Mutagenetix > Incidental Mutations

Incidental Mutation 'R8158:1700016D06Rik'

633370

Institutional Source

Beutler Lab

Gene Symbol

1700016D06Rik

Ensembl Gene

ENSMUSG00000031509

Gene Name

RIKEN cDNA 1700016D06 gene

Synonyms

GC14

MMRRC Submission

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.100) question?

Stock #

R8158 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

11654924-11701063 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 11665056 bp

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 46 (D46V)

Ref Sequence

ENSEMBL: ENSMUSP00000033906 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033906] [ENSMUST00000190741]

Predicted Effect

probably damaging
Transcript: ENSMUST00000033906
AA Change: D46V

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000033906
Gene: ENSMUSG00000031509
AA Change: D46V

Domain	Start	End	E-Value	Type
Pfam:SPACA7	19	122	4.7e-34	PFAM
low complexity region	144	160	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000190741

Predicted Effect

probably benign
Transcript: ENSMUST00000191350

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abl2	T	A	1: 156,642,069	S968T	probably benign	Het
Adcy8	T	C	15: 64,783,806	D608G	probably benign	Het
Adgb	C	T	10: 10,378,734	V1162M	probably benign	Het
Agrn	A	G	4: 156,173,889	V1040A	probably benign	Het
Amer3	A	T	1: 34,587,660	T327S	possibly damaging	Het
Apaf1	C	T	10: 91,059,658	C426Y	probably benign	Het
Bsn	T	C	9: 108,110,033	D2840G	unknown	Het
Camsap1	A	T	2: 25,944,428	C406*	probably null	Het
Cbr2	A	T	11: 120,730,297	M158K	probably damaging	Het
Ccdc105	G	C	10: 78,748,675	Q338E	probably benign	Het
Cgrrf1	T	C	14: 46,853,735	S239P	probably benign	Het
Clnk	C	A	5: 38,794,911		probably null	Het
Csad	T	C	15: 102,177,762	M445V	probably damaging	Het
Dnajb7	T	A	15: 81,407,399	N246Y	probably damaging	Het
Dok6	T	C	18: 89,473,947	I169V	probably benign	Het
Hist1h2bm	T	C	13: 21,722,461	Y122H	probably benign	Het
Il1f10	T	G	2: 24,291,255	I11R	possibly damaging	Het
Irs1	C	T	1: 82,289,533	V321M	probably damaging	Het
Itga9	T	C	9: 118,877,143	F938L	probably damaging	Het
Kif7	T	C	7: 79,704,694	D781G	probably damaging	Het
Klhl41	A	T	2: 69,671,161	N322I	probably damaging	Het
Krtap31-1	T	G	11: 99,908,075	C35G	possibly damaging	Het
Lsm11	A	T	11: 45,933,997	D234E	probably benign	Het
Med6	T	C	12: 81,573,903	K223R	probably benign	Het
Mfsd4b2	G	A	10: 39,922,068	T97I	probably benign	Het
Mrgpra1	A	T	7: 47,335,456	C158*	probably null	Het
Nr2e1	T	C	10: 42,582,885	T8A	probably benign	Het
Oas2	T	C	5: 120,749,773	M1V	probably null	Het
Olfr1048	T	C	2: 86,236,160	Y218C	probably damaging	Het
Olfr1132	T	A	2: 87,634,889	N286I	probably damaging	Het
Olfr307	T	A	7: 86,335,677	I240F	probably benign	Het
Olfr393	T	A	11: 73,847,871	M85L	probably benign	Het
Olfr60	T	C	7: 140,345,249	I247V	probably benign	Het
Otof	C	T	5: 30,380,194	G1257D	probably benign	Het
Phf2	T	C	13: 48,817,760	T479A	probably benign	Het
Pik3c2a	T	C	7: 116,342,997	N1516S	probably benign	Het
Qrich1	C	A	9: 108,556,037	T622K	probably damaging	Het
Rasip1	A	G	7: 45,632,519	K482R	probably damaging	Het
Rgl2	T	C	17: 33,936,944	F698L	probably benign	Het
Scarb1	T	C	5: 125,303,137	D124G	probably benign	Het
Sclt1	A	G	3: 41,671,482	I350T	probably benign	Het
Sec23ip	T	G	7: 128,767,640	V696G	probably damaging	Het
Serpina1e	G	T	12: 103,951,095	T105K	probably benign	Het
Sin3a	A	G	9: 57,113,544		probably null	Het
Slc34a2	A	G	5: 53,060,840	T154A	probably damaging	Het
Slc9a3	T	C	13: 74,155,122	L178P	probably damaging	Het
Smarca2	A	C	19: 26,682,048	I913L	probably benign	Het
Tcea3	G	A	4: 136,273,716		probably null	Het
Tmcc1	T	A	6: 116,043,474	H339L		Het
Trpm2	G	T	10: 77,947,897	H247Q	probably damaging	Het
Tyr	T	A	7: 87,472,516	D356V	probably damaging	Het
Vmn2r54	A	T	7: 12,615,961	C565S	probably damaging	Het
Vmn2r82	A	C	10: 79,377,802	N74T	probably benign	Het
Zcchc4	T	C	5: 52,815,918	Y375H	probably damaging	Het
Zfhx3	T	A	8: 108,948,721	D2134E	possibly damaging	Het
Zfhx4	T	A	3: 5,398,950	Y1414*	probably null	Het
Zfp282	A	T	6: 47,890,692	E267D	possibly damaging	Het
Zfp442	A	T	2: 150,409,176	C269S	possibly damaging	Het
Zp3	T	A	5: 135,985,564	S246T	probably benign	Het

Other mutations in 1700016D06Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01546:1700016D06Rik	APN	8	11656136	missense	probably benign	0.00
R0462:1700016D06Rik	UTSW	8	11661749	intron	probably benign
R4306:1700016D06Rik	UTSW	8	11678590	missense	probably damaging	0.98
R6541:1700016D06Rik	UTSW	8	11662613	missense	probably benign	0.03
R6783:1700016D06Rik	UTSW	8	11655661	nonsense	probably null
R6788:1700016D06Rik	UTSW	8	11678584	missense	possibly damaging	0.85
R7844:1700016D06Rik	UTSW	8	11656174	missense	probably benign	0.01
R7915:1700016D06Rik	UTSW	8	11678645	missense	possibly damaging	0.53
R7942:1700016D06Rik	UTSW	8	11655615	missense	unknown

Predicted Primers

PCR Primer
(F):5'- GGAATTTGGTCAGCGCTAAAGC -3'
(R):5'- ATAGGAGAAGCTCAAGTCCCG -3'

Sequencing Primer
(F):5'- GCTAAAGCTGTGGGCCAG -3'
(R):5'- TTCCCTCAGCGCACAGAG -3'

Posted On

2020-06-30