Mutagenetix > Incidental Mutation

Incidental Mutation 'R8053:Or5g23'

619163

Institutional Source

Beutler Lab

Gene Symbol

Or5g23

Ensembl Gene

ENSMUSG00000075215

Gene Name

olfactory receptor family 5 subfamily G member 23

Synonyms

MOR175-9, Olfr1000, GA_x6K02T2Q125-47087719-47086775

MMRRC Submission

067490-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.056) question?

Stock #

R8053 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

85438308-85439252 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 85439234 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 7 (T7A)

Ref Sequence

ENSEMBL: ENSMUSP00000149982 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099921] [ENSMUST00000213837] [ENSMUST00000216571]

AlphaFold

Q7TR99

Predicted Effect

probably damaging
Transcript: ENSMUST00000099921
AA Change: T7A

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000097505
Gene: ENSMUSG00000075215
AA Change: T7A

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	1.1e-49	PFAM
Pfam:7tm_1	41	290	2.9e-17	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000213837
AA Change: T7A

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)

Predicted Effect

probably damaging
Transcript: ENSMUST00000216571
AA Change: T7A

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
5730507C01Rik	C	T	12: 18,583,728 (GRCm39)	R263*	probably null	Het
Abca12	G	A	1: 71,388,328 (GRCm39)	R181*	probably null	Het
Adar	T	C	3: 89,654,592 (GRCm39)	L908P	probably damaging	Het
Ankrd55	C	T	13: 112,459,687 (GRCm39)	R94C	probably damaging	Het
Aopep	A	T	13: 63,338,345 (GRCm39)	K574*	probably null	Het
Carf	A	T	1: 60,167,197 (GRCm39)	T177S	probably benign	Het
Ccdc162	C	A	10: 41,520,577 (GRCm39)	G693V	probably benign	Het
Ccng2	C	G	5: 93,421,202 (GRCm39)	S237R	probably benign	Het
Chd4	G	T	6: 125,105,779 (GRCm39)	E1799*	probably null	Het
Chrna3	T	A	9: 54,922,674 (GRCm39)	N378I	probably benign	Het
Clec4a2	T	C	6: 123,104,998 (GRCm39)	V96A	probably benign	Het
Cntnap5b	T	A	1: 100,318,402 (GRCm39)	L683Q	probably damaging	Het
Crisp4	T	A	1: 18,194,498 (GRCm39)	Q208L	probably benign	Het
Crocc	A	G	4: 140,770,230 (GRCm39)		probably null	Het
Cyp2ab1	T	C	16: 20,133,018 (GRCm39)	E192G	probably benign	Het
Cyrib	T	C	15: 63,813,832 (GRCm39)	D155G	probably damaging	Het
Daglb	A	G	5: 143,489,024 (GRCm39)	K627R	probably benign	Het
Desi2	G	A	1: 178,065,482 (GRCm39)	W16*	probably null	Het
Dtx3l	T	C	16: 35,759,322 (GRCm39)		probably benign	Het
Elf2	A	G	3: 51,215,551 (GRCm39)	V53A	possibly damaging	Het
Eomes	A	G	9: 118,309,621 (GRCm39)	D325G	probably damaging	Het
Etl4	A	T	2: 20,666,774 (GRCm39)	L60F	probably damaging	Het
Exoc4	A	G	6: 33,309,191 (GRCm39)	D271G	probably benign	Het
F5	A	G	1: 164,020,338 (GRCm39)	I938V	probably benign	Het
Fdxr	T	A	11: 115,160,665 (GRCm39)	K290M	probably benign	Het
Fgd5	G	A	6: 91,966,425 (GRCm39)	S886N	probably benign	Het
Gm11595	G	A	11: 99,662,954 (GRCm39)	S242F	unknown	Het
Gm14322	A	T	2: 177,411,424 (GRCm39)	Q78L	probably damaging	Het
Gm8267	A	T	14: 44,962,307 (GRCm39)	S38T	possibly damaging	Het
Gpr75	A	T	11: 30,841,559 (GRCm39)	T155S	probably benign	Het
Hectd3	T	C	4: 116,858,055 (GRCm39)	S628P	possibly damaging	Het
Hrh2	A	G	13: 54,368,104 (GRCm39)	T27A	probably benign	Het
Kif16b	G	A	2: 142,695,634 (GRCm39)	R157C	probably damaging	Het
Krt16	T	C	11: 100,137,613 (GRCm39)	Y364C	probably damaging	Het
Lrrc37	T	A	11: 103,495,392 (GRCm39)	K2809I	unknown	Het
Map2k5	T	A	9: 63,250,707 (GRCm39)	N95I	probably benign	Het
Melk	A	G	4: 44,318,109 (GRCm39)	Y170C	probably damaging	Het
Mthfd1	T	A	12: 76,327,282 (GRCm39)	D123E	probably damaging	Het
Muc2	A	T	7: 141,284,575 (GRCm39)	Y827F	probably benign	Het
Myh15	T	A	16: 48,963,302 (GRCm39)	M1081K	possibly damaging	Het
Nbeal1	A	G	1: 60,318,954 (GRCm39)	T1998A	probably damaging	Het
Neb	T	A	2: 52,176,029 (GRCm39)	T1477S	possibly damaging	Het
Nox4	C	A	7: 87,019,255 (GRCm39)	P416Q	probably damaging	Het
Or10ak7	A	G	4: 118,791,308 (GRCm39)	S246P	probably damaging	Het
Or1e31	T	C	11: 73,689,822 (GRCm39)	T254A	probably benign	Het
Or2j3	A	T	17: 38,616,101 (GRCm39)	F84I	probably benign	Het
Or4c123	A	T	2: 89,127,540 (GRCm39)	F25I	possibly damaging	Het
Pcdhga4	A	G	18: 37,819,308 (GRCm39)	K286E	probably benign	Het
Pde10a	A	G	17: 9,193,604 (GRCm39)	T679A	probably benign	Het
Phc2	C	T	4: 128,603,433 (GRCm39)	Q188*	probably null	Het
Pramel12	C	A	4: 143,144,208 (GRCm39)	Q185K	probably benign	Het
Prdm15	A	G	16: 97,636,807 (GRCm39)	M170T	probably benign	Het
Rab20	G	T	8: 11,504,443 (GRCm39)	Q86K	probably damaging	Het
Rev1	T	C	1: 38,102,222 (GRCm39)	I714V	possibly damaging	Het
Rexo2	A	G	9: 48,386,418 (GRCm39)		probably null	Het
Rnf213	A	G	11: 119,293,473 (GRCm39)	K75E		Het
Sdk2	C	T	11: 113,745,177 (GRCm39)	R706Q	probably damaging	Het
Sema3c	C	T	5: 17,860,020 (GRCm39)	T95I	probably benign	Het
Sh3rf2	T	A	18: 42,286,087 (GRCm39)	S527T	probably damaging	Het
Sis	A	T	3: 72,856,901 (GRCm39)	Y434*	probably null	Het
Slc16a6	G	A	11: 109,349,395 (GRCm39)	T222I	probably damaging	Het
Smad6	A	G	9: 63,927,789 (GRCm39)	L173P	probably damaging	Het
Sugct	T	A	13: 17,476,554 (GRCm39)	N310I	probably damaging	Het
Syne1	T	A	10: 5,002,658 (GRCm39)	K259*	probably null	Het
Taar6	A	G	10: 23,861,144 (GRCm39)	V134A	possibly damaging	Het
Tmem199	A	G	11: 78,398,612 (GRCm39)	I184T	possibly damaging	Het
Tnrc18	G	T	5: 142,736,385 (GRCm39)	D1530E	unknown	Het
Tnxb	G	A	17: 34,923,153 (GRCm39)	V2579M	probably damaging	Het
Vangl2	A	G	1: 171,832,303 (GRCm39)	F518L	probably damaging	Het
Vmn2r40	T	C	7: 8,911,245 (GRCm39)	T683A		Het
Wapl	C	T	14: 34,414,278 (GRCm39)	T380I	probably damaging	Het
Zfp874b	A	T	13: 67,622,217 (GRCm39)	H360Q	probably damaging	Het

Other mutations in Or5g23

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01548:Or5g23	APN	2	85,439,105 (GRCm39)	missense	probably benign
IGL01872:Or5g23	APN	2	85,438,673 (GRCm39)	missense	probably benign
IGL01955:Or5g23	APN	2	85,439,051 (GRCm39)	missense	probably benign	0.12
IGL02132:Or5g23	APN	2	85,438,664 (GRCm39)	missense	probably benign	0.00
IGL02139:Or5g23	APN	2	85,438,574 (GRCm39)	nonsense	probably null
IGL02717:Or5g23	APN	2	85,439,116 (GRCm39)	missense	probably damaging	1.00
IGL02950:Or5g23	APN	2	85,438,501 (GRCm39)	missense	possibly damaging	0.92
R1866:Or5g23	UTSW	2	85,439,188 (GRCm39)	missense	probably benign	0.05
R1868:Or5g23	UTSW	2	85,438,409 (GRCm39)	missense	probably damaging	0.98
R1869:Or5g23	UTSW	2	85,438,844 (GRCm39)	missense	probably benign	0.23
R2256:Or5g23	UTSW	2	85,438,807 (GRCm39)	missense	possibly damaging	0.81
R2919:Or5g23	UTSW	2	85,438,754 (GRCm39)	missense	probably benign	0.06
R4736:Or5g23	UTSW	2	85,438,327 (GRCm39)	missense	probably benign
R5197:Or5g23	UTSW	2	85,438,791 (GRCm39)	missense	probably benign	0.01
R5256:Or5g23	UTSW	2	85,438,817 (GRCm39)	missense	probably benign
R5367:Or5g23	UTSW	2	85,438,718 (GRCm39)	missense	probably damaging	0.99
R5389:Or5g23	UTSW	2	85,438,627 (GRCm39)	missense	probably benign
R6991:Or5g23	UTSW	2	85,438,592 (GRCm39)	missense	possibly damaging	0.76
R7017:Or5g23	UTSW	2	85,438,673 (GRCm39)	missense	probably benign
R7020:Or5g23	UTSW	2	85,438,976 (GRCm39)	missense	probably benign	0.11
R7352:Or5g23	UTSW	2	85,439,128 (GRCm39)	missense	probably damaging	1.00
R7392:Or5g23	UTSW	2	85,438,832 (GRCm39)	missense	possibly damaging	0.61
R7586:Or5g23	UTSW	2	85,438,528 (GRCm39)	missense	probably damaging	0.99
R7727:Or5g23	UTSW	2	85,438,751 (GRCm39)	missense	possibly damaging	0.72
R8108:Or5g23	UTSW	2	85,439,093 (GRCm39)	missense	possibly damaging	0.94
R9332:Or5g23	UTSW	2	85,438,331 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- ATCTACAAAGGACAGTTGGCTGAG -3'
(R):5'- GAAGAGAGTTCAGATTCCAAAGATC -3'

Sequencing Primer
(F):5'- TGAGAGTGATCATCCCCA -3'
(R):5'- GTGTAAATTGCTGAAGTCAACATAGG -3'

Posted On

2020-01-23