Incidental Mutation 'R8162:Gm9008'
ID633568
Institutional Source Beutler Lab
Gene Symbol Gm9008
Ensembl Gene ENSMUSG00000072476
Gene Namepredicted pseudogene 9008
Synonyms
MMRRC Submission
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.128) question?
Stock #R8162 (G1)
Quality Score225.009
Status Not validated
Chromosome6
Chromosomal Location76495432-76497784 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to A at 76496575 bp
ZygosityHeterozygous
Amino Acid Change Alanine to Serine at position 353 (A353S)
Ref Sequence ENSEMBL: ENSMUSP00000126976 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000097218]
Predicted Effect probably benign
Transcript: ENSMUST00000097218
AA Change: A353S

PolyPhen 2 Score 0.035 (Sensitivity: 0.94; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000126976
Gene: ENSMUSG00000072476
AA Change: A353S

DomainStartEndE-ValueType
transmembrane domain 20 42 N/A INTRINSIC
transmembrane domain 55 77 N/A INTRINSIC
transmembrane domain 148 170 N/A INTRINSIC
transmembrane domain 183 205 N/A INTRINSIC
low complexity region 208 221 N/A INTRINSIC
transmembrane domain 225 247 N/A INTRINSIC
low complexity region 301 316 N/A INTRINSIC
RING 371 412 8.29e-2 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.3%
  • 20x: 97.8%
Validation Efficiency 98% (47/48)
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Apol7b T A 15: 77,423,230 Q355L probably benign Het
Asb14 A T 14: 26,911,988 Q383H probably benign Het
Ash1l T G 3: 89,070,246 M2661R probably damaging Het
Cacna1e G T 1: 154,701,567 probably null Het
Ccdc40 G T 11: 119,260,044 probably null Het
Cd27 T A 6: 125,233,225 probably null Het
Ces3b T C 8: 105,090,753 L371S possibly damaging Het
Clec4a2 T A 6: 123,140,752 Y210N probably damaging Het
Cpeb2 A T 5: 43,237,338 H553L Het
Cpne8 T C 15: 90,619,678 I95V probably benign Het
D630039A03Rik T C 4: 57,910,525 T96A probably benign Het
Dand5 C A 8: 84,816,518 G110C probably damaging Het
Erich3 C T 3: 154,764,573 T1554M unknown Het
Evi5l T C 8: 4,191,300 S278P probably damaging Het
Fam208b G T 13: 3,599,691 T36N probably damaging Het
Farp2 C A 1: 93,620,603 H1003Q probably damaging Het
G530012D18Rik C G 1: 85,577,214 D113E unknown Het
Gm13741 A C 2: 87,656,102 M273R possibly damaging Het
Gm28363 T A 1: 117,698,911 D26E unknown Het
Gm8674 A T 13: 49,900,371 D700E noncoding transcript Het
Gtf3c4 G A 2: 28,834,581 Q380* probably null Het
Idh2 GGTCCCAG GG 7: 80,098,329 probably benign Het
Il1a A T 2: 129,306,557 S78T possibly damaging Het
Kdm2b A T 5: 122,934,793 Y341N probably damaging Het
Mcc T C 18: 44,449,441 probably null Het
Met A G 6: 17,547,062 D898G probably damaging Het
Mogs T C 6: 83,115,882 V101A probably damaging Het
Mrgpra4 A T 7: 47,981,473 Y127N probably damaging Het
Ms4a18 A G 19: 11,013,707 S8P probably benign Het
Muc4 A T 16: 32,750,379 T148S unknown Het
Nutm1 G A 2: 112,248,472 L1033F probably benign Het
Ocstamp G T 2: 165,397,867 A133D probably damaging Het
Olfr146 T A 9: 39,018,953 D196V probably benign Het
Olfr374 T G 8: 72,110,409 V281G noncoding transcript Het
Olfr466 G A 13: 65,152,920 R232Q probably damaging Het
Olfr487 T C 7: 108,211,788 H247R probably damaging Het
Papd4 A G 13: 93,167,924 probably null Het
Phf12 C A 11: 78,024,825 P46Q probably damaging Het
Prf1 A G 10: 61,302,970 T236A probably damaging Het
Ptcd3 A G 6: 71,907,814 V47A probably benign Het
Rapgef1 A T 2: 29,735,999 N1071Y probably damaging Het
Rftn1 G T 17: 50,047,380 A318D probably damaging Het
Tango6 C T 8: 106,683,250 P33L possibly damaging Het
Tbc1d2b C T 9: 90,207,884 R864H probably damaging Het
Trav10n A T 14: 53,122,472 I69L probably benign Het
Tsks A G 7: 44,953,872 Q366R probably damaging Het
Vcan G T 13: 89,704,987 S618* probably null Het
Vwf T A 6: 125,645,836 probably null Het
Zfp827 T A 8: 79,060,577 L124* probably null Het
Other mutations in Gm9008
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0322:Gm9008 UTSW 6 76496418 missense probably benign 0.14
R0943:Gm9008 UTSW 6 76496415 missense probably benign 0.09
R1767:Gm9008 UTSW 6 76497605 missense unknown
R1807:Gm9008 UTSW 6 76497414 missense probably benign 0.09
R3773:Gm9008 UTSW 6 76496959 missense probably benign 0.00
R4515:Gm9008 UTSW 6 76496809 missense probably benign 0.00
R6408:Gm9008 UTSW 6 76496458 missense probably damaging 1.00
R7686:Gm9008 UTSW 6 76497030 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GGGCAGTTGCAATGGTAAAC -3'
(R):5'- GGATATCGTACGGCTGACTC -3'

Sequencing Primer
(F):5'- TTGCAATGGTAAACAGGGTGGC -3'
(R):5'- TCCACTACGTCTGGAGGCTTG -3'
Posted On2020-07-13