Incidental Mutation 'R8161:Vmn1r52'
ID 633516
Institutional Source Beutler Lab
Gene Symbol Vmn1r52
Ensembl Gene ENSMUSG00000060816
Gene Name vomeronasal 1 receptor 52
Synonyms V1ra7, VN3
MMRRC Submission 067587-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.065) question?
Stock # R8161 (G1)
Quality Score 225.009
Status Not validated
Chromosome 6
Chromosomal Location 90155698-90156627 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 90156239 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Lysine at position 181 (M181K)
Ref Sequence ENSEMBL: ENSMUSP00000078760 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000079832]
AlphaFold Q9EP79
Predicted Effect possibly damaging
Transcript: ENSMUST00000079832
AA Change: M181K

PolyPhen 2 Score 0.726 (Sensitivity: 0.86; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000078760
Gene: ENSMUSG00000060816
AA Change: M181K

DomainStartEndE-ValueType
Pfam:V1R 38 302 1e-93 PFAM
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.8%
  • 10x: 99.3%
  • 20x: 97.8%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9630041A04Rik T C 9: 101,815,968 (GRCm39) L51P probably damaging Het
Adgrb3 A T 1: 25,133,003 (GRCm39) M1121K probably benign Het
Ank2 T C 3: 126,825,778 (GRCm39) N371S Het
Arhgef5 T A 6: 43,260,885 (GRCm39) C1437S probably damaging Het
Atp8b1 A T 18: 64,690,058 (GRCm39) L558Q probably damaging Het
Bsn T C 9: 108,016,729 (GRCm39) K94R probably benign Het
Cacna2d1 T A 5: 16,519,935 (GRCm39) V435D probably damaging Het
Chd3 T C 11: 69,241,711 (GRCm39) N1474S probably damaging Het
Chd7 A G 4: 8,855,038 (GRCm39) D2089G probably damaging Het
Col11a2 T A 17: 34,270,264 (GRCm39) M492K unknown Het
Col16a1 A T 4: 129,954,262 (GRCm39) T502S unknown Het
Csl A T 10: 99,594,182 (GRCm39) N294K probably damaging Het
Dnah5 T A 15: 28,350,850 (GRCm39) M2624K possibly damaging Het
Dync1li1 C A 9: 114,535,251 (GRCm39) H172N probably damaging Het
Eef1a1 C T 9: 78,387,672 (GRCm39) V59I probably benign Het
Ephb1 T C 9: 102,072,012 (GRCm39) K256E probably damaging Het
Erlin2 C A 8: 27,518,970 (GRCm39) T78N probably damaging Het
Fbxo10 A G 4: 45,044,793 (GRCm39) L614P probably damaging Het
Fer1l4 A T 2: 155,866,555 (GRCm39) D1555E probably benign Het
Gabrr2 A G 4: 33,082,566 (GRCm39) D230G probably damaging Het
Gen1 A T 12: 11,291,465 (GRCm39) S840T probably benign Het
Glyctk G A 9: 106,034,892 (GRCm39) T58I probably benign Het
Gm12258 G A 11: 58,750,138 (GRCm39) A438T unknown Het
Gm14305 A G 2: 176,413,298 (GRCm39) T397A probably benign Het
Hnrnpu G T 1: 178,165,067 (GRCm39) R24S possibly damaging Het
Iffo2 A G 4: 139,302,265 (GRCm39) N3D possibly damaging Het
Insr C T 8: 3,308,660 (GRCm39) M125I probably damaging Het
Itsn1 G A 16: 91,615,446 (GRCm39) R397H unknown Het
Kcnj16 T A 11: 110,915,341 (GRCm39) M1K probably null Het
Kcns3 G A 12: 11,169,764 (GRCm39) probably benign Het
Kmt2c A G 5: 25,579,562 (GRCm39) V578A probably benign Het
Krt79 T C 15: 101,839,137 (GRCm39) K444R probably damaging Het
Mtg2 T C 2: 179,727,368 (GRCm39) V340A probably benign Het
Mtr A C 13: 12,236,372 (GRCm39) L618R probably damaging Het
Myo6 T A 9: 80,124,991 (GRCm39) D23E unknown Het
Nos1ap A G 1: 170,218,328 (GRCm39) V27A probably damaging Het
Npc1 A T 18: 12,328,129 (GRCm39) I1060K possibly damaging Het
Nrbp1 T A 5: 31,401,193 (GRCm39) L23* probably null Het
Or10ag52 T C 2: 87,044,148 (GRCm39) I304T probably damaging Het
Or1p1c A T 11: 74,160,544 (GRCm39) M110L probably benign Het
Or6c6c A T 10: 129,540,753 (GRCm39) K2I possibly damaging Het
Or8b3 C A 9: 38,314,803 (GRCm39) T211K probably damaging Het
Or9s13 G A 1: 92,548,078 (GRCm39) R150H probably benign Het
Pcdhgc5 A T 18: 37,954,615 (GRCm39) T630S probably damaging Het
Pgm2 C A 5: 64,269,503 (GRCm39) T530K probably damaging Het
Phf20l1 A T 15: 66,475,922 (GRCm39) N185I probably damaging Het
Pkp2 A G 16: 16,031,313 (GRCm39) D26G probably damaging Het
Rangap1 C T 15: 81,594,696 (GRCm39) E378K probably benign Het
Rapgef1 A C 2: 29,569,210 (GRCm39) I43L probably benign Het
Rbfox1 A G 16: 7,094,892 (GRCm39) T111A Het
Rptn GCAAGACCAGAGTTCTCACCAGGGTCAGAAAGGCAGACAAGACCAGAGTTCTCACCAGGGTCAGAAAGGCAGACAAGACCAGAGTTCTCACCAGGGTCA GCAAGACCAGAGTTCTCACCAGGGTCAGAAAGGCAGACAAGACCAGAGTTCTCACCAGGGTCA 3: 93,304,000 (GRCm39) probably benign Het
Spata16 A T 3: 26,894,811 (GRCm39) M287L probably benign Het
Speer4a2 T C 5: 26,289,690 (GRCm39) S246G possibly damaging Het
Stau2 A G 1: 16,416,049 (GRCm39) M470T probably benign Het
Tcf12 T C 9: 71,922,933 (GRCm39) Y70C probably damaging Het
Tsc22d1 C T 14: 76,654,460 (GRCm39) T313M probably benign Het
Zbtb48 A T 4: 152,106,567 (GRCm39) C345S probably damaging Het
Zfp628 G A 7: 4,921,958 (GRCm39) R60Q probably damaging Het
Zfp638 T C 6: 83,906,713 (GRCm39) S293P possibly damaging Het
Zkscan17 G A 11: 59,393,770 (GRCm39) P183S probably benign Het
Zscan12 G T 13: 21,547,897 (GRCm39) K26N probably benign Het
Other mutations in Vmn1r52
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01721:Vmn1r52 APN 6 90,155,905 (GRCm39) missense probably benign
IGL02102:Vmn1r52 APN 6 90,156,189 (GRCm39) missense possibly damaging 0.92
IGL02583:Vmn1r52 APN 6 90,156,126 (GRCm39) nonsense probably null
IGL02938:Vmn1r52 APN 6 90,156,295 (GRCm39) missense possibly damaging 0.58
R0233:Vmn1r52 UTSW 6 90,156,593 (GRCm39) missense possibly damaging 0.96
R0233:Vmn1r52 UTSW 6 90,156,593 (GRCm39) missense possibly damaging 0.96
R0904:Vmn1r52 UTSW 6 90,156,446 (GRCm39) missense probably damaging 0.98
R2190:Vmn1r52 UTSW 6 90,156,151 (GRCm39) missense probably benign 0.12
R4184:Vmn1r52 UTSW 6 90,156,219 (GRCm39) missense probably benign 0.00
R4906:Vmn1r52 UTSW 6 90,155,930 (GRCm39) missense possibly damaging 0.63
R5475:Vmn1r52 UTSW 6 90,155,894 (GRCm39) missense probably benign 0.04
R5689:Vmn1r52 UTSW 6 90,156,232 (GRCm39) missense possibly damaging 0.95
R5740:Vmn1r52 UTSW 6 90,156,176 (GRCm39) missense probably benign 0.02
R7263:Vmn1r52 UTSW 6 90,156,535 (GRCm39) missense probably benign 0.00
R7337:Vmn1r52 UTSW 6 90,156,605 (GRCm39) missense probably benign 0.31
R7374:Vmn1r52 UTSW 6 90,156,118 (GRCm39) missense probably benign 0.08
R8699:Vmn1r52 UTSW 6 90,155,742 (GRCm39) missense probably benign 0.02
R8747:Vmn1r52 UTSW 6 90,156,451 (GRCm39) missense probably benign 0.36
R9721:Vmn1r52 UTSW 6 90,156,008 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TTGAGTGTCTTCCAGGCCATC -3'
(R):5'- TAGAATGGTCCTGAGGGCTC -3'

Sequencing Primer
(F):5'- GCCCTCAAAGCTCTCACTTAG -3'
(R):5'- TCCTGAGGGCTCGTTGC -3'
Posted On 2020-07-13