Mutagenetix > Incidental Mutation

Incidental Mutation 'R8143:Ifi208'

632618

Institutional Source

Beutler Lab

Gene Symbol

Ifi208

Ensembl Gene

ENSMUSG00000066677

Gene Name

interferon activated gene 208

Synonyms

Pydc3, E430029J22Rik, Pyr-rv1

MMRRC Submission

067571-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8143 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

173501241-173525961 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 173510242 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 132 (D132E)

Ref Sequence

ENSEMBL: ENSMUSP00000083039 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000085876] [ENSMUST00000169857]

AlphaFold

Q3V3Q4

Predicted Effect

possibly damaging
Transcript: ENSMUST00000085876
AA Change: D132E

PolyPhen 2 Score 0.911 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000083039
Gene: ENSMUSG00000066677
AA Change: D132E

Domain	Start	End	E-Value	Type
PYRIN	10	88	3.23e-20	SMART
low complexity region	101	112	N/A	INTRINSIC
low complexity region	211	222	N/A	INTRINSIC
low complexity region	488	504	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000169857
AA Change: D132E

PolyPhen 2 Score 0.911 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000128958
Gene: ENSMUSG00000066677
AA Change: D132E

Domain	Start	End	E-Value	Type
PYRIN	10	88	3.23e-20	SMART
low complexity region	101	112	N/A	INTRINSIC
low complexity region	211	222	N/A	INTRINSIC
Pfam:HERV-K_REC	502	580	3.5e-9	PFAM

Coding Region Coverage

1x: 99.7%
3x: 99.4%
10x: 97.3%
20x: 85.9%

Validation Efficiency

100% (65/65)

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930402F06Rik	C	A	2: 35,265,884 (GRCm39)	C262F	probably damaging	Het
Acss1	T	C	2: 150,509,801 (GRCm39)		probably null	Het
Adamtsl1	T	C	4: 86,260,492 (GRCm39)	V909A	possibly damaging	Het
Adprh	G	A	16: 38,270,694 (GRCm39)	T37M	probably benign	Het
Ak9	T	A	10: 41,213,588 (GRCm39)	Y264*	probably null	Het
Aox3	G	T	1: 58,198,074 (GRCm39)	A629S	probably benign	Het
Apcs	G	A	1: 172,721,900 (GRCm39)	P149S	probably damaging	Het
Arnt	T	A	3: 95,377,294 (GRCm39)		probably null	Het
Asb13	G	A	13: 3,692,065 (GRCm39)	G15D	probably damaging	Het
Bltp1	T	G	3: 37,000,657 (GRCm39)		probably null	Het
Cacnb1	T	G	11: 97,894,146 (GRCm39)	T459P	probably benign	Het
Chrnb2	T	C	3: 89,654,630 (GRCm39)	T718A	unknown	Het
Cttn	T	A	7: 144,014,999 (GRCm39)	K70*	probably null	Het
Cyp2f2	G	A	7: 26,828,678 (GRCm39)	V183I	probably benign	Het
Cyp39a1	T	C	17: 44,036,517 (GRCm39)	V349A	probably benign	Het
Ebf2	C	A	14: 67,649,386 (GRCm39)	Y430*	probably null	Het
Eef2	T	C	10: 81,017,182 (GRCm39)	Y730H	probably damaging	Het
Eif2ak2	G	A	17: 79,165,961 (GRCm39)	T412I	probably benign	Het
Flnc	G	C	6: 29,441,484 (GRCm39)	R422P	probably benign	Het
Fryl	G	A	5: 73,207,682 (GRCm39)	A2496V	probably benign	Het
Galnt6	A	G	15: 100,614,088 (GRCm39)	L71P	probably damaging	Het
Gm7579	C	T	7: 141,766,163 (GRCm39)	Q190*	probably null	Het
H2-T3	T	A	17: 36,498,384 (GRCm39)	R220S	probably benign	Het
Hmcn1	A	G	1: 150,734,957 (GRCm39)	V185A	probably benign	Het
Itgb4	G	A	11: 115,884,255 (GRCm39)	V981I	probably damaging	Het
Itsn2	A	G	12: 4,683,003 (GRCm39)	T310A	unknown	Het
Kat5	A	G	19: 5,657,577 (GRCm39)		probably null	Het
Kif22	A	T	7: 126,632,397 (GRCm39)	D304E	probably damaging	Het
Mapre3	A	T	5: 31,020,719 (GRCm39)	N147Y	possibly damaging	Het
Morc2a	T	C	11: 3,628,537 (GRCm39)	V330A	probably benign	Het
Mylk	G	A	16: 34,734,525 (GRCm39)	V709M	possibly damaging	Het
Myo3a	T	G	2: 22,287,476 (GRCm39)		probably null	Het
N4bp2l2	A	T	5: 150,585,670 (GRCm39)	D103E	probably benign	Het
Nckap1	T	C	2: 80,336,530 (GRCm39)	K1062R	possibly damaging	Het
Nol9	T	C	4: 152,125,559 (GRCm39)	V170A	possibly damaging	Het
Numa1	A	G	7: 101,648,891 (GRCm39)	Q874R	possibly damaging	Het
Olig3	T	G	10: 19,232,732 (GRCm39)	V119G	probably damaging	Het
Or7g34	A	G	9: 19,478,587 (GRCm39)	V31A	probably benign	Het
Osbpl9	A	G	4: 108,922,906 (GRCm39)	S485P	probably benign	Het
Otogl	A	G	10: 107,642,527 (GRCm39)	F1301S	probably damaging	Het
Pank3	A	G	11: 35,667,036 (GRCm39)	Y51C	probably damaging	Het
Pex5l	T	C	3: 33,136,658 (GRCm39)		probably benign	Het
Pgm1	G	A	4: 99,824,415 (GRCm39)		probably null	Het
Psmd9	T	G	5: 123,366,479 (GRCm39)	I37S	probably damaging	Het
Qtrt2	A	G	16: 43,692,117 (GRCm39)	S135P	probably damaging	Het
Rexo5	T	A	7: 119,433,484 (GRCm39)		probably null	Het
Rsrp1	T	A	4: 134,654,319 (GRCm39)	D286E	probably benign	Het
Scara3	C	T	14: 66,169,269 (GRCm39)	C116Y	probably damaging	Het
Serpina3b	A	T	12: 104,096,793 (GRCm39)	T25S	probably benign	Het
Sh3pxd2a	G	A	19: 47,257,138 (GRCm39)	P555S	probably damaging	Het
Slc1a2	T	A	2: 102,568,230 (GRCm39)	L89Q	probably damaging	Het
Tgm6	T	A	2: 129,983,763 (GRCm39)	N307K	probably damaging	Het
Tmem86b	G	T	7: 4,631,484 (GRCm39)	D189E	probably damaging	Het
Trim65	G	A	11: 116,017,287 (GRCm39)	R392C	probably benign	Het
Trpc7	T	C	13: 56,930,362 (GRCm39)	T769A	probably benign	Het
Trrap	T	A	5: 144,772,707 (GRCm39)		probably null	Het
Ttn	T	C	2: 76,693,677 (GRCm39)	E397G	possibly damaging	Het
Vcl	A	T	14: 21,037,112 (GRCm39)	M237L	possibly damaging	Het
Vmn1r36	G	A	6: 66,693,036 (GRCm39)	Q280*	probably null	Het
Vmn2r23	A	T	6: 123,718,312 (GRCm39)	D555V	probably damaging	Het
Wnk4	A	G	11: 101,153,625 (GRCm39)	N229S	probably damaging	Het
Zfp784	A	C	7: 5,038,910 (GRCm39)	V216G	possibly damaging	Het

Other mutations in Ifi208

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00093:Ifi208	APN	1	173,506,604 (GRCm39)	critical splice donor site	probably null
IGL00725:Ifi208	APN	1	173,510,427 (GRCm39)	missense	possibly damaging	0.86
IGL01952:Ifi208	APN	1	173,506,597 (GRCm39)	missense	possibly damaging	0.93
IGL02024:Ifi208	APN	1	173,510,856 (GRCm39)	missense	probably damaging	0.99
IGL02637:Ifi208	APN	1	173,506,508 (GRCm39)	missense	probably benign	0.15
IGL02829:Ifi208	APN	1	173,510,406 (GRCm39)	missense	probably damaging	0.99
IGL03216:Ifi208	APN	1	173,506,507 (GRCm39)	missense	possibly damaging	0.68
IGL03398:Ifi208	APN	1	173,510,817 (GRCm39)	missense	probably damaging	0.96
FR4304:Ifi208	UTSW	1	173,505,264 (GRCm39)	small deletion	probably benign
FR4340:Ifi208	UTSW	1	173,505,264 (GRCm39)	small deletion	probably benign
FR4342:Ifi208	UTSW	1	173,505,264 (GRCm39)	small deletion	probably benign
R0022:Ifi208	UTSW	1	173,510,612 (GRCm39)	missense	possibly damaging	0.91
R0468:Ifi208	UTSW	1	173,511,047 (GRCm39)	missense	probably benign	0.08
R0734:Ifi208	UTSW	1	173,510,901 (GRCm39)	missense	probably damaging	0.98
R0780:Ifi208	UTSW	1	173,510,262 (GRCm39)	missense	probably benign	0.06
R1070:Ifi208	UTSW	1	173,510,610 (GRCm39)	missense	probably damaging	0.99
R1339:Ifi208	UTSW	1	173,510,804 (GRCm39)	missense	probably damaging	0.99
R1473:Ifi208	UTSW	1	173,523,220 (GRCm39)	missense	possibly damaging	0.53
R1755:Ifi208	UTSW	1	173,505,476 (GRCm39)	missense	possibly damaging	0.86
R3012:Ifi208	UTSW	1	173,523,136 (GRCm39)	critical splice acceptor site	probably null
R3692:Ifi208	UTSW	1	173,510,438 (GRCm39)	missense	possibly damaging	0.93
R4175:Ifi208	UTSW	1	173,510,267 (GRCm39)	missense	probably benign	0.01
R4235:Ifi208	UTSW	1	173,510,477 (GRCm39)	missense	probably benign	0.06
R4749:Ifi208	UTSW	1	173,523,180 (GRCm39)	missense	possibly damaging	0.70
R4815:Ifi208	UTSW	1	173,510,403 (GRCm39)	missense	probably damaging	0.96
R5116:Ifi208	UTSW	1	173,505,549 (GRCm39)	intron	probably benign
R5138:Ifi208	UTSW	1	173,518,239 (GRCm39)	missense	probably null	0.29
R5210:Ifi208	UTSW	1	173,510,831 (GRCm39)	missense	probably benign
R5304:Ifi208	UTSW	1	173,511,174 (GRCm39)	missense	probably benign
R6126:Ifi208	UTSW	1	173,505,274 (GRCm39)	missense	possibly damaging	0.91
R6558:Ifi208	UTSW	1	173,510,589 (GRCm39)	missense	probably damaging	0.99
R6915:Ifi208	UTSW	1	173,510,444 (GRCm39)	missense	probably damaging	1.00
R7513:Ifi208	UTSW	1	173,523,220 (GRCm39)	nonsense	probably null
R7972:Ifi208	UTSW	1	173,506,556 (GRCm39)	missense	possibly damaging	0.68
R8383:Ifi208	UTSW	1	173,511,075 (GRCm39)	missense	possibly damaging	0.93
R8431:Ifi208	UTSW	1	173,510,844 (GRCm39)	missense	possibly damaging	0.85
R8794:Ifi208	UTSW	1	173,523,370 (GRCm39)	missense	possibly damaging	0.71
R8823:Ifi208	UTSW	1	173,511,102 (GRCm39)	missense	probably damaging	0.99
R8849:Ifi208	UTSW	1	173,506,184 (GRCm39)	intron	probably benign
R9127:Ifi208	UTSW	1	173,523,400 (GRCm39)	missense	probably benign	0.02
R9225:Ifi208	UTSW	1	173,518,294 (GRCm39)	missense	possibly damaging	0.85
R9336:Ifi208	UTSW	1	173,510,394 (GRCm39)	missense	probably damaging	0.99
R9487:Ifi208	UTSW	1	173,510,961 (GRCm39)	missense	probably damaging	0.99
RF027:Ifi208	UTSW	1	173,505,262 (GRCm39)	small deletion	probably benign
RF029:Ifi208	UTSW	1	173,505,262 (GRCm39)	small deletion	probably benign

Predicted Primers

PCR Primer
(F):5'- CAGTGTCCACGTTTCTAAGAGAC -3'
(R):5'- ATTTCTGTAGGCTCCAGGGG -3'

Sequencing Primer
(F):5'- GTCCACGTTTCTAAGAGACATTCTG -3'
(R):5'- CAGGGGTGTCTGGAGACTGC -3'

Posted On

2020-06-30