Incidental Mutation 'R8171:Slit1'
ID |
634169 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Slit1
|
Ensembl Gene |
ENSMUSG00000025020 |
Gene Name |
slit guidance ligand 1 |
Synonyms |
Slil1 |
MMRRC Submission |
067597-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R8171 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
19 |
Chromosomal Location |
41588696-41732104 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 41715512 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Leucine
at position 113
(R113L)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000025993
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025993]
[ENSMUST00000166496]
[ENSMUST00000169141]
[ENSMUST00000171586]
|
AlphaFold |
Q80TR4 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000025993
AA Change: R113L
PolyPhen 2
Score 0.971 (Sensitivity: 0.77; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000025993 Gene: ENSMUSG00000025020 AA Change: R113L
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
CT
|
1462 |
1531 |
3.15e-4 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000166496
AA Change: R113L
PolyPhen 2
Score 0.992 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000128381 Gene: ENSMUSG00000025020 AA Change: R113L
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
low complexity region
|
1437 |
1458 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000169141
AA Change: R113L
PolyPhen 2
Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000129034 Gene: ENSMUSG00000025020 AA Change: R113L
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000171586
AA Change: R113L
PolyPhen 2
Score 0.862 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000126139 Gene: ENSMUSG00000025020 AA Change: R113L
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
2.24e-3 |
SMART |
LRR
|
133 |
155 |
3.98e1 |
SMART |
LRR_TYP
|
156 |
179 |
3.44e-4 |
SMART |
LRRCT
|
191 |
240 |
3.51e-6 |
SMART |
LRRNT
|
257 |
289 |
3e-8 |
SMART |
LRR
|
283 |
307 |
6.41e1 |
SMART |
LRR_TYP
|
308 |
331 |
8.22e-2 |
SMART |
LRR_TYP
|
332 |
355 |
9.08e-4 |
SMART |
LRR
|
356 |
379 |
2.82e0 |
SMART |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.4%
- 20x: 97.9%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a reporter allele exhibit normal interneuron numbers and morphology. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 95 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
3425401B19Rik |
G |
T |
14: 32,383,982 (GRCm39) |
A661E |
probably benign |
Het |
Abhd14a |
T |
A |
9: 106,317,960 (GRCm39) |
T142S |
probably benign |
Het |
Actn1 |
A |
G |
12: 80,243,167 (GRCm39) |
|
probably null |
Het |
Adss2 |
T |
C |
1: 177,623,917 (GRCm39) |
N15S |
probably benign |
Het |
Alpk2 |
A |
G |
18: 65,439,054 (GRCm39) |
S780P |
probably benign |
Het |
Asap1 |
G |
T |
15: 63,982,815 (GRCm39) |
L830M |
probably damaging |
Het |
Atic |
T |
C |
1: 71,609,032 (GRCm39) |
V319A |
possibly damaging |
Het |
Atp8a2 |
A |
T |
14: 60,283,493 (GRCm39) |
I87N |
probably damaging |
Het |
Bace2 |
G |
T |
16: 97,225,786 (GRCm39) |
V407L |
possibly damaging |
Het |
Bltp1 |
T |
C |
3: 37,029,862 (GRCm39) |
V2423A |
probably benign |
Het |
Bmp3 |
A |
T |
5: 99,020,528 (GRCm39) |
Y317F |
probably damaging |
Het |
Ccdc159 |
A |
G |
9: 21,845,007 (GRCm39) |
E291G |
possibly damaging |
Het |
Cct8l1 |
T |
A |
5: 25,721,552 (GRCm39) |
L89Q |
probably damaging |
Het |
Cep83 |
T |
A |
10: 94,604,797 (GRCm39) |
N503K |
possibly damaging |
Het |
Ces4a |
A |
G |
8: 105,873,839 (GRCm39) |
Y436C |
probably damaging |
Het |
Cftr |
T |
A |
6: 18,258,287 (GRCm39) |
D579E |
probably damaging |
Het |
Chd9 |
T |
A |
8: 91,752,015 (GRCm39) |
V1751D |
possibly damaging |
Het |
Clasp2 |
A |
T |
9: 113,732,974 (GRCm39) |
T937S |
possibly damaging |
Het |
Clock |
T |
A |
5: 76,414,261 (GRCm39) |
D17V |
possibly damaging |
Het |
Cpm |
T |
C |
10: 117,519,220 (GRCm39) |
L376P |
probably damaging |
Het |
Crocc2 |
T |
C |
1: 93,116,723 (GRCm39) |
|
probably null |
Het |
Csnk1g2 |
A |
G |
10: 80,475,636 (GRCm39) |
D401G |
probably damaging |
Het |
Cyb5r4 |
C |
T |
9: 86,924,863 (GRCm39) |
L206F |
possibly damaging |
Het |
Cyp1a1 |
T |
A |
9: 57,607,479 (GRCm39) |
W36R |
probably benign |
Het |
Cyp3a59 |
A |
T |
5: 146,022,584 (GRCm39) |
H30L |
probably damaging |
Het |
Dab2 |
G |
A |
15: 6,453,407 (GRCm39) |
V182I |
probably benign |
Het |
Dnah1 |
G |
T |
14: 31,019,067 (GRCm39) |
F1342L |
probably damaging |
Het |
Draxin |
A |
T |
4: 148,200,123 (GRCm39) |
L109Q |
possibly damaging |
Het |
Elfn1 |
G |
A |
5: 139,957,112 (GRCm39) |
V39M |
probably damaging |
Het |
Erlin1 |
A |
G |
19: 44,057,768 (GRCm39) |
I19T |
probably benign |
Het |
F830016B08Rik |
T |
A |
18: 60,433,150 (GRCm39) |
S78T |
possibly damaging |
Het |
Fer1l4 |
A |
G |
2: 155,890,151 (GRCm39) |
V258A |
probably benign |
Het |
Fgb |
T |
C |
3: 82,949,822 (GRCm39) |
D445G |
probably damaging |
Het |
Fgd6 |
T |
C |
10: 93,910,194 (GRCm39) |
|
probably null |
Het |
Frem3 |
T |
A |
8: 81,341,869 (GRCm39) |
D1387E |
probably damaging |
Het |
Gdf3 |
T |
C |
6: 122,586,862 (GRCm39) |
T22A |
probably benign |
Het |
Glcci1 |
C |
T |
6: 8,593,167 (GRCm39) |
A511V |
probably benign |
Het |
Gldc |
A |
T |
19: 30,111,161 (GRCm39) |
N538K |
probably benign |
Het |
Glipr1l1 |
C |
T |
10: 111,914,289 (GRCm39) |
P217S |
probably benign |
Het |
Gpr161 |
A |
G |
1: 165,134,005 (GRCm39) |
N89S |
probably damaging |
Het |
Gypa |
T |
A |
8: 81,236,092 (GRCm39) |
S166T |
probably benign |
Het |
Hcar1 |
A |
G |
5: 124,017,152 (GRCm39) |
S180P |
probably damaging |
Het |
Hcn1 |
T |
C |
13: 117,739,270 (GRCm39) |
S11P |
unknown |
Het |
Hectd4 |
A |
G |
5: 121,456,819 (GRCm39) |
E728G |
possibly damaging |
Het |
Ints14 |
A |
T |
9: 64,880,532 (GRCm39) |
H213L |
possibly damaging |
Het |
Itih1 |
A |
T |
14: 30,659,047 (GRCm39) |
M323K |
possibly damaging |
Het |
Ivl |
A |
G |
3: 92,479,085 (GRCm39) |
S327P |
probably damaging |
Het |
Kcnt2 |
T |
A |
1: 140,437,203 (GRCm39) |
N545K |
probably benign |
Het |
Kdm4b |
A |
T |
17: 56,696,534 (GRCm39) |
R417W |
probably damaging |
Het |
Kif13a |
T |
C |
13: 46,932,444 (GRCm39) |
E1083G |
probably damaging |
Het |
Klhl40 |
A |
T |
9: 121,607,623 (GRCm39) |
H261L |
probably benign |
Het |
Kpnb1 |
A |
G |
11: 97,066,573 (GRCm39) |
|
probably null |
Het |
Lamc3 |
C |
A |
2: 31,804,983 (GRCm39) |
T621N |
probably benign |
Het |
Lingo3 |
T |
C |
10: 80,670,595 (GRCm39) |
H445R |
probably benign |
Het |
Ly75 |
G |
A |
2: 60,144,572 (GRCm39) |
T1297I |
possibly damaging |
Het |
Lypd6 |
C |
T |
2: 50,080,759 (GRCm39) |
T149M |
possibly damaging |
Het |
Mcrs1 |
A |
T |
15: 99,146,613 (GRCm39) |
D139E |
probably damaging |
Het |
Muc5b |
G |
A |
7: 141,414,737 (GRCm39) |
S2561N |
unknown |
Het |
Mybpc1 |
C |
T |
10: 88,358,865 (GRCm39) |
G1095R |
probably damaging |
Het |
Myh1 |
A |
G |
11: 67,093,398 (GRCm39) |
Y163C |
probably damaging |
Het |
Notch4 |
T |
A |
17: 34,801,483 (GRCm39) |
C1110* |
probably null |
Het |
Nt5el |
T |
A |
13: 105,246,291 (GRCm39) |
V284E |
probably benign |
Het |
Or12j2 |
A |
T |
7: 139,916,143 (GRCm39) |
I123F |
probably damaging |
Het |
Or2ag1 |
C |
T |
7: 106,313,825 (GRCm39) |
S21N |
probably benign |
Het |
Or2ag1 |
T |
A |
7: 106,313,826 (GRCm39) |
S21C |
|
Het |
Or4c10b |
A |
G |
2: 89,711,409 (GRCm39) |
I80V |
probably benign |
Het |
Pcsk1 |
T |
A |
13: 75,238,210 (GRCm39) |
C10* |
probably null |
Het |
Pdlim5 |
A |
T |
3: 142,017,948 (GRCm39) |
S107T |
probably benign |
Het |
Plac8l1 |
T |
A |
18: 42,313,445 (GRCm39) |
D99V |
probably damaging |
Het |
Plin2 |
A |
T |
4: 86,575,349 (GRCm39) |
V400E |
probably damaging |
Het |
Plxna1 |
G |
A |
6: 89,334,102 (GRCm39) |
P176S |
probably benign |
Het |
Pnn |
A |
G |
12: 59,117,223 (GRCm39) |
K238R |
probably damaging |
Het |
Pou5f1 |
A |
G |
17: 35,820,933 (GRCm39) |
E231G |
probably benign |
Het |
Ppara |
A |
T |
15: 85,682,077 (GRCm39) |
M258L |
probably benign |
Het |
Prune2 |
G |
A |
19: 17,097,882 (GRCm39) |
D1129N |
probably damaging |
Het |
Rai14 |
G |
A |
15: 10,633,249 (GRCm39) |
T47M |
probably damaging |
Het |
Rdh5 |
T |
C |
10: 128,753,969 (GRCm39) |
I117V |
probably benign |
Het |
Rpain |
G |
A |
11: 70,864,724 (GRCm39) |
C137Y |
probably damaging |
Het |
Scn3a |
A |
G |
2: 65,361,154 (GRCm39) |
V126A |
possibly damaging |
Het |
Senp7 |
G |
T |
16: 55,932,089 (GRCm39) |
L129F |
probably damaging |
Het |
Setd1a |
A |
G |
7: 127,390,399 (GRCm39) |
D1025G |
unknown |
Het |
Sirt4 |
A |
T |
5: 115,621,082 (GRCm39) |
V30E |
probably damaging |
Het |
Stxbp5l |
G |
A |
16: 37,028,416 (GRCm39) |
T549I |
noncoding transcript |
Het |
Sytl2 |
A |
G |
7: 90,058,678 (GRCm39) |
M926V |
probably damaging |
Het |
Tgfbr2 |
C |
T |
9: 115,959,074 (GRCm39) |
W113* |
probably null |
Het |
Tmem86a |
A |
G |
7: 46,703,512 (GRCm39) |
Y213C |
probably damaging |
Het |
Tpo |
T |
A |
12: 30,154,045 (GRCm39) |
Y220F |
probably damaging |
Het |
Ttc6 |
C |
A |
12: 57,720,096 (GRCm39) |
A889E |
probably damaging |
Het |
Tyw1 |
A |
G |
5: 130,328,855 (GRCm39) |
D547G |
probably benign |
Het |
Ubtfl1 |
A |
G |
9: 18,320,523 (GRCm39) |
K17R |
probably benign |
Het |
Usp46 |
T |
A |
5: 74,163,354 (GRCm39) |
I331F |
probably benign |
Het |
Vmn2r111 |
T |
C |
17: 22,792,073 (GRCm39) |
H61R |
probably benign |
Het |
Wdr75 |
T |
A |
1: 45,861,706 (GRCm39) |
N715K |
probably benign |
Het |
Wdr97 |
C |
A |
15: 76,247,819 (GRCm39) |
F1614L |
|
Het |
Zfp772 |
A |
T |
7: 7,207,096 (GRCm39) |
C198* |
probably null |
Het |
|
Other mutations in Slit1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00162:Slit1
|
APN |
19 |
41,639,274 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00515:Slit1
|
APN |
19 |
41,612,940 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL00909:Slit1
|
APN |
19 |
41,590,694 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL00953:Slit1
|
APN |
19 |
41,590,739 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01116:Slit1
|
APN |
19 |
41,594,824 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL01457:Slit1
|
APN |
19 |
41,599,483 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01688:Slit1
|
APN |
19 |
41,717,545 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01720:Slit1
|
APN |
19 |
41,622,653 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01925:Slit1
|
APN |
19 |
41,596,817 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02008:Slit1
|
APN |
19 |
41,634,579 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02312:Slit1
|
APN |
19 |
41,590,119 (GRCm39) |
missense |
possibly damaging |
0.66 |
IGL02398:Slit1
|
APN |
19 |
41,590,676 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02542:Slit1
|
APN |
19 |
41,615,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02559:Slit1
|
APN |
19 |
41,709,524 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02609:Slit1
|
APN |
19 |
41,590,743 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02623:Slit1
|
APN |
19 |
41,640,122 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02729:Slit1
|
APN |
19 |
41,591,773 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03230:Slit1
|
APN |
19 |
41,717,524 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03387:Slit1
|
APN |
19 |
41,591,881 (GRCm39) |
missense |
possibly damaging |
0.57 |
PIT4576001:Slit1
|
UTSW |
19 |
41,612,988 (GRCm39) |
missense |
possibly damaging |
0.52 |
R0366:Slit1
|
UTSW |
19 |
41,599,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R0432:Slit1
|
UTSW |
19 |
41,731,732 (GRCm39) |
missense |
probably damaging |
0.98 |
R0496:Slit1
|
UTSW |
19 |
41,596,750 (GRCm39) |
splice site |
probably benign |
|
R0722:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1488:Slit1
|
UTSW |
19 |
41,596,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1615:Slit1
|
UTSW |
19 |
41,639,110 (GRCm39) |
splice site |
probably benign |
|
R1694:Slit1
|
UTSW |
19 |
41,626,031 (GRCm39) |
missense |
possibly damaging |
0.69 |
R1762:Slit1
|
UTSW |
19 |
41,591,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R1842:Slit1
|
UTSW |
19 |
41,709,477 (GRCm39) |
critical splice donor site |
probably null |
|
R1844:Slit1
|
UTSW |
19 |
41,614,012 (GRCm39) |
missense |
probably damaging |
1.00 |
R1940:Slit1
|
UTSW |
19 |
41,619,215 (GRCm39) |
missense |
probably damaging |
1.00 |
R2087:Slit1
|
UTSW |
19 |
41,625,922 (GRCm39) |
missense |
probably benign |
0.00 |
R2094:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2095:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2104:Slit1
|
UTSW |
19 |
41,590,686 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2305:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2972:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2973:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2974:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R3159:Slit1
|
UTSW |
19 |
41,592,812 (GRCm39) |
missense |
probably benign |
|
R3752:Slit1
|
UTSW |
19 |
41,635,406 (GRCm39) |
critical splice donor site |
probably null |
|
R4095:Slit1
|
UTSW |
19 |
41,596,925 (GRCm39) |
intron |
probably benign |
|
R4282:Slit1
|
UTSW |
19 |
41,602,856 (GRCm39) |
missense |
probably benign |
|
R4417:Slit1
|
UTSW |
19 |
41,602,908 (GRCm39) |
missense |
probably damaging |
1.00 |
R4607:Slit1
|
UTSW |
19 |
41,605,232 (GRCm39) |
missense |
probably benign |
0.10 |
R4729:Slit1
|
UTSW |
19 |
41,635,459 (GRCm39) |
missense |
probably damaging |
1.00 |
R4756:Slit1
|
UTSW |
19 |
41,637,452 (GRCm39) |
missense |
probably damaging |
1.00 |
R4764:Slit1
|
UTSW |
19 |
41,709,483 (GRCm39) |
nonsense |
probably null |
|
R4849:Slit1
|
UTSW |
19 |
41,637,983 (GRCm39) |
missense |
probably benign |
0.17 |
R4874:Slit1
|
UTSW |
19 |
41,717,493 (GRCm39) |
critical splice donor site |
probably null |
|
R5581:Slit1
|
UTSW |
19 |
41,605,102 (GRCm39) |
critical splice donor site |
probably null |
|
R5699:Slit1
|
UTSW |
19 |
41,613,959 (GRCm39) |
critical splice donor site |
probably null |
|
R5888:Slit1
|
UTSW |
19 |
41,731,735 (GRCm39) |
missense |
probably damaging |
1.00 |
R5906:Slit1
|
UTSW |
19 |
41,594,813 (GRCm39) |
missense |
probably damaging |
1.00 |
R6176:Slit1
|
UTSW |
19 |
41,626,034 (GRCm39) |
missense |
probably damaging |
1.00 |
R6277:Slit1
|
UTSW |
19 |
41,588,948 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6702:Slit1
|
UTSW |
19 |
41,603,309 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6860:Slit1
|
UTSW |
19 |
41,605,154 (GRCm39) |
missense |
probably benign |
0.10 |
R7015:Slit1
|
UTSW |
19 |
41,618,325 (GRCm39) |
nonsense |
probably null |
|
R7172:Slit1
|
UTSW |
19 |
41,623,105 (GRCm39) |
missense |
probably damaging |
1.00 |
R7512:Slit1
|
UTSW |
19 |
41,589,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7568:Slit1
|
UTSW |
19 |
41,590,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7614:Slit1
|
UTSW |
19 |
41,622,639 (GRCm39) |
missense |
probably damaging |
1.00 |
R7650:Slit1
|
UTSW |
19 |
41,618,363 (GRCm39) |
missense |
probably damaging |
1.00 |
R7687:Slit1
|
UTSW |
19 |
41,639,128 (GRCm39) |
missense |
probably benign |
0.03 |
R7732:Slit1
|
UTSW |
19 |
41,592,847 (GRCm39) |
missense |
probably benign |
0.01 |
R7947:Slit1
|
UTSW |
19 |
41,599,248 (GRCm39) |
missense |
probably benign |
|
R7947:Slit1
|
UTSW |
19 |
41,599,247 (GRCm39) |
missense |
probably damaging |
1.00 |
R8217:Slit1
|
UTSW |
19 |
41,612,959 (GRCm39) |
missense |
possibly damaging |
0.60 |
R8355:Slit1
|
UTSW |
19 |
41,634,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R9025:Slit1
|
UTSW |
19 |
41,612,968 (GRCm39) |
missense |
probably benign |
0.01 |
R9124:Slit1
|
UTSW |
19 |
41,594,951 (GRCm39) |
missense |
probably benign |
0.02 |
R9288:Slit1
|
UTSW |
19 |
41,613,144 (GRCm39) |
intron |
probably benign |
|
R9343:Slit1
|
UTSW |
19 |
41,615,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R9435:Slit1
|
UTSW |
19 |
41,591,764 (GRCm39) |
critical splice donor site |
probably null |
|
R9563:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R9564:Slit1
|
UTSW |
19 |
41,591,861 (GRCm39) |
missense |
probably benign |
0.16 |
R9595:Slit1
|
UTSW |
19 |
41,637,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R9667:Slit1
|
UTSW |
19 |
41,731,832 (GRCm39) |
nonsense |
probably null |
|
X0023:Slit1
|
UTSW |
19 |
41,590,079 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- TTTTAGGGACCAGCAGCAGG -3'
(R):5'- TCTATGTAGGACCTGGGCATGG -3'
Sequencing Primer
(F):5'- GATTACCATCTCACCATGC -3'
(R):5'- GTCCCCCAGCCCACATTG -3'
|
Posted On |
2020-07-13 |