Incidental Mutation 'R8191:Vmn2r104'
ID |
635186 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r104
|
Ensembl Gene |
ENSMUSG00000090315 |
Gene Name |
vomeronasal 2, receptor 104 |
Synonyms |
V2r7 |
MMRRC Submission |
067614-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.108)
|
Stock # |
R8191 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
20249687-20268467 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 20250465 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Aspartic acid
at position 602
(V602D)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000129895
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000168050]
|
AlphaFold |
E9Q2J5 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000168050
AA Change: V602D
PolyPhen 2
Score 0.886 (Sensitivity: 0.82; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000129895 Gene: ENSMUSG00000090315 AA Change: V602D
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
85 |
457 |
4e-38 |
PFAM |
Pfam:NCD3G
|
512 |
565 |
2.1e-20 |
PFAM |
Pfam:7tm_3
|
598 |
833 |
1.7e-52 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.5%
- 20x: 98.4%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 72 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700037C18Rik |
G |
A |
16: 3,724,918 (GRCm39) |
R49W |
probably damaging |
Het |
Adamts4 |
T |
C |
1: 171,080,292 (GRCm39) |
S282P |
|
Het |
Aqp4 |
A |
G |
18: 15,531,222 (GRCm39) |
S180P |
probably benign |
Het |
Armc2 |
T |
G |
10: 41,839,747 (GRCm39) |
E406A |
probably benign |
Het |
Atp13a3 |
A |
T |
16: 30,168,598 (GRCm39) |
Y464N |
probably damaging |
Het |
B3gnt3 |
C |
A |
8: 72,146,122 (GRCm39) |
V136L |
probably benign |
Het |
Cacna1s |
C |
T |
1: 136,035,893 (GRCm39) |
H1378Y |
probably damaging |
Het |
Ccnk |
A |
T |
12: 108,159,933 (GRCm39) |
E138D |
probably benign |
Het |
Cenpe |
A |
G |
3: 134,957,375 (GRCm39) |
K1878E |
probably benign |
Het |
Cep57l1 |
T |
A |
10: 41,616,955 (GRCm39) |
I111L |
probably damaging |
Het |
Cfap298 |
G |
T |
16: 90,727,889 (GRCm39) |
N100K |
probably damaging |
Het |
Copg2 |
T |
C |
6: 30,790,665 (GRCm39) |
I509V |
probably benign |
Het |
Cux2 |
T |
A |
5: 122,012,217 (GRCm39) |
D406V |
probably benign |
Het |
Cyp2a12 |
G |
T |
7: 26,730,529 (GRCm39) |
A165S |
probably benign |
Het |
Dnaaf5 |
T |
G |
5: 139,167,250 (GRCm39) |
S719A |
probably benign |
Het |
Dnah7c |
A |
G |
1: 46,646,618 (GRCm39) |
I1220V |
possibly damaging |
Het |
Dnai3 |
G |
T |
3: 145,800,066 (GRCm39) |
P158H |
probably damaging |
Het |
Dnajb8 |
C |
T |
6: 88,199,940 (GRCm39) |
R159C |
possibly damaging |
Het |
Dusp10 |
T |
A |
1: 183,769,749 (GRCm39) |
D238E |
possibly damaging |
Het |
Dync1li1 |
C |
A |
9: 114,538,253 (GRCm39) |
D203E |
probably benign |
Het |
Ecpas |
A |
T |
4: 58,872,587 (GRCm39) |
|
probably null |
Het |
Eif5b |
T |
C |
1: 38,075,283 (GRCm39) |
S587P |
probably damaging |
Het |
Ephb2 |
G |
A |
4: 136,386,256 (GRCm39) |
T832I |
probably damaging |
Het |
Exoc1 |
T |
A |
5: 76,707,674 (GRCm39) |
|
probably null |
Het |
Fam193a |
T |
A |
5: 34,597,917 (GRCm39) |
N571K |
probably damaging |
Het |
Fem1a |
T |
A |
17: 56,565,356 (GRCm39) |
I483N |
probably damaging |
Het |
Fgf20 |
C |
A |
8: 40,761,361 (GRCm39) |
|
probably benign |
Het |
Fkbp1a |
C |
T |
2: 151,399,356 (GRCm39) |
P98S |
|
Het |
Gpsm3 |
A |
T |
17: 34,809,451 (GRCm39) |
D19V |
probably benign |
Het |
Ido2 |
C |
A |
8: 25,023,696 (GRCm39) |
G381W |
probably damaging |
Het |
Ifi204 |
T |
C |
1: 173,579,226 (GRCm39) |
T540A |
possibly damaging |
Het |
Isl1 |
A |
T |
13: 116,441,954 (GRCm39) |
M93K |
probably benign |
Het |
Map3k10 |
T |
A |
7: 27,362,671 (GRCm39) |
S472C |
probably damaging |
Het |
Mcrs1 |
A |
T |
15: 99,141,206 (GRCm39) |
V432E |
probably damaging |
Het |
Metap2 |
A |
G |
10: 93,701,267 (GRCm39) |
|
probably null |
Het |
Muc5b |
A |
G |
7: 141,421,421 (GRCm39) |
S4304G |
probably benign |
Het |
Myef2l |
G |
T |
3: 10,153,914 (GRCm39) |
V228F |
probably damaging |
Het |
Nell1 |
T |
C |
7: 50,098,622 (GRCm39) |
V308A |
unknown |
Het |
Or10g1b |
A |
G |
14: 52,627,987 (GRCm39) |
V81A |
probably benign |
Het |
Or4d5 |
A |
T |
9: 40,012,767 (GRCm39) |
H6Q |
probably benign |
Het |
Plxna4 |
C |
A |
6: 32,493,885 (GRCm39) |
V244F |
possibly damaging |
Het |
Pnpla6 |
T |
C |
8: 3,592,382 (GRCm39) |
S1224P |
probably benign |
Het |
Ripk4 |
A |
G |
16: 97,564,726 (GRCm39) |
|
probably benign |
Het |
Rnpep |
T |
C |
1: 135,200,172 (GRCm39) |
E261G |
possibly damaging |
Het |
Robo1 |
C |
A |
16: 72,730,142 (GRCm39) |
S194R |
probably damaging |
Het |
Rpusd1 |
C |
G |
17: 25,947,611 (GRCm39) |
Y99* |
probably null |
Het |
Scarf1 |
T |
C |
11: 75,413,065 (GRCm39) |
M437T |
probably benign |
Het |
Sh3tc2 |
G |
T |
18: 62,106,429 (GRCm39) |
D153Y |
probably damaging |
Het |
Siglec1 |
T |
C |
2: 130,927,599 (GRCm39) |
Y69C |
probably damaging |
Het |
Slc25a34 |
T |
C |
4: 141,347,895 (GRCm39) |
Y262C |
probably damaging |
Het |
Srrm2 |
T |
A |
17: 24,039,219 (GRCm39) |
N1954K |
probably damaging |
Het |
St6galnac2 |
T |
C |
11: 116,572,748 (GRCm39) |
Y236C |
probably damaging |
Het |
Stac3 |
T |
A |
10: 127,344,068 (GRCm39) |
I322N |
probably damaging |
Het |
Tcaf1 |
T |
C |
6: 42,652,190 (GRCm39) |
Q764R |
probably damaging |
Het |
Tcf20 |
G |
A |
15: 82,737,606 (GRCm39) |
R1282* |
probably null |
Het |
Tlr2 |
T |
A |
3: 83,743,821 (GRCm39) |
K754M |
probably damaging |
Het |
Tlr2 |
T |
G |
3: 83,743,822 (GRCm39) |
K754Q |
probably damaging |
Het |
Tnn |
C |
T |
1: 159,953,088 (GRCm39) |
V651M |
probably damaging |
Het |
Ttn |
T |
C |
2: 76,701,083 (GRCm39) |
H9622R |
unknown |
Het |
Tubgcp6 |
C |
T |
15: 89,004,843 (GRCm39) |
G259S |
probably damaging |
Het |
Ubr5 |
C |
A |
15: 38,006,751 (GRCm39) |
C1174F |
|
Het |
Ugt2b35 |
T |
A |
5: 87,149,302 (GRCm39) |
S184R |
probably damaging |
Het |
Vit |
C |
T |
17: 78,853,828 (GRCm39) |
H25Y |
probably benign |
Het |
Vmn1r177 |
G |
A |
7: 23,565,736 (GRCm39) |
Q47* |
probably null |
Het |
Vmn2r115 |
A |
G |
17: 23,578,530 (GRCm39) |
T668A |
probably damaging |
Het |
Vmn2r125 |
T |
G |
4: 156,703,709 (GRCm39) |
C362W |
probably damaging |
Het |
Vwa7 |
A |
G |
17: 35,238,712 (GRCm39) |
T267A |
probably damaging |
Het |
Xpa |
C |
A |
4: 46,183,225 (GRCm39) |
R188L |
possibly damaging |
Het |
Zfp143 |
C |
T |
7: 109,676,364 (GRCm39) |
T249I |
probably damaging |
Het |
Zfp607a |
A |
G |
7: 27,578,868 (GRCm39) |
E646G |
possibly damaging |
Het |
Zfp729a |
A |
T |
13: 67,769,838 (GRCm39) |
S130R |
probably benign |
Het |
Zswim3 |
C |
A |
2: 164,662,128 (GRCm39) |
Q203K |
probably damaging |
Het |
|
Other mutations in Vmn2r104 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00427:Vmn2r104
|
APN |
17 |
20,258,501 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL01098:Vmn2r104
|
APN |
17 |
20,268,358 (GRCm39) |
missense |
probably benign |
0.27 |
IGL01333:Vmn2r104
|
APN |
17 |
20,263,055 (GRCm39) |
missense |
probably benign |
0.17 |
IGL01527:Vmn2r104
|
APN |
17 |
20,263,158 (GRCm39) |
missense |
possibly damaging |
0.82 |
IGL01773:Vmn2r104
|
APN |
17 |
20,260,930 (GRCm39) |
missense |
probably benign |
0.10 |
IGL01939:Vmn2r104
|
APN |
17 |
20,250,187 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02121:Vmn2r104
|
APN |
17 |
20,262,056 (GRCm39) |
nonsense |
probably null |
|
IGL02305:Vmn2r104
|
APN |
17 |
20,263,118 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02374:Vmn2r104
|
APN |
17 |
20,263,048 (GRCm39) |
missense |
probably benign |
0.34 |
IGL03260:Vmn2r104
|
APN |
17 |
20,263,083 (GRCm39) |
missense |
probably benign |
0.05 |
IGL03366:Vmn2r104
|
APN |
17 |
20,249,866 (GRCm39) |
missense |
probably damaging |
1.00 |
R0091:Vmn2r104
|
UTSW |
17 |
20,262,075 (GRCm39) |
missense |
possibly damaging |
0.79 |
R0125:Vmn2r104
|
UTSW |
17 |
20,250,069 (GRCm39) |
missense |
probably damaging |
0.98 |
R0257:Vmn2r104
|
UTSW |
17 |
20,249,889 (GRCm39) |
missense |
probably damaging |
1.00 |
R0381:Vmn2r104
|
UTSW |
17 |
20,268,264 (GRCm39) |
nonsense |
probably null |
|
R0709:Vmn2r104
|
UTSW |
17 |
20,263,166 (GRCm39) |
missense |
probably damaging |
1.00 |
R0786:Vmn2r104
|
UTSW |
17 |
20,262,987 (GRCm39) |
missense |
probably benign |
|
R1575:Vmn2r104
|
UTSW |
17 |
20,262,477 (GRCm39) |
missense |
probably damaging |
1.00 |
R1827:Vmn2r104
|
UTSW |
17 |
20,262,497 (GRCm39) |
missense |
probably damaging |
0.97 |
R1932:Vmn2r104
|
UTSW |
17 |
20,261,031 (GRCm39) |
missense |
probably damaging |
1.00 |
R1956:Vmn2r104
|
UTSW |
17 |
20,262,313 (GRCm39) |
missense |
probably damaging |
0.98 |
R2203:Vmn2r104
|
UTSW |
17 |
20,250,083 (GRCm39) |
missense |
probably benign |
0.05 |
R2205:Vmn2r104
|
UTSW |
17 |
20,250,083 (GRCm39) |
missense |
probably benign |
0.05 |
R2859:Vmn2r104
|
UTSW |
17 |
20,268,455 (GRCm39) |
missense |
possibly damaging |
0.82 |
R3701:Vmn2r104
|
UTSW |
17 |
20,249,818 (GRCm39) |
missense |
probably damaging |
1.00 |
R3834:Vmn2r104
|
UTSW |
17 |
20,250,183 (GRCm39) |
missense |
probably benign |
0.02 |
R4151:Vmn2r104
|
UTSW |
17 |
20,250,147 (GRCm39) |
missense |
probably damaging |
1.00 |
R4470:Vmn2r104
|
UTSW |
17 |
20,262,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R4625:Vmn2r104
|
UTSW |
17 |
20,268,443 (GRCm39) |
missense |
probably benign |
0.00 |
R4754:Vmn2r104
|
UTSW |
17 |
20,261,030 (GRCm39) |
nonsense |
probably null |
|
R4911:Vmn2r104
|
UTSW |
17 |
20,250,288 (GRCm39) |
missense |
probably benign |
0.00 |
R5270:Vmn2r104
|
UTSW |
17 |
20,258,528 (GRCm39) |
missense |
probably damaging |
1.00 |
R5279:Vmn2r104
|
UTSW |
17 |
20,262,146 (GRCm39) |
missense |
probably benign |
0.07 |
R5311:Vmn2r104
|
UTSW |
17 |
20,250,163 (GRCm39) |
missense |
probably damaging |
1.00 |
R5370:Vmn2r104
|
UTSW |
17 |
20,250,450 (GRCm39) |
missense |
probably damaging |
0.97 |
R5461:Vmn2r104
|
UTSW |
17 |
20,250,343 (GRCm39) |
missense |
probably damaging |
1.00 |
R5683:Vmn2r104
|
UTSW |
17 |
20,260,981 (GRCm39) |
nonsense |
probably null |
|
R5795:Vmn2r104
|
UTSW |
17 |
20,250,544 (GRCm39) |
missense |
possibly damaging |
0.89 |
R5795:Vmn2r104
|
UTSW |
17 |
20,250,372 (GRCm39) |
missense |
probably benign |
0.02 |
R5970:Vmn2r104
|
UTSW |
17 |
20,249,733 (GRCm39) |
missense |
probably benign |
0.01 |
R5983:Vmn2r104
|
UTSW |
17 |
20,261,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R5992:Vmn2r104
|
UTSW |
17 |
20,249,747 (GRCm39) |
missense |
probably damaging |
1.00 |
R6066:Vmn2r104
|
UTSW |
17 |
20,258,573 (GRCm39) |
missense |
possibly damaging |
0.69 |
R6156:Vmn2r104
|
UTSW |
17 |
20,261,909 (GRCm39) |
missense |
probably damaging |
1.00 |
R6182:Vmn2r104
|
UTSW |
17 |
20,250,507 (GRCm39) |
missense |
probably benign |
0.16 |
R6245:Vmn2r104
|
UTSW |
17 |
20,261,829 (GRCm39) |
missense |
possibly damaging |
0.69 |
R6333:Vmn2r104
|
UTSW |
17 |
20,249,848 (GRCm39) |
missense |
probably benign |
0.30 |
R6573:Vmn2r104
|
UTSW |
17 |
20,262,487 (GRCm39) |
missense |
probably damaging |
1.00 |
R7101:Vmn2r104
|
UTSW |
17 |
20,250,358 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7123:Vmn2r104
|
UTSW |
17 |
20,261,088 (GRCm39) |
missense |
probably benign |
0.12 |
R7485:Vmn2r104
|
UTSW |
17 |
20,249,737 (GRCm39) |
missense |
probably benign |
0.01 |
R7514:Vmn2r104
|
UTSW |
17 |
20,249,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R7634:Vmn2r104
|
UTSW |
17 |
20,261,971 (GRCm39) |
missense |
possibly damaging |
0.48 |
R7958:Vmn2r104
|
UTSW |
17 |
20,262,988 (GRCm39) |
missense |
probably benign |
|
R8031:Vmn2r104
|
UTSW |
17 |
20,263,048 (GRCm39) |
missense |
probably benign |
0.34 |
R8094:Vmn2r104
|
UTSW |
17 |
20,250,483 (GRCm39) |
missense |
possibly damaging |
0.77 |
R8308:Vmn2r104
|
UTSW |
17 |
20,261,040 (GRCm39) |
missense |
possibly damaging |
0.55 |
R8691:Vmn2r104
|
UTSW |
17 |
20,262,110 (GRCm39) |
missense |
probably damaging |
0.98 |
R8795:Vmn2r104
|
UTSW |
17 |
20,262,988 (GRCm39) |
missense |
probably benign |
|
R8900:Vmn2r104
|
UTSW |
17 |
20,261,924 (GRCm39) |
missense |
probably damaging |
0.99 |
R8913:Vmn2r104
|
UTSW |
17 |
20,249,968 (GRCm39) |
missense |
probably damaging |
1.00 |
R9180:Vmn2r104
|
UTSW |
17 |
20,263,087 (GRCm39) |
missense |
probably benign |
0.00 |
R9199:Vmn2r104
|
UTSW |
17 |
20,262,097 (GRCm39) |
missense |
probably damaging |
0.99 |
R9282:Vmn2r104
|
UTSW |
17 |
20,261,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R9303:Vmn2r104
|
UTSW |
17 |
20,268,439 (GRCm39) |
missense |
possibly damaging |
0.90 |
R9305:Vmn2r104
|
UTSW |
17 |
20,268,439 (GRCm39) |
missense |
possibly damaging |
0.90 |
R9322:Vmn2r104
|
UTSW |
17 |
20,263,087 (GRCm39) |
missense |
probably benign |
0.00 |
R9325:Vmn2r104
|
UTSW |
17 |
20,268,433 (GRCm39) |
missense |
possibly damaging |
0.95 |
R9414:Vmn2r104
|
UTSW |
17 |
20,250,250 (GRCm39) |
missense |
probably damaging |
0.99 |
R9785:Vmn2r104
|
UTSW |
17 |
20,268,409 (GRCm39) |
missense |
probably benign |
|
RF007:Vmn2r104
|
UTSW |
17 |
20,268,302 (GRCm39) |
missense |
probably benign |
0.36 |
Z1177:Vmn2r104
|
UTSW |
17 |
20,250,051 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TTGGCCAACACAGTGGCAAG -3'
(R):5'- TGGACACCTGATCTCATTTAAGC -3'
Sequencing Primer
(F):5'- GCCATAGTGAAAGCAACTGC -3'
(R):5'- GCCTATATTTCTGACCAGATGTAGAC -3'
|
Posted On |
2020-07-13 |