Incidental Mutation 'R8086:Rnf24'
ID 629637
Institutional Source Beutler Lab
Gene Symbol Rnf24
Ensembl Gene ENSMUSG00000048911
Gene Name ring finger protein 24
Synonyms 2810473M14Rik, D2Ertd504e, 4930505A13Rik, C86507
MMRRC Submission 067519-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R8086 (G1)
Quality Score 215.009
Status Validated
Chromosome 2
Chromosomal Location 131139984-131194766 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 131145468 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 114 (V114A)
Ref Sequence ENSEMBL: ENSMUSP00000058630 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000059372] [ENSMUST00000110194] [ENSMUST00000150843] [ENSMUST00000165420] [ENSMUST00000183902] [ENSMUST00000184932]
AlphaFold Q8BGI1
Predicted Effect probably benign
Transcript: ENSMUST00000059372
AA Change: V114A

PolyPhen 2 Score 0.226 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000058630
Gene: ENSMUSG00000048911
AA Change: V114A

DomainStartEndE-ValueType
transmembrane domain 24 46 N/A INTRINSIC
RING 78 118 2.71e-6 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000110194
AA Change: V114A

PolyPhen 2 Score 0.226 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000105823
Gene: ENSMUSG00000048911
AA Change: V114A

DomainStartEndE-ValueType
transmembrane domain 24 46 N/A INTRINSIC
RING 78 118 2.71e-6 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000150843
SMART Domains Protein: ENSMUSP00000119606
Gene: ENSMUSG00000037514

DomainStartEndE-ValueType
low complexity region 11 27 N/A INTRINSIC
low complexity region 28 54 N/A INTRINSIC
Pfam:Fumble 86 438 8.8e-119 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000165420
AA Change: V114A

PolyPhen 2 Score 0.226 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000129843
Gene: ENSMUSG00000048911
AA Change: V114A

DomainStartEndE-ValueType
transmembrane domain 24 46 N/A INTRINSIC
RING 78 118 2.71e-6 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000183902
SMART Domains Protein: ENSMUSP00000139130
Gene: ENSMUSG00000048911

DomainStartEndE-ValueType
transmembrane domain 24 46 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000184932
SMART Domains Protein: ENSMUSP00000139259
Gene: ENSMUSG00000037514

DomainStartEndE-ValueType
low complexity region 11 27 N/A INTRINSIC
low complexity region 28 54 N/A INTRINSIC
Pfam:Fumble 85 151 1e-12 PFAM
Coding Region Coverage
  • 1x: 99.8%
  • 3x: 99.7%
  • 10x: 98.9%
  • 20x: 96.4%
Validation Efficiency 98% (51/52)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an integral membrane protein that contains a RING-type zinc finger. The encoded protein may interact with multiple transient receptor potential cation channel subfamily C (TRPC) proteins and regulate the trafficking and insertion of these proteins into the plasma membrane. [provided by RefSeq, Mar 2016]
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2010315B03Rik T A 9: 124,055,808 (GRCm39) H372L Het
Abcb1a A T 5: 8,724,833 (GRCm39) T89S probably benign Het
Ago1 A G 4: 126,354,774 (GRCm39) V146A probably benign Het
App T C 16: 84,917,428 (GRCm39) Y72C unknown Het
Arhgap20 T C 9: 51,760,563 (GRCm39) S805P probably benign Het
Bak1 T A 17: 27,239,911 (GRCm39) R208S probably benign Het
Btnl4 A C 17: 34,692,976 (GRCm39) probably null Het
Cacng7 T C 7: 3,387,518 (GRCm39) S134P probably benign Het
Capn9 A T 8: 125,334,692 (GRCm39) probably null Het
Cox4i1 T A 8: 121,400,779 (GRCm39) M148K probably damaging Het
Ctnna1 A G 18: 35,285,713 (GRCm39) I20V possibly damaging Het
Dennd2c T A 3: 103,040,661 (GRCm39) Y309N possibly damaging Het
Dnah14 C A 1: 181,593,797 (GRCm39) T3380K probably damaging Het
Dnajc3 G T 14: 119,208,192 (GRCm39) E276* probably null Het
Dock10 C A 1: 80,481,707 (GRCm39) C1772F probably benign Het
Fank1 A T 7: 133,454,959 (GRCm39) E26D possibly damaging Het
Fcgbp G T 7: 27,813,389 (GRCm39) C2308F probably damaging Het
Fyco1 A T 9: 123,659,471 (GRCm39) M235K probably damaging Het
Gm7361 C T 5: 26,465,446 (GRCm39) R148C probably damaging Het
Hinfp C T 9: 44,210,286 (GRCm39) R183Q probably damaging Het
Hpd T C 5: 123,314,252 (GRCm39) Y221C probably benign Het
Hrnr A T 3: 93,230,728 (GRCm39) H322L unknown Het
Il6st T A 13: 112,631,094 (GRCm39) probably null Het
Impa1 T C 3: 10,387,988 (GRCm39) K145E probably benign Het
Itga9 A T 9: 118,679,869 (GRCm39) M847L probably benign Het
Itgb6 A G 2: 60,480,376 (GRCm39) V320A probably damaging Het
Lrrfip1 T A 1: 91,043,630 (GRCm39) H678Q probably benign Het
Mettl16 A G 11: 74,696,091 (GRCm39) T311A probably benign Het
Nefl T C 14: 68,323,480 (GRCm39) Y369H probably damaging Het
Or1d2 C A 11: 74,255,780 (GRCm39) P95Q probably benign Het
Pkd1 A G 17: 24,800,188 (GRCm39) Y2983C probably damaging Het
Potegl A G 2: 23,130,934 (GRCm39) probably null Het
Prr5l C T 2: 101,571,709 (GRCm39) E123K probably benign Het
Ptprq A T 10: 107,482,500 (GRCm39) Y1024* probably null Het
Ramp2 T A 11: 101,138,762 (GRCm39) L147Q probably damaging Het
Rassf1 C T 9: 107,435,173 (GRCm39) R223C probably benign Het
Rcbtb2 T C 14: 73,411,305 (GRCm39) F357L probably damaging Het
Slc7a1 T G 5: 148,288,899 (GRCm39) N116T probably damaging Het
Sstr2 T C 11: 113,515,998 (GRCm39) C306R probably damaging Het
Tatdn2 T C 6: 113,686,482 (GRCm39) S697P probably damaging Het
Tmem67 T A 4: 12,040,738 (GRCm39) N935I probably damaging Het
Trp73 G A 4: 154,201,052 (GRCm39) P4S unknown Het
Vmn1r237 T G 17: 21,534,509 (GRCm39) D77E possibly damaging Het
Vmn1r238 C T 18: 3,123,250 (GRCm39) A55T probably damaging Het
Vsig10l C A 7: 43,114,876 (GRCm39) A359E possibly damaging Het
Wdr24 T C 17: 26,045,101 (GRCm39) Y279H probably damaging Het
Zbtb25 A G 12: 76,395,923 (GRCm39) V433A probably benign Het
Zfp180 C A 7: 23,805,535 (GRCm39) D651E probably benign Het
Zfp979 T C 4: 147,698,004 (GRCm39) D235G probably damaging Het
Other mutations in Rnf24
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00719:Rnf24 APN 2 131,147,613 (GRCm39) missense possibly damaging 0.46
R5888:Rnf24 UTSW 2 131,164,165 (GRCm39) intron probably benign
R7444:Rnf24 UTSW 2 131,155,215 (GRCm39) missense probably damaging 1.00
R7661:Rnf24 UTSW 2 131,164,135 (GRCm39) intron probably benign
R7737:Rnf24 UTSW 2 131,145,416 (GRCm39) missense probably benign
R8992:Rnf24 UTSW 2 131,155,197 (GRCm39) missense possibly damaging 0.81
Predicted Primers PCR Primer
(F):5'- AAACGGAGTCTGCTTGTGTTC -3'
(R):5'- TGGTACCTTCACATCAGCCTG -3'

Sequencing Primer
(F):5'- CCTCCTGGCTCCATACTGATGTG -3'
(R):5'- CTTCACATCAGCCTGTAGGAGATAG -3'
Posted On 2020-06-30