Mutagenetix > Incidental Mutation

Incidental Mutation 'R8108:Ccdc7a'

630735

Institutional Source

Beutler Lab

Gene Symbol

Ccdc7a

Ensembl Gene

ENSMUSG00000025808

Gene Name

coiled-coil domain containing 7A

Synonyms

Ccdc7, 4930517G15Rik, 4930540C21Rik

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.051) question?

Stock #

R8108 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

128734235-129065517 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 128980153 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 332 (T332A)

Ref Sequence

ENSEMBL: ENSMUSP00000092780 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000095158] [ENSMUST00000125112] [ENSMUST00000214889]

AlphaFold

Q9D541

Predicted Effect

unknown
Transcript: ENSMUST00000095158
AA Change: T332A

SMART Domains

Protein: ENSMUSP00000092780
Gene: ENSMUSG00000025808
AA Change: T332A

Domain	Start	End	E-Value	Type
Pfam:BioT2	1	166	3e-79	PFAM
SCOP:d1sig__	191	370	1e-5	SMART

Predicted Effect

unknown
Transcript: ENSMUST00000125112
AA Change: T332A

SMART Domains

Protein: ENSMUSP00000117961
Gene: ENSMUSG00000025808
AA Change: T332A

Domain	Start	End	E-Value	Type
Pfam:BioT2	1	166	4.3e-83	PFAM
SCOP:d1sig__	191	333	9e-5	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000214889
AA Change: T332A

PolyPhen 2 Score 0.947 (Sensitivity: 0.79; Specificity: 0.95)

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 99.0%
20x: 97.3%

Validation Efficiency

99% (72/73)

Allele List at MGI

Other mutations in this stock

Total: 73 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acot1	T	A	12: 84,017,361	H414Q	probably benign	Het
Actrt2	A	T	4: 154,667,036	D214E	probably benign	Het
Chd9	C	T	8: 90,933,224	H271Y	unknown	Het
Depdc5	T	G	5: 32,945,049	D966E	probably benign	Het
Dolpp1	A	G	2: 30,396,246	Y119C	probably benign	Het
Dscam	G	C	16: 96,643,879	D1537E	probably benign	Het
Dusp16	A	G	6: 134,739,873	I157T	probably benign	Het
Dyrk2	T	C	10: 118,859,829	D508G	probably benign	Het
Endov	T	C	11: 119,507,411	V334A	probably benign	Het
Ep400	A	T	5: 110,687,883	V1956E	unknown	Het
Erich3	A	T	3: 154,720,115	Y83F	possibly damaging	Het
Fbrsl1	T	C	5: 110,378,379		probably null	Het
Gm1110	T	C	9: 26,920,661	I65V	probably damaging	Het
Gm28374	A	G	19: 6,082,200	V19A		Het
Gm436	A	T	4: 144,670,669	N164K	probably benign	Het
Gpr107	C	A	2: 31,184,869	H336Q	probably damaging	Het
Gpr137b	T	C	13: 13,359,406	Y355C		Het
Grm1	C	A	10: 10,720,132	R584L	probably benign	Het
Gse1	T	C	8: 120,229,810	S347P	unknown	Het
Ier3ip1	T	A	18: 76,940,525	I69K	possibly damaging	Het
Impact	T	G	18: 12,984,331	L154V	probably benign	Het
Katnb1	T	C	8: 95,093,945	F141S	possibly damaging	Het
Kifap3	T	A	1: 163,797,362	N162K	probably damaging	Het
Klhl5	A	G	5: 65,148,587		probably null	Het
Klre1	A	G	6: 129,584,222	D182G	probably benign	Het
Krt42	T	A	11: 100,266,957	Y227F	probably benign	Het
Lhcgr	T	A	17: 88,742,050	K683*	probably null	Het
Lrrc37a	G	A	11: 103,503,057	S514F	probably benign	Het
Lrrc9	G	T	12: 72,454,059	L186F	probably damaging	Het
Metrn	A	G	17: 25,795,030	V274A	probably benign	Het
Mettl25	A	T	10: 105,823,179	F414L	possibly damaging	Het
Mixl1	A	G	1: 180,696,702	V104A	probably damaging	Het
Myo9b	T	A	8: 71,348,342	M1047K	probably damaging	Het
Nbea	G	A	3: 55,819,315	A2081V	probably benign	Het
Ndufs1	A	T	1: 63,150,012	D551E	possibly damaging	Het
Nectin3	T	C	16: 46,464,121	T67A	possibly damaging	Het
Nme8	C	T	13: 19,650,960	V519I	probably benign	Het
Npat	G	T	9: 53,571,129	G1379V	probably benign	Het
Obscn	T	A	11: 59,061,634	T3870S	probably benign	Het
Olfr1000	T	C	2: 85,608,749	R54G	possibly damaging	Het
Olfr1288	T	C	2: 111,479,234	V150A	possibly damaging	Het
Olfr177	T	C	16: 58,872,236	M305V	probably benign	Het
Olfr379-ps1	T	A	11: 73,433,854	H124L	unknown	Het
Olfr871	T	A	9: 20,212,451	M34K	possibly damaging	Het
Olfr910	A	G	9: 38,539,410	N172D	probably damaging	Het
Parp8	A	T	13: 116,867,073	Y769*	probably null	Het
Pcnx	C	T	12: 81,918,819	R59*	probably null	Het
Pdzd2	G	A	15: 12,373,506	S2181L	probably benign	Het
Phldb1	T	C	9: 44,711,161	E65G	probably damaging	Het
Ppif	C	T	14: 25,698,326	T157M	probably damaging	Het
Ppp3ca	T	A	3: 136,932,225		probably null	Het
Proser1	T	A	3: 53,472,088		probably null	Het
Reg3d	T	A	6: 78,376,079	K174*	probably null	Het
Rubcn	A	T	16: 32,856,950	L55Q	probably damaging	Het
Sec14l3	T	C	11: 4,066,198	L39P	probably damaging	Het
Ska3	A	G	14: 57,826,102	I4T	probably damaging	Het
Slc30a10	A	G	1: 185,464,154	I338V	possibly damaging	Het
Slc35g1	C	G	19: 38,402,829	S186R	probably damaging	Het
Slc35g1	T	A	19: 38,402,831	L187H	probably damaging	Het
Spata5	T	C	3: 37,431,782	S218P	probably benign	Het
Tbc1d5	T	C	17: 50,742,086	I659V	probably benign	Het
Tbl3	G	T	17: 24,700,916	D751E	probably benign	Het
Tdrd3	T	A	14: 87,486,266	D311E	possibly damaging	Het
Tenm4	T	C	7: 96,854,728	F1335S	probably benign	Het
Tm2d1	A	T	4: 98,375,023	C83S	probably damaging	Het
Tnfrsf22	A	T	7: 143,638,373	V192D	unknown	Het
Trpm6	A	G	19: 18,811,790	T575A	probably damaging	Het
Uri1	T	C	7: 37,981,673	D102G	possibly damaging	Het
Vmn2r1	T	A	3: 64,103,050	C570S	probably damaging	Het
Vps13a	C	T	19: 16,640,787	V2906I	probably damaging	Het
Zfp472	T	C	17: 32,978,003	Y351H	possibly damaging	Het
Zfp874a	G	T	13: 67,443,234	Y110*	probably null	Het
Zfp986	T	A	4: 145,899,305	N178K	probably benign	Het

Other mutations in Ccdc7a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00491:Ccdc7a	APN	8	129026754	splice site	probably benign
IGL01019:Ccdc7a	APN	8	129061618	missense	probably benign	0.05
IGL01553:Ccdc7a	APN	8	129026591	splice site	probably benign
IGL01577:Ccdc7a	APN	8	128988763	missense	probably damaging	0.96
IGL03114:Ccdc7a	APN	8	129026689	missense	possibly damaging	0.62
IGL03323:Ccdc7a	APN	8	129058763	missense	probably benign	0.02
R1517:Ccdc7a	UTSW	8	129061681	missense	probably damaging	0.99
R1804:Ccdc7a	UTSW	8	128988766	nonsense	probably null
R1957:Ccdc7a	UTSW	8	128980135	missense	probably damaging	0.99
R4926:Ccdc7a	UTSW	8	128980054	intron	probably benign
R4981:Ccdc7a	UTSW	8	128984983	missense	probably benign	0.35
R5193:Ccdc7a	UTSW	8	128988797	missense	probably benign	0.02
R5273:Ccdc7a	UTSW	8	129061609	frame shift	probably null
R5486:Ccdc7a	UTSW	8	128985403	missense	probably damaging	0.98
R5505:Ccdc7a	UTSW	8	128980174	missense	possibly damaging	0.73
R5562:Ccdc7a	UTSW	8	129058785	missense	possibly damaging	0.79
R5704:Ccdc7a	UTSW	8	128980096	splice site	probably benign
R6256:Ccdc7a	UTSW	8	128935593	splice site	probably null
R6273:Ccdc7a	UTSW	8	128787338	missense	probably damaging	0.97
R6366:Ccdc7a	UTSW	8	128855992	missense	unknown
R6455:Ccdc7a	UTSW	8	128832610	missense	probably damaging	0.97
R6778:Ccdc7a	UTSW	8	128821120	missense	possibly damaging	0.66
R6882:Ccdc7a	UTSW	8	128797328	intron	probably benign
R6891:Ccdc7a	UTSW	8	129026638	missense	probably damaging	1.00
R6906:Ccdc7a	UTSW	8	128935681	missense	unknown
R7028:Ccdc7a	UTSW	8	128881594	missense	unknown
R7046:Ccdc7a	UTSW	8	129047619	missense	probably damaging	0.99
R7073:Ccdc7a	UTSW	8	128892385	missense	possibly damaging	0.46
R7268:Ccdc7a	UTSW	8	128881152	missense	possibly damaging	0.66
R7454:Ccdc7a	UTSW	8	128944516	missense	unknown
R7643:Ccdc7a	UTSW	8	128889811	missense	probably damaging	1.00
R7733:Ccdc7a	UTSW	8	128993052	missense	probably damaging	1.00
R7792:Ccdc7a	UTSW	8	128892437	missense	possibly damaging	0.81
R7902:Ccdc7a	UTSW	8	128836173	missense	possibly damaging	0.46
R7946:Ccdc7a	UTSW	8	128917146	missense	probably damaging	0.97
R7983:Ccdc7a	UTSW	8	128881078	missense	possibly damaging	0.66
R8032:Ccdc7a	UTSW	8	128825383	missense	unknown
R8345:Ccdc7a	UTSW	8	128798764	missense	probably benign	0.01
R8372:Ccdc7a	UTSW	8	128821104	missense	possibly damaging	0.82
R8379:Ccdc7a	UTSW	8	128964936	missense	probably benign	0.03
R8472:Ccdc7a	UTSW	8	129027657	missense	probably damaging	0.99
R8478:Ccdc7a	UTSW	8	128761369	missense	possibly damaging	0.66
R8536:Ccdc7a	UTSW	8	128790120	missense	possibly damaging	0.66
R8671:Ccdc7a	UTSW	8	128920467	missense	probably damaging	0.99
R8696:Ccdc7a	UTSW	8	128988763	missense	probably damaging	0.96
R8813:Ccdc7a	UTSW	8	128823461	missense	possibly damaging	0.83
R8859:Ccdc7a	UTSW	8	129061632	missense	probably benign	0.44
R9208:Ccdc7a	UTSW	8	128746001	missense	possibly damaging	0.66
R9222:Ccdc7a	UTSW	8	128799129	missense	unknown
R9262:Ccdc7a	UTSW	8	128759796	missense	possibly damaging	0.66
R9299:Ccdc7a	UTSW	8	128889838	missense	probably benign	0.27
R9337:Ccdc7a	UTSW	8	128889838	missense	probably benign	0.27
R9357:Ccdc7a	UTSW	8	128944655	critical splice acceptor site	probably null
R9516:Ccdc7a	UTSW	8	128829293	missense	unknown
R9579:Ccdc7a	UTSW	8	129047653	nonsense	probably null
R9672:Ccdc7a	UTSW	8	128944535	missense	unknown
R9777:Ccdc7a	UTSW	8	128892379	missense	possibly damaging	0.90
RF008:Ccdc7a	UTSW	8	128964953	missense	probably damaging	0.99
Z1176:Ccdc7a	UTSW	8	129026663	missense	probably benign	0.41
Z1177:Ccdc7a	UTSW	8	128807924	missense	possibly damaging	0.66
Z1190:Ccdc7a	UTSW	8	128819895	missense	possibly damaging	0.66

Predicted Primers

PCR Primer
(F):5'- AAACCCCTTACCTCTTGCAG -3'
(R):5'- GTGCAAGTACTCCCCACTTAAG -3'

Sequencing Primer
(F):5'- ACTCACCATTTCTAATCCTGTAACAG -3'
(R):5'- GTACTCCCCACTTAAGTACAAATAGG -3'

Posted On

2020-06-30