Mutagenetix > Incidental Mutation

Incidental Mutation 'R8202:Nmral1'

635734

Institutional Source

Beutler Lab

Gene Symbol

Nmral1

Ensembl Gene

ENSMUSG00000063445

Gene Name

NmrA-like family domain containing 1

Synonyms

1110025F24Rik

MMRRC Submission

067625-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8202 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

4529181-4537220 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 4532448 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Methionine at position 131 (T131M)

Ref Sequence

ENSEMBL: ENSMUSP00000078132 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000074970] [ENSMUST00000079130] [ENSMUST00000115851] [ENSMUST00000120056]

AlphaFold

Q8K2T1

Predicted Effect

probably damaging
Transcript: ENSMUST00000074970
AA Change: T121M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000074500
Gene: ENSMUSG00000063445
AA Change: T121M

Domain	Start	End	E-Value	Type
Pfam:adh_short	5	80	2.2e-7	PFAM
Pfam:KR	6	79	1.5e-7	PFAM
Pfam:TrkA_N	7	92	4.1e-7	PFAM
Pfam:NAD_binding_10	7	191	5.9e-17	PFAM
Pfam:NmrA	7	240	1e-58	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000079130
AA Change: T131M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000078132
Gene: ENSMUSG00000063445
AA Change: T131M

Domain	Start	End	E-Value	Type
Pfam:NmrA	7	250	3.9e-50	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000115851
AA Change: T121M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000111517
Gene: ENSMUSG00000063445
AA Change: T121M

Domain	Start	End	E-Value	Type
Pfam:adh_short	5	80	3.9e-7	PFAM
Pfam:KR	6	79	2.4e-7	PFAM
Pfam:TrkA_N	7	93	9.2e-8	PFAM
Pfam:NAD_binding_10	7	188	8.1e-17	PFAM
Pfam:NmrA	7	240	1.5e-58	PFAM
low complexity region	242	253	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000120056
AA Change: T121M

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000112754
Gene: ENSMUSG00000063445
AA Change: T121M

Domain	Start	End	E-Value	Type
Pfam:adh_short	5	80	1.1e-6	PFAM
Pfam:KR	6	79	7.4e-7	PFAM
Pfam:TrkA_N	7	112	5.9e-7	PFAM
Pfam:NAD_binding_10	7	188	4.2e-16	PFAM
Pfam:NmrA	7	240	6.7e-58	PFAM

Coding Region Coverage

1x: 99.9%
3x: 99.9%
10x: 99.3%
20x: 97.6%

Validation Efficiency

100% (50/50)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an NADPH sensor protein that preferentially binds to NADPH. The encoded protein also negatively regulates the activity of NF-kappaB in a ubiquitylation-dependent manner. It plays a key role in cellular antiviral response by negatively regulating the interferon response factor 3-mediated expression of interferon beta. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Feb 2015]

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930474N05Rik	C	T	14: 35,817,057 (GRCm39)	R36C	probably benign	Het
B020011L13Rik	A	T	1: 117,728,874 (GRCm39)	H127L	probably damaging	Het
B4galt4	A	G	16: 38,588,274 (GRCm39)	Q306R	probably benign	Het
Bckdha	G	A	7: 25,329,738 (GRCm39)	H431Y	probably damaging	Het
Cacna1e	T	A	1: 154,274,195 (GRCm39)	M2256L	probably benign	Het
Ccar1	A	T	10: 62,607,768 (GRCm39)	F298L	possibly damaging	Het
Ceacam3	G	A	7: 16,896,953 (GRCm39)	A640T		Het
Cers3	A	G	7: 66,435,761 (GRCm39)	D240G	probably damaging	Het
Ces1d	T	C	8: 93,919,495 (GRCm39)	E99G	probably benign	Het
Dnah2	A	G	11: 69,369,649 (GRCm39)	V1609A	probably benign	Het
Fer1l6	T	C	15: 58,502,486 (GRCm39)	F1329S	probably damaging	Het
Fry	A	G	5: 150,355,202 (GRCm39)	Q1825R	probably damaging	Het
Guf1	C	A	5: 69,720,545 (GRCm39)	A335E	possibly damaging	Het
Heatr6	C	A	11: 83,650,234 (GRCm39)	T230K	possibly damaging	Het
Klhl11	G	A	11: 100,354,150 (GRCm39)	S557L	probably benign	Het
Map10	A	G	8: 126,397,647 (GRCm39)	N347D	possibly damaging	Het
Myh7	T	C	14: 55,227,497 (GRCm39)	I313V	probably benign	Het
Myl10	G	C	5: 136,726,825 (GRCm39)	V70L	probably benign	Het
Npr1	T	A	3: 90,368,731 (GRCm39)	Y443F	probably benign	Het
Ntn4	A	G	10: 93,480,765 (GRCm39)	N163S	possibly damaging	Het
Nufip1	A	G	14: 76,348,604 (GRCm39)	I78V	probably benign	Het
Oplah	C	T	15: 76,186,669 (GRCm39)	G670D	probably benign	Het
Or51a24	A	G	7: 103,734,198 (GRCm39)	S30P	probably benign	Het
Or5j3	A	T	2: 86,128,968 (GRCm39)	E269D	probably benign	Het
Or6c69b	T	C	10: 129,626,518 (GRCm39)	*313W	probably null	Het
Pcnx1	T	G	12: 81,941,821 (GRCm39)	I73S	probably benign	Het
Pigp	A	T	16: 94,165,528 (GRCm39)	N204K	probably benign	Het
Prelid2	T	A	18: 42,065,802 (GRCm39)	I78F	possibly damaging	Het
Ptprb	A	G	10: 116,189,750 (GRCm39)	Y1516C	probably damaging	Het
Rab31	T	C	17: 65,974,881 (GRCm39)	E157G	probably damaging	Het
Rars2	T	C	4: 34,656,180 (GRCm39)	Y445H	probably damaging	Het
Rnf220	T	A	4: 117,347,070 (GRCm39)	H114L	probably damaging	Het
Ryr1	A	G	7: 28,790,457 (GRCm39)	W1450R	probably benign	Het
Slamf6	A	G	1: 171,761,786 (GRCm39)	Y69C	probably benign	Het
Smc3	T	C	19: 53,617,123 (GRCm39)	I512T	possibly damaging	Het
Sspo	A	G	6: 48,434,534 (GRCm39)	T1009A	probably damaging	Het
St3gal3	T	A	4: 117,964,868 (GRCm39)		probably benign	Het
Tbc1d23	A	G	16: 57,011,917 (GRCm39)	F338L	probably damaging	Het
Tgs1	G	A	4: 3,586,097 (GRCm39)	A325T	probably benign	Het
Tmem30a	A	T	9: 79,681,494 (GRCm39)	I261K	probably damaging	Het
Trim3	A	T	7: 105,260,632 (GRCm39)	H662Q	possibly damaging	Het
Unc13c	C	T	9: 73,643,844 (GRCm39)	V1207M	probably damaging	Het
Vmn1r91	A	T	7: 19,835,749 (GRCm39)	I223F	probably damaging	Het
Vmn2r33	A	T	7: 7,557,153 (GRCm39)	C516S	possibly damaging	Het
Vps13c	T	C	9: 67,851,328 (GRCm39)	V2321A	probably damaging	Het
Zan	G	T	5: 137,387,589 (GRCm39)	T4874K	unknown	Het
Zfp677	T	C	17: 21,613,535 (GRCm39)	L43S	probably damaging	Het
Zfp709	A	G	8: 72,642,760 (GRCm39)		probably null	Het

Other mutations in Nmral1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00650:Nmral1	APN	16	4,534,240 (GRCm39)	missense	probably benign	0.02
IGL00948:Nmral1	APN	16	4,534,270 (GRCm39)	missense	probably damaging	1.00
IGL02065:Nmral1	APN	16	4,534,346 (GRCm39)	missense	probably benign	0.43
R2061:Nmral1	UTSW	16	4,534,193 (GRCm39)	missense	probably damaging	1.00
R2070:Nmral1	UTSW	16	4,534,211 (GRCm39)	missense	probably damaging	1.00
R2071:Nmral1	UTSW	16	4,534,211 (GRCm39)	missense	probably damaging	1.00
R3150:Nmral1	UTSW	16	4,534,333 (GRCm39)	missense	probably damaging	1.00
R4369:Nmral1	UTSW	16	4,532,394 (GRCm39)	missense	probably damaging	1.00
R4689:Nmral1	UTSW	16	4,532,422 (GRCm39)	missense	probably damaging	1.00
R4690:Nmral1	UTSW	16	4,534,205 (GRCm39)	missense	probably damaging	1.00
R4786:Nmral1	UTSW	16	4,534,288 (GRCm39)	missense	probably damaging	1.00
R4948:Nmral1	UTSW	16	4,534,274 (GRCm39)	nonsense	probably null
R5090:Nmral1	UTSW	16	4,532,395 (GRCm39)	missense	probably damaging	1.00
R5503:Nmral1	UTSW	16	4,533,493 (GRCm39)	missense	probably benign
R5989:Nmral1	UTSW	16	4,536,902 (GRCm39)	start gained	probably benign
R6525:Nmral1	UTSW	16	4,532,296 (GRCm39)	nonsense	probably null
R7313:Nmral1	UTSW	16	4,531,660 (GRCm39)	missense	probably benign	0.00
R8257:Nmral1	UTSW	16	4,534,267 (GRCm39)	missense	probably damaging	1.00
R8280:Nmral1	UTSW	16	4,531,659 (GRCm39)	missense	probably damaging	0.98
R9228:Nmral1	UTSW	16	4,531,631 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCTCCATGTGCTGAGAACTG -3'
(R):5'- ACATTATTCCTGAGCAGAGAGC -3'

Sequencing Primer
(F):5'- CCATGTGCTGAGAACTGTGTTTCAC -3'
(R):5'- CAGAGAGCTTCCTTGGGGTAGAG -3'

Posted On

2020-07-13