Mutagenetix > Incidental Mutation

Incidental Mutation 'R8272:Cfap45'

637757

Institutional Source

Beutler Lab

Gene Symbol

Cfap45

Ensembl Gene

ENSMUSG00000026546

Gene Name

cilia and flagella associated protein 45

Synonyms

1700028D05Rik, Nesg1, Ccdc19

MMRRC Submission

067695-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.715) question?

Stock #

R8272 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

172348697-172373437 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 172355406 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Glutamine at position 18 (R18Q)

Ref Sequence

ENSEMBL: ENSMUSP00000083057 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000085894] [ENSMUST00000159395] [ENSMUST00000159792] [ENSMUST00000161140] [ENSMUST00000162988]

AlphaFold

Q9D9U9

Predicted Effect

possibly damaging
Transcript: ENSMUST00000085894
AA Change: R18Q

PolyPhen 2 Score 0.533 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000083057
Gene: ENSMUSG00000026546
AA Change: R18Q

Domain	Start	End	E-Value	Type
low complexity region	8	29	N/A	INTRINSIC
Pfam:TPH	187	532	1.5e-85	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000159395

SMART Domains

Protein: ENSMUSP00000125224
Gene: ENSMUSG00000026546

Domain	Start	End	E-Value	Type
coiled coil region	128	162	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000159792

SMART Domains

Protein: ENSMUSP00000124540
Gene: ENSMUSG00000026546

Domain	Start	End	E-Value	Type
coiled coil region	128	162	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000161140

Predicted Effect

probably benign
Transcript: ENSMUST00000162988

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931422A03Rik	G	A	2: 103,856,499 (GRCm39)	R21C	unknown	Het
4933407L21Rik	G	T	1: 85,859,118 (GRCm39)	E90*	probably null	Het
Abca15	A	G	7: 120,006,665 (GRCm39)	Y1643C	probably damaging	Het
Adtrp	G	T	13: 41,969,630 (GRCm39)	A123D	probably damaging	Het
Asmt	A	T	X: 169,106,460 (GRCm39)	D20V	possibly damaging	Het
Bid	T	C	6: 120,877,176 (GRCm39)	E55G	probably damaging	Het
Brd3	A	G	2: 27,351,725 (GRCm39)	V176A	probably benign	Het
Btnl2	G	T	17: 34,575,275 (GRCm39)		probably null	Het
Card11	A	G	5: 140,875,794 (GRCm39)	S562P	probably damaging	Het
Carmil1	T	G	13: 24,220,562 (GRCm39)	H1054P	probably benign	Het
Casp8	T	G	1: 58,872,901 (GRCm39)	M259R	probably damaging	Het
Ccin	G	A	4: 43,984,064 (GRCm39)	R157H	probably damaging	Het
Chuk	A	G	19: 44,092,175 (GRCm39)	I41T	possibly damaging	Het
Col28a1	G	A	6: 8,154,175 (GRCm39)	P333L	possibly damaging	Het
Cspg4b	A	T	13: 113,504,889 (GRCm39)	D1979V		Het
Ctnna3	T	G	10: 64,838,377 (GRCm39)	V818G	probably damaging	Het
Cyp4f18	G	T	8: 72,742,935 (GRCm39)	L456M	probably benign	Het
Ddx50	A	G	10: 62,457,256 (GRCm39)	V598A	probably benign	Het
Dhrs7b	C	A	11: 60,742,580 (GRCm39)	Q91K	probably benign	Het
Dnah11	T	A	12: 118,074,752 (GRCm39)	T1367S	probably benign	Het
Fam98b	T	A	2: 117,093,335 (GRCm39)	C183S	probably benign	Het
Fbxl12	C	A	9: 20,550,160 (GRCm39)	R165L	possibly damaging	Het
Fbxw15	A	C	9: 109,388,828 (GRCm39)	S194A	probably benign	Het
Flrt3	G	T	2: 140,502,617 (GRCm39)	P337Q	probably damaging	Het
Gm12695	A	G	4: 96,612,183 (GRCm39)	Y527H	possibly damaging	Het
Gramd1b	T	C	9: 40,215,820 (GRCm39)	T677A	probably benign	Het
Grm8	A	T	6: 27,363,281 (GRCm39)	S745T	probably damaging	Het
Kctd8	T	C	5: 69,267,803 (GRCm39)	K436E	probably benign	Het
Klf5	G	T	14: 99,539,540 (GRCm39)	A318S	possibly damaging	Het
L3mbtl3	C	T	10: 26,179,566 (GRCm39)	V505M	unknown	Het
Letm2	A	G	8: 26,076,672 (GRCm39)	L310P	probably damaging	Het
Lrrc4	T	C	6: 28,662,192 (GRCm39)	H174R	unknown	Het
Myh11	T	C	16: 14,036,718 (GRCm39)	S995G		Het
Myh7b	A	T	2: 155,474,824 (GRCm39)	E1787D	probably damaging	Het
Myoc	T	C	1: 162,466,995 (GRCm39)	S55P	probably benign	Het
Naaladl2	T	C	3: 24,112,366 (GRCm39)	Q572R	probably damaging	Het
Nanog	T	A	6: 122,688,736 (GRCm39)	S131T	probably benign	Het
Nifk	A	G	1: 118,260,134 (GRCm39)	K230E	probably benign	Het
Nlrp10	A	G	7: 108,525,103 (GRCm39)	S126P	probably benign	Het
Npc1l1	T	A	11: 6,179,327 (GRCm39)	K28*	probably null	Het
Or13m2-ps1	A	G	6: 42,778,038 (GRCm39)	D121G	probably damaging	Het
Or5b102	G	A	19: 13,040,795 (GRCm39)	V7M	possibly damaging	Het
Pcdhac2	T	A	18: 37,279,242 (GRCm39)	C741S	probably benign	Het
Pcx	A	T	19: 4,651,758 (GRCm39)	N45I	probably damaging	Het
Peak1	A	G	9: 56,166,182 (GRCm39)	V582A	probably damaging	Het
Plcxd3	G	T	15: 4,546,218 (GRCm39)	R74L	probably damaging	Het
Ptpn21	G	A	12: 98,654,789 (GRCm39)	A726V	probably benign	Het
Rftn1	G	T	17: 50,354,408 (GRCm39)	A318D	probably damaging	Het
Rimbp3	T	C	16: 17,026,969 (GRCm39)	V131A	possibly damaging	Het
Rrp1b	A	G	17: 32,276,163 (GRCm39)	K570R	probably benign	Het
Serpinb1a	A	T	13: 33,029,720 (GRCm39)	F167L	probably damaging	Het
Slc12a1	T	C	2: 125,070,736 (GRCm39)	L1076S	probably damaging	Het
Sspo	A	T	6: 48,425,453 (GRCm39)	T25S	probably benign	Het
Syvn1	G	A	19: 6,097,971 (GRCm39)	R3H	probably damaging	Het
Tead2	A	G	7: 44,878,166 (GRCm39)	E280G	probably benign	Het
Tmem263	T	A	10: 84,950,431 (GRCm39)	V74E	possibly damaging	Het
Tmem38b	T	A	4: 53,854,332 (GRCm39)	L188Q	probably damaging	Het
Tmod4	C	T	3: 95,033,171 (GRCm39)	T55I	probably damaging	Het
Tmprss12	A	T	15: 100,180,146 (GRCm39)	E62V	probably benign	Het
Trim27	G	A	13: 21,364,780 (GRCm39)	C39Y	probably benign	Het
Vmn2r110	A	G	17: 20,816,490 (GRCm39)	L11S	probably damaging	Het
Vmn2r125	A	G	4: 156,702,373 (GRCm39)	Y53C	probably damaging	Het
Vmn2r65	A	T	7: 84,596,817 (GRCm39)	F79L	probably benign	Het
Vps13a	A	G	19: 16,727,209 (GRCm39)		probably null	Het
Zdbf2	A	G	1: 63,345,142 (GRCm39)	T1174A	probably benign	Het
Zfhx4	T	G	3: 5,308,927 (GRCm39)	S718A	probably damaging	Het
Zfp78	A	G	7: 6,376,213 (GRCm39)	T41A	probably benign	Het

Other mutations in Cfap45

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00332:Cfap45	APN	1	172,362,912 (GRCm39)	unclassified	probably benign
IGL01936:Cfap45	APN	1	172,361,616 (GRCm39)	missense	probably damaging	1.00
IGL03235:Cfap45	APN	1	172,366,060 (GRCm39)	missense	possibly damaging	0.55
R0194:Cfap45	UTSW	1	172,368,894 (GRCm39)	missense	probably benign	0.05
R0883:Cfap45	UTSW	1	172,359,756 (GRCm39)	missense	possibly damaging	0.90
R1130:Cfap45	UTSW	1	172,373,264 (GRCm39)	missense	probably damaging	1.00
R1168:Cfap45	UTSW	1	172,373,264 (GRCm39)	missense	probably damaging	1.00
R1356:Cfap45	UTSW	1	172,355,430 (GRCm39)	missense	possibly damaging	0.53
R1522:Cfap45	UTSW	1	172,368,139 (GRCm39)	missense	probably damaging	1.00
R1921:Cfap45	UTSW	1	172,372,679 (GRCm39)	missense	probably damaging	1.00
R1922:Cfap45	UTSW	1	172,372,679 (GRCm39)	missense	probably damaging	1.00
R2203:Cfap45	UTSW	1	172,359,728 (GRCm39)	missense	probably benign	0.28
R2204:Cfap45	UTSW	1	172,359,728 (GRCm39)	missense	probably benign	0.28
R2205:Cfap45	UTSW	1	172,359,728 (GRCm39)	missense	probably benign	0.28
R3156:Cfap45	UTSW	1	172,373,291 (GRCm39)	missense	possibly damaging	0.93
R4059:Cfap45	UTSW	1	172,366,056 (GRCm39)	missense	probably benign	0.00
R4151:Cfap45	UTSW	1	172,359,788 (GRCm39)	missense	probably damaging	0.98
R4445:Cfap45	UTSW	1	172,362,794 (GRCm39)	missense	probably benign	0.07
R4548:Cfap45	UTSW	1	172,372,675 (GRCm39)	missense	probably benign	0.00
R4582:Cfap45	UTSW	1	172,357,479 (GRCm39)	missense	probably benign	0.42
R4909:Cfap45	UTSW	1	172,357,443 (GRCm39)	missense	probably benign	0.14
R5200:Cfap45	UTSW	1	172,372,696 (GRCm39)	nonsense	probably null
R5800:Cfap45	UTSW	1	172,366,167 (GRCm39)	missense	probably damaging	0.98
R6520:Cfap45	UTSW	1	172,368,151 (GRCm39)	missense	probably damaging	1.00
R6662:Cfap45	UTSW	1	172,357,417 (GRCm39)	missense	probably benign	0.01
R7378:Cfap45	UTSW	1	172,365,910 (GRCm39)	splice site	probably null
R7390:Cfap45	UTSW	1	172,368,925 (GRCm39)	missense	probably benign	0.00
R7468:Cfap45	UTSW	1	172,362,877 (GRCm39)	nonsense	probably null
R7545:Cfap45	UTSW	1	172,366,163 (GRCm39)	missense	probably benign
R7988:Cfap45	UTSW	1	172,357,501 (GRCm39)	missense	probably damaging	1.00
R8212:Cfap45	UTSW	1	172,369,067 (GRCm39)	splice site	probably null
R8939:Cfap45	UTSW	1	172,372,834 (GRCm39)	missense	probably damaging	1.00
R9461:Cfap45	UTSW	1	172,362,894 (GRCm39)	missense	possibly damaging	0.92
Z1176:Cfap45	UTSW	1	172,372,851 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- TGGACACGTTCGTTCTATAAGAGG -3'
(R):5'- GATGTCAGAGCCAGGATCTC -3'

Sequencing Primer
(F):5'- ACACGTTCGTTCTATAAGAGGTTTTG -3'
(R):5'- GAGCCAGGATCTCTGAATCTC -3'

Posted On

2020-07-28