 T A 8: 21,085,237 N77K probably benign Het
Dsc2 C T 18: 20,032,274 G881R possibly damaging Het
Efcab6 T C 15: 83,983,498 K260E possibly damaging Het
Eif4a3 T C 11: 119,288,905 Y352C probably damaging Het
Erc2 A T 14: 28,011,692 K566N probably damaging Het
Fam3b A C 16: 97,481,852 Y74* probably null Het
Flg2 T A 3: 93,220,214 S2144R unknown Het
Fmo4 G T 1: 162,798,852 S375* probably null Het
Fsip2 A G 2: 82,986,891 T4323A probably benign Het
Gm11639 T C 11: 104,881,469 V2659A possibly damaging Het
Gm16503 A T 4: 147,541,310 H87L unknown Het
Hes7 C T 11: 69,122,765 A150V probably damaging Het
Hk1 T A 10: 62,296,699 N190I probably benign Het
Il17rc A G 6: 113,482,821 D576G probably damaging Het
Inhba T A 13: 16,026,275 S141T possibly damaging Het
Itga8 G T 2: 12,155,486 D840E probably benign Het
Kazn T C 4: 142,154,551 E126G Het
Kcnk13 A G 12: 99,966,179 Y78C probably damaging Het
Kcnt1 C A 2: 25,908,042 probably benign Het
Krt42 G C 11: 100,265,039 R294G possibly damaging Het
Myo9a A G 9: 59,780,091 K160E probably benign Het
Nlrp1b T C 11: 71,216,921 R585G probably benign Het
Ntrk2 T C 13: 58,874,379 I416T probably benign Het
Olfr1080 G A 2: 86,554,103 T7I probably damaging Het
Olfr1217 A T 2: 89,023,628 I125N probably damaging Het
Olfr177 T C 16: 58,872,691 N153S probably benign Het
Olfr652 T A 7: 104,565,109 I296N probably damaging Het
P4ha3 A G 7: 100,292,698 E106G probably damaging Het
Pcif1 A G 2: 164,886,522 N233S probably damaging Het
Pgm2l1 C A 7: 100,272,418 R619S probably damaging Het
Pkhd1l1 A G 15: 44,512,834 Q964R probably damaging Het
Pla2g4a T A 1: 149,901,213 I89F possibly damaging Het
Ppp1cc G A 5: 122,174,088 A306T probably benign Het
Psmd4 T C 3: 95,035,892 D67G probably damaging Het
Ptprt G A 2: 162,135,457 T307I probably damaging Het
Rnf213 C A 11: 119,430,281 C1188* probably null Het
Ror2 C T 13: 53,113,157 C426Y probably damaging Het
Sacs C T 14: 61,204,191 H1229Y probably damaging Het
Slc25a25 A T 2: 32,421,505 L118Q probably damaging Het
Slc38a6 G A 12: 73,350,603 A340T probably benign Het
Smarca5 A T 8: 80,704,682 Y969N probably damaging Het
Sorbs1 C A 19: 40,326,489 M626I probably benign Het
Spink5 T A 18: 44,010,236 D753E probably benign Het
Taf1d T G 9: 15,310,399 I226S probably damaging Het
Tmem225 A G 9: 40,149,393 I83V possibly damaging Het
Top2b A G 14: 16,412,986 D965G probably damaging Het
Traf3ip1 A G 1: 91,501,419 K303E probably damaging Het
Ube2n C T 10: 95,541,382 R70C probably benign Het
Ubl7 C T 9: 57,923,206 P312S probably damaging Het
Vmn1r34 A T 6: 66,637,181 M191K probably damaging Het
Vmn2r103 C T 17: 19,793,497 H184Y probably benign Het
Vmn2r104 T C 17: 20,042,786 I138V probably benign Het
Vmn2r78 T C 7: 86,954,867 L751P probably damaging Het
Zc3h13 T A 14: 75,330,630 I1121N not run Het
Zfp235 T A 7: 24,141,689 V511E probably benign Het
Other mutations in Vmn2r49
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01800:Vmn2r49 APN 7 9976674 nonsense probably null
IGL01892:Vmn2r49 APN 7 9984763 missense probably benign 0.00
IGL02505:Vmn2r49 APN 7 9976451 missense probably benign 0.27
IGL03345:Vmn2r49 APN 7 9984694 missense probably damaging 1.00
PIT4434001:Vmn2r49 UTSW 7 9976835 missense probably damaging 1.00
PIT4520001:Vmn2r49 UTSW 7 9989061 missense probably benign 0.06
R0367:Vmn2r49 UTSW 7 9976430 missense probably damaging 1.00
R0609:Vmn2r49 UTSW 7 9976306 missense probably benign 0.40
R0931:Vmn2r49 UTSW 7 9986398 missense possibly damaging 0.55
R1594:Vmn2r49 UTSW 7 9976623 missense probably damaging 1.00
R1969:Vmn2r49 UTSW 7 9986308 missense probably damaging 0.99
R4831:Vmn2r49 UTSW 7 9986425 missense probably benign
R4944:Vmn2r49 UTSW 7 9989032 missense probably benign
R4945:Vmn2r49 UTSW 7 9986287 nonsense probably null
R5109:Vmn2r49 UTSW 7 9976277 missense probably benign 0.01
R5141:Vmn2r49 UTSW 7 9986373 missense probably benign 0.01
R5778:Vmn2r49 UTSW 7 9976347 missense probably damaging 1.00
R6168:Vmn2r49 UTSW 7 9984786 missense probably benign 0.01
R6513:Vmn2r49 UTSW 7 9976597 missense probably damaging 0.99
R7347:Vmn2r49 UTSW 7 9986814 missense probably benign 0.00
R7464:Vmn2r49 UTSW 7 9988893 missense probably benign 0.03
R7495:Vmn2r49 UTSW 7 9976899 nonsense probably null
R7750:Vmn2r49 UTSW 7 9976258 missense probably damaging 1.00
R9158:Vmn2r49 UTSW 7 9988908 missense probably damaging 1.00
R9347:Vmn2r49 UTSW 7 9984747 missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- CTATTGCCTGATTATCAGCCTGTTG -3'
(R):5'- CCTCCCATTTTACAGAGAATATGGATC -3'

Sequencing Primer
(F):5'- GCAGATTCATCTCATGGAGGGC -3'
(R):5'- GGATCACCACAAAACAATTGAATTTC -3'
Posted On 2020-01-23