Mutagenetix > Incidental Mutation

Incidental Mutation 'R8135:Nhsl1'

632222

Institutional Source

Beutler Lab

Gene Symbol

Nhsl1

Ensembl Gene

ENSMUSG00000039835

Gene Name

NHS like 1

Synonyms

A630035H13Rik, 5730409E15Rik, D10Bwg0940e

MMRRC Submission

067563-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8135 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

18194733-18409640 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 18407180 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 1438 (D1438G)

Ref Sequence

ENSEMBL: ENSMUSP00000147021 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037341] [ENSMUST00000100054] [ENSMUST00000207038]

AlphaFold

Q8CAF4

Predicted Effect

probably damaging
Transcript: ENSMUST00000037341
AA Change: D1408G

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000040799
Gene: ENSMUSG00000039835
AA Change: D1408G

Domain	Start	End	E-Value	Type
Pfam:NHS	258	906	1.6e-246	PFAM
low complexity region	918	938	N/A	INTRINSIC
low complexity region	942	950	N/A	INTRINSIC
low complexity region	958	970	N/A	INTRINSIC
low complexity region	992	1024	N/A	INTRINSIC
low complexity region	1171	1197	N/A	INTRINSIC
low complexity region	1373	1385	N/A	INTRINSIC
low complexity region	1442	1460	N/A	INTRINSIC
low complexity region	1484	1503	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000100054
AA Change: D1404G

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000097631
Gene: ENSMUSG00000039835
AA Change: D1404G

Domain	Start	End	E-Value	Type
low complexity region	8	19	N/A	INTRINSIC
low complexity region	197	207	N/A	INTRINSIC
Pfam:NHS	253	902	7.3e-250	PFAM
low complexity region	914	934	N/A	INTRINSIC
low complexity region	938	946	N/A	INTRINSIC
low complexity region	954	966	N/A	INTRINSIC
low complexity region	988	1020	N/A	INTRINSIC
low complexity region	1167	1193	N/A	INTRINSIC
low complexity region	1369	1381	N/A	INTRINSIC
low complexity region	1438	1456	N/A	INTRINSIC
low complexity region	1480	1499	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000207038
AA Change: D1438G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Coding Region Coverage

1x: 99.8%
3x: 99.6%
10x: 98.7%
20x: 95.8%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 37 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acsl3	A	G	1: 78,674,712 (GRCm39)	I420V	probably benign	Het
Adam7	A	T	14: 68,754,022 (GRCm39)	M359K	probably damaging	Het
Adra1d	C	T	2: 131,403,692 (GRCm39)	A133T	probably damaging	Het
B3galnt2	T	A	13: 14,145,454 (GRCm39)		probably null	Het
Camk1g	A	G	1: 193,036,335 (GRCm39)	V175A	possibly damaging	Het
Cfi	A	G	3: 129,648,649 (GRCm39)	N178D	probably benign	Het
Csf2rb	T	A	15: 78,232,319 (GRCm39)	I542K	possibly damaging	Het
Ctsz	T	C	2: 174,270,946 (GRCm39)	T183A	probably benign	Het
Dhx8	A	G	11: 101,629,090 (GRCm39)	D213G	unknown	Het
Dph7	T	C	2: 24,859,556 (GRCm39)	I271T	probably benign	Het
Edem1	G	T	6: 108,806,022 (GRCm39)	E108*	probably null	Het
Enpp4	T	C	17: 44,412,226 (GRCm39)	T328A	probably benign	Het
Fasl	A	G	1: 161,614,697 (GRCm39)	V122A	probably benign	Het
Fut2	T	C	7: 45,300,566 (GRCm39)	T69A	probably damaging	Het
Gaa	T	C	11: 119,169,210 (GRCm39)		probably null	Het
Galnt5	T	A	2: 57,904,880 (GRCm39)	V481D	probably damaging	Het
Gsdma2	A	G	11: 98,542,872 (GRCm39)	I211V	probably benign	Het
H2-M10.4	T	C	17: 36,772,662 (GRCm39)	T107A	probably benign	Het
Iqcg	T	A	16: 32,849,394 (GRCm39)	K297N	probably benign	Het
Map2	A	G	1: 66,452,828 (GRCm39)	T573A	probably damaging	Het
Nipal2	A	T	15: 34,678,719 (GRCm39)	Y41N	possibly damaging	Het
Obscn	A	T	11: 58,922,703 (GRCm39)	S5878T	possibly damaging	Het
Pde6a	T	C	18: 61,418,996 (GRCm39)	F791L	probably damaging	Het
Phip	A	T	9: 82,812,427 (GRCm39)	N308K	probably benign	Het
Pigc	A	G	1: 161,798,134 (GRCm39)	K39E	possibly damaging	Het
Robo2	T	G	16: 73,730,048 (GRCm39)	I1050L	probably benign	Het
Rps2	A	G	17: 24,939,409 (GRCm39)	K54E	probably benign	Het
Set	T	A	2: 29,959,439 (GRCm39)	D137E	probably benign	Het
Sipa1l1	A	G	12: 82,388,075 (GRCm39)	I100M	probably benign	Het
Spdye4b	T	C	5: 143,180,777 (GRCm39)	V81A	probably damaging	Het
Tbc1d2	T	C	4: 46,609,071 (GRCm39)	D722G	probably benign	Het
Tecpr1	T	A	5: 144,135,420 (GRCm39)	D1011V	probably damaging	Het
Unc80	A	T	1: 66,548,446 (GRCm39)	I573F	possibly damaging	Het
Vmn1r74	T	A	7: 11,581,530 (GRCm39)	C277S	probably benign	Het
Vwa1	T	A	4: 155,857,351 (GRCm39)	D149V	probably damaging	Het
Zfp397	T	A	18: 24,089,564 (GRCm39)	V23E	probably damaging	Het
Zmynd8	T	C	2: 165,654,346 (GRCm39)	D722G	probably damaging	Het

Other mutations in Nhsl1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00230:Nhsl1	APN	10	18,403,357 (GRCm39)	missense	probably benign	0.07
IGL01121:Nhsl1	APN	10	18,387,458 (GRCm39)	missense	probably damaging	1.00
IGL01775:Nhsl1	APN	10	18,400,222 (GRCm39)	missense	probably damaging	0.99
IGL02143:Nhsl1	APN	10	18,387,383 (GRCm39)	missense	possibly damaging	0.74
IGL02606:Nhsl1	APN	10	18,387,385 (GRCm39)	missense	probably damaging	1.00
IGL02642:Nhsl1	APN	10	18,284,138 (GRCm39)	missense	possibly damaging	0.96
IGL02866:Nhsl1	APN	10	18,403,355 (GRCm39)	missense	probably damaging	0.99
IGL03263:Nhsl1	APN	10	18,373,827 (GRCm39)	nonsense	probably null
IGL03380:Nhsl1	APN	10	18,399,627 (GRCm39)	nonsense	probably null
PIT4651001:Nhsl1	UTSW	10	18,284,183 (GRCm39)	missense	probably damaging	0.98
R0046:Nhsl1	UTSW	10	18,401,417 (GRCm39)	missense	probably damaging	1.00
R0046:Nhsl1	UTSW	10	18,401,417 (GRCm39)	missense	probably damaging	1.00
R0116:Nhsl1	UTSW	10	18,400,990 (GRCm39)	nonsense	probably null
R0245:Nhsl1	UTSW	10	18,400,856 (GRCm39)	missense	probably damaging	1.00
R0254:Nhsl1	UTSW	10	18,348,733 (GRCm39)	missense	probably damaging	1.00
R0288:Nhsl1	UTSW	10	18,399,794 (GRCm39)	missense	probably damaging	1.00
R0648:Nhsl1	UTSW	10	18,407,474 (GRCm39)	missense	possibly damaging	0.92
R1055:Nhsl1	UTSW	10	18,401,223 (GRCm39)	missense	probably benign	0.08
R1300:Nhsl1	UTSW	10	18,284,209 (GRCm39)	missense	probably benign
R1384:Nhsl1	UTSW	10	18,284,261 (GRCm39)	missense	probably null	0.96
R1453:Nhsl1	UTSW	10	18,407,323 (GRCm39)	missense	probably damaging	1.00
R1523:Nhsl1	UTSW	10	18,284,103 (GRCm39)	missense	probably benign
R1595:Nhsl1	UTSW	10	18,402,096 (GRCm39)	missense	probably damaging	0.98
R1786:Nhsl1	UTSW	10	18,400,412 (GRCm39)	missense	probably benign	0.28
R1836:Nhsl1	UTSW	10	18,400,653 (GRCm39)	missense	possibly damaging	0.87
R1878:Nhsl1	UTSW	10	18,400,027 (GRCm39)	missense	probably damaging	1.00
R2013:Nhsl1	UTSW	10	18,387,340 (GRCm39)	missense	probably damaging	1.00
R2014:Nhsl1	UTSW	10	18,387,340 (GRCm39)	missense	probably damaging	1.00
R2015:Nhsl1	UTSW	10	18,387,340 (GRCm39)	missense	probably damaging	1.00
R3115:Nhsl1	UTSW	10	18,400,916 (GRCm39)	missense	probably damaging	1.00
R3116:Nhsl1	UTSW	10	18,400,916 (GRCm39)	missense	probably damaging	1.00
R3754:Nhsl1	UTSW	10	18,391,782 (GRCm39)	missense	probably damaging	0.99
R4342:Nhsl1	UTSW	10	18,402,437 (GRCm39)	missense	probably damaging	1.00
R4595:Nhsl1	UTSW	10	18,403,357 (GRCm39)	missense	probably benign	0.07
R4604:Nhsl1	UTSW	10	18,407,158 (GRCm39)	missense	probably damaging	0.99
R4666:Nhsl1	UTSW	10	18,407,153 (GRCm39)	missense	probably damaging	1.00
R5223:Nhsl1	UTSW	10	18,402,074 (GRCm39)	missense	probably damaging	1.00
R5258:Nhsl1	UTSW	10	18,400,070 (GRCm39)	nonsense	probably null
R5707:Nhsl1	UTSW	10	18,402,251 (GRCm39)	missense	probably damaging	1.00
R5796:Nhsl1	UTSW	10	18,399,998 (GRCm39)	missense	probably benign	0.06
R5960:Nhsl1	UTSW	10	18,402,724 (GRCm39)	missense	probably benign
R6190:Nhsl1	UTSW	10	18,345,789 (GRCm39)	intron	probably benign
R6272:Nhsl1	UTSW	10	18,400,253 (GRCm39)	missense	probably benign	0.01
R6677:Nhsl1	UTSW	10	18,401,610 (GRCm39)	missense	probably damaging	0.98
R6714:Nhsl1	UTSW	10	18,400,459 (GRCm39)	missense	possibly damaging	0.74
R6765:Nhsl1	UTSW	10	18,407,062 (GRCm39)	missense	probably benign	0.01
R6892:Nhsl1	UTSW	10	18,400,091 (GRCm39)	missense	probably damaging	1.00
R7049:Nhsl1	UTSW	10	18,407,386 (GRCm39)	missense	probably damaging	0.99
R7060:Nhsl1	UTSW	10	18,402,251 (GRCm39)	missense	probably damaging	1.00
R7236:Nhsl1	UTSW	10	18,401,512 (GRCm39)	missense	probably damaging	1.00
R7299:Nhsl1	UTSW	10	18,403,419 (GRCm39)	splice site	probably null
R7305:Nhsl1	UTSW	10	18,407,434 (GRCm39)	missense	possibly damaging	0.94
R7513:Nhsl1	UTSW	10	18,399,700 (GRCm39)	missense	probably damaging	1.00
R7566:Nhsl1	UTSW	10	18,391,867 (GRCm39)	missense	probably damaging	1.00
R8008:Nhsl1	UTSW	10	18,284,186 (GRCm39)	missense	probably damaging	0.96
R8240:Nhsl1	UTSW	10	18,402,487 (GRCm39)	missense	probably benign	0.34
R8391:Nhsl1	UTSW	10	18,400,691 (GRCm39)	missense	possibly damaging	0.67
R8396:Nhsl1	UTSW	10	18,400,910 (GRCm39)	missense	probably benign	0.00
R8752:Nhsl1	UTSW	10	18,407,113 (GRCm39)	missense	probably benign	0.01
R9022:Nhsl1	UTSW	10	18,403,409 (GRCm39)	missense	possibly damaging	0.74
R9087:Nhsl1	UTSW	10	18,407,030 (GRCm39)	missense	probably damaging	1.00
R9360:Nhsl1	UTSW	10	18,194,898 (GRCm39)	missense	probably damaging	1.00
R9396:Nhsl1	UTSW	10	18,399,749 (GRCm39)	missense	probably damaging	1.00
R9665:Nhsl1	UTSW	10	18,401,599 (GRCm39)	missense	possibly damaging	0.53
R9673:Nhsl1	UTSW	10	18,402,665 (GRCm39)	missense	possibly damaging	0.87
Z1177:Nhsl1	UTSW	10	18,402,337 (GRCm39)	missense	probably benign	0.05

Predicted Primers

PCR Primer
(F):5'- AAGGTTGCCAAGGACTGACTG -3'
(R):5'- ATCAGGCCTTCGTTCTTGGC -3'

Sequencing Primer
(F):5'- AAAGGAAAGTCCTTGGCC -3'
(R):5'- GGCCCACTCTTCCTGAGC -3'

Posted On

2020-06-30