Mutagenetix > Incidental Mutation

Incidental Mutation 'R8073:Or9s13'

620317

Institutional Source

Beutler Lab

Gene Symbol

Or9s13

Ensembl Gene

ENSMUSG00000061616

Gene Name

olfactory receptor family 9 subfamily S member 13

Synonyms

GA_x6K02T2R7CC-81134096-81133095, Olfr12, MOR208-5

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.066) question?

Stock #

R8073 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

92547603-92548723 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 92547806 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 59 (D59E)

Ref Sequence

ENSEMBL: ENSMUSP00000150858 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000081274] [ENSMUST00000213247]

AlphaFold

Q60894

Predicted Effect

probably damaging
Transcript: ENSMUST00000081274
AA Change: D59E

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000080027
Gene: ENSMUSG00000061616
AA Change: D59E

Domain	Start	End	E-Value	Type
transmembrane domain	13	30	N/A	INTRINSIC
Pfam:7tm_4	38	314	8e-53	PFAM
Pfam:7tm_1	48	297	1.3e-17	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000213247
AA Change: D59E

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.2%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ago1	C	T	4: 126,337,019 (GRCm39)	V533I	probably benign	Het
Akap3	A	T	6: 126,842,736 (GRCm39)	T452S	probably damaging	Het
Angpt1	C	T	15: 42,301,699 (GRCm39)	M436I	probably benign	Het
B3galt4	T	C	17: 34,169,797 (GRCm39)	K147R	probably damaging	Het
Birc6	C	A	17: 74,910,080 (GRCm39)	T1491K	probably damaging	Het
Boll	T	C	1: 55,394,881 (GRCm39)		probably benign	Het
C6	T	C	15: 4,764,675 (GRCm39)	F124L	probably benign	Het
Camta1	T	C	4: 151,163,281 (GRCm39)	Y436C	probably damaging	Het
Celsr1	T	C	15: 85,823,356 (GRCm39)	N1684S	probably benign	Het
Cflar	T	C	1: 58,791,981 (GRCm39)	L428P		Het
Clk4	T	C	11: 51,168,716 (GRCm39)	I363T	probably benign	Het
Cnst	A	G	1: 179,434,002 (GRCm39)	T273A	probably benign	Het
Col5a1	C	T	2: 27,852,141 (GRCm39)	A546V	possibly damaging	Het
Col6a6	T	A	9: 105,659,146 (GRCm39)	N600Y	probably benign	Het
Cxadr	A	G	16: 78,130,301 (GRCm39)	N156S	probably benign	Het
Diaph1	C	T	18: 38,024,850 (GRCm39)	G537E	unknown	Het
Dmxl1	T	A	18: 50,011,500 (GRCm39)	V1219D	probably damaging	Het
Dnajb12	T	A	10: 59,726,001 (GRCm39)	Y95*	probably null	Het
Dnajc5g	A	G	5: 31,269,029 (GRCm39)	T137A	probably benign	Het
Dpy19l3	G	A	7: 35,429,173 (GRCm39)	T89M	probably damaging	Het
Dusp19	C	A	2: 80,447,828 (GRCm39)	T34N	probably benign	Het
Eln	CTCCAGCTCCGAT	C	5: 134,758,003 (GRCm39)		probably benign	Het
Enpp1	A	G	10: 24,555,142 (GRCm39)	V68A	possibly damaging	Het
Epha7	T	A	4: 28,821,022 (GRCm39)	D62E	probably damaging	Het
Frmd4b	A	T	6: 97,283,674 (GRCm39)	V445E	probably benign	Het
Gp9	A	C	6: 87,756,336 (GRCm39)	D117A	probably benign	Het
Haao	T	C	17: 84,142,649 (GRCm39)	E152G	possibly damaging	Het
Ift70a2	A	G	2: 75,806,997 (GRCm39)	V505A	probably damaging	Het
Ighd	A	G	12: 113,379,789 (GRCm39)	S52P	probably benign	Het
Ikzf3	T	C	11: 98,358,255 (GRCm39)	K361E	probably benign	Het
Lgi2	T	A	5: 52,704,013 (GRCm39)	E206V	probably benign	Het
Mfsd11	T	A	11: 116,754,749 (GRCm39)	V220E	probably benign	Het
Moxd1	G	T	10: 24,128,848 (GRCm39)	G200C	probably damaging	Het
Mthfd1l	C	A	10: 3,923,417 (GRCm39)	Q55K	probably benign	Het
Nlrp9a	T	A	7: 26,260,260 (GRCm39)	L672M	probably damaging	Het
Npvf	A	C	6: 50,631,349 (GRCm39)	F9V	probably damaging	Het
Nup205	G	T	6: 35,179,104 (GRCm39)		probably null	Het
Nup43	T	C	10: 7,546,713 (GRCm39)	V111A	probably benign	Het
Obscn	C	T	11: 59,026,516 (GRCm39)	R229H	probably benign	Het
Olfml2a	C	A	2: 38,847,766 (GRCm39)	R442S	probably damaging	Het
Or10j2	A	G	1: 173,098,552 (GRCm39)	D270G	probably benign	Het
Or2ag16	C	A	7: 106,352,008 (GRCm39)	E196*	probably null	Het
Or4c120	T	A	2: 89,001,284 (GRCm39)	I91F	probably damaging	Het
Or5b12b	T	A	19: 12,861,980 (GRCm39)	V245E	probably benign	Het
Pcdhga7	T	C	18: 37,848,398 (GRCm39)	F135S	probably damaging	Het
Pde4a	A	T	9: 21,122,065 (GRCm39)	I654F	probably damaging	Het
Pip5kl1	G	A	2: 32,473,440 (GRCm39)	R359Q	possibly damaging	Het
Ppp2ca	T	C	11: 52,010,124 (GRCm39)	V244A	possibly damaging	Het
Qrich1	T	A	9: 108,411,627 (GRCm39)	L384H	possibly damaging	Het
Rab4a	T	C	8: 124,554,135 (GRCm39)	V62A	possibly damaging	Het
Ranbp10	A	G	8: 106,513,261 (GRCm39)	L217P	probably damaging	Het
Rhebl1	C	T	15: 98,776,405 (GRCm39)	A131T	probably benign	Het
Rnf150	A	T	8: 83,590,546 (GRCm39)		probably benign	Het
Slc32a1	G	A	2: 158,456,685 (GRCm39)	A447T	probably damaging	Het
Spag5	T	A	11: 78,192,803 (GRCm39)	M45K	probably benign	Het
Spata13	A	G	14: 60,928,705 (GRCm39)	N88D	probably damaging	Het
Spred2	C	A	11: 19,958,422 (GRCm39)	T128N	probably benign	Het
Tenm2	T	C	11: 36,030,471 (GRCm39)	E776G	possibly damaging	Het
Tet1	C	G	10: 62,649,132 (GRCm39)	E156Q	probably damaging	Het
Tmc1	T	C	19: 20,845,725 (GRCm39)	N166S	probably benign	Het
Trim43a	C	A	9: 88,464,490 (GRCm39)	Q134K	possibly damaging	Het
Tsks	A	T	7: 44,607,305 (GRCm39)	M543L	probably benign	Het
Ttn	T	C	2: 76,574,181 (GRCm39)	K25571E	probably damaging	Het
Vamp5	C	A	6: 72,357,436 (GRCm39)		probably benign	Het
Vmn2r79	A	T	7: 86,651,462 (GRCm39)	Q287L	probably benign	Het
Zfp326	T	A	5: 106,062,682 (GRCm39)	V517E	unknown	Het
Zfp467	A	T	6: 48,414,959 (GRCm39)	H564Q	probably damaging	Het
Zfp51	G	A	17: 21,684,294 (GRCm39)	C303Y	probably damaging	Het

Other mutations in Or9s13

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01085:Or9s13	APN	1	92,547,921 (GRCm39)	missense	possibly damaging	0.88
IGL01309:Or9s13	APN	1	92,548,057 (GRCm39)	missense	probably damaging	1.00
IGL02025:Or9s13	APN	1	92,548,269 (GRCm39)	missense	probably benign	0.00
IGL02517:Or9s13	APN	1	92,548,183 (GRCm39)	missense	probably benign
IGL02837:Or9s13	UTSW	1	92,548,404 (GRCm39)	missense	possibly damaging	0.73
R1394:Or9s13	UTSW	1	92,548,267 (GRCm39)	missense	probably benign	0.02
R1395:Or9s13	UTSW	1	92,548,267 (GRCm39)	missense	probably benign	0.02
R1590:Or9s13	UTSW	1	92,548,467 (GRCm39)	missense	possibly damaging	0.64
R1778:Or9s13	UTSW	1	92,548,342 (GRCm39)	missense	possibly damaging	0.94
R1924:Or9s13	UTSW	1	92,548,525 (GRCm39)	missense	probably damaging	1.00
R2011:Or9s13	UTSW	1	92,548,471 (GRCm39)	missense	probably benign	0.01
R3877:Or9s13	UTSW	1	92,547,805 (GRCm39)	missense	probably damaging	1.00
R5286:Or9s13	UTSW	1	92,548,084 (GRCm39)	missense	probably benign	0.38
R5513:Or9s13	UTSW	1	92,548,102 (GRCm39)	missense	probably benign
R5727:Or9s13	UTSW	1	92,547,900 (GRCm39)	missense	probably benign	0.00
R5905:Or9s13	UTSW	1	92,547,864 (GRCm39)	missense	possibly damaging	0.49
R5921:Or9s13	UTSW	1	92,548,344 (GRCm39)	missense	probably benign	0.01
R7614:Or9s13	UTSW	1	92,548,183 (GRCm39)	missense	probably damaging	0.99
R7959:Or9s13	UTSW	1	92,548,029 (GRCm39)	missense	probably damaging	0.96
R8161:Or9s13	UTSW	1	92,548,078 (GRCm39)	missense	probably benign	0.00
R8680:Or9s13	UTSW	1	92,547,643 (GRCm39)	missense	probably benign	0.10

Predicted Primers

PCR Primer
(F):5'- CTGCATCAGTGAGATCTCCTC -3'
(R):5'- CTCAGTGGTAGCCAACAAGG -3'

Sequencing Primer
(F):5'- CACTCATGGCCACAGCAGTG -3'
(R):5'- CTCAGTGGTAGCCAACAAGGAAAAG -3'

Posted On

2020-01-23