Incidental Mutation 'R8272:Pcdhac2'
ID 637813
Institutional Source Beutler Lab
Gene Symbol Pcdhac2
Ensembl Gene ENSMUSG00000102697
Gene Name protocadherin alpha subfamily C, 2
Synonyms CNRc2
MMRRC Submission 067695-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R8272 (G1)
Quality Score 225.009
Status Not validated
Chromosome 18
Chromosomal Location 37276731-37320716 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 37279242 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Cysteine to Serine at position 741 (C741S)
Ref Sequence ENSEMBL: ENSMUSP00000039888 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000007584] [ENSMUST00000047479] [ENSMUST00000047614] [ENSMUST00000070797] [ENSMUST00000115657] [ENSMUST00000115658] [ENSMUST00000115659] [ENSMUST00000115661] [ENSMUST00000115662] [ENSMUST00000192168] [ENSMUST00000192295] [ENSMUST00000192447] [ENSMUST00000192503] [ENSMUST00000192512] [ENSMUST00000192631] [ENSMUST00000193389] [ENSMUST00000193777] [ENSMUST00000193839] [ENSMUST00000194038] [ENSMUST00000194544] [ENSMUST00000194751] [ENSMUST00000195590]
AlphaFold Q91Y09
Predicted Effect probably benign
Transcript: ENSMUST00000007584
SMART Domains Protein: ENSMUSP00000007584
Gene: ENSMUSG00000103255

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
CA 45 122 3.59e-1 SMART
CA 146 231 6.32e-22 SMART
CA 255 338 5.18e-18 SMART
CA 362 443 9.73e-23 SMART
CA 467 554 4.24e-23 SMART
CA 584 662 1.11e-8 SMART
Pfam:Cadherin_C_2 682 773 1.1e-12 PFAM
Pfam:Cadherin_tail 813 947 5.4e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000047479
AA Change: C741S

PolyPhen 2 Score 0.302 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000039888
Gene: ENSMUSG00000102697
AA Change: C741S

DomainStartEndE-ValueType
CA 30 145 9.8e-3 SMART
CA 169 254 2.07e-17 SMART
CA 278 362 2.86e-29 SMART
CA 386 466 4.79e-22 SMART
CA 490 576 1.44e-25 SMART
CA 606 687 3.45e-14 SMART
Pfam:Cadherin_C_2 702 809 1.2e-26 PFAM
low complexity region 810 823 N/A INTRINSIC
Pfam:Cadherin_tail 855 989 5.8e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000047614
SMART Domains Protein: ENSMUSP00000047609
Gene: ENSMUSG00000103310

DomainStartEndE-ValueType
CA 19 131 3.78e-2 SMART
CA 155 240 3.26e-24 SMART
CA 264 348 6.37e-27 SMART
CA 372 453 3.31e-25 SMART
CA 477 563 6.18e-25 SMART
CA 594 676 5.6e-14 SMART
low complexity region 679 696 N/A INTRINSIC
transmembrane domain 699 721 N/A INTRINSIC
Pfam:Cadherin_tail 799 933 5.3e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000070797
SMART Domains Protein: ENSMUSP00000068828
Gene: ENSMUSG00000103442

DomainStartEndE-ValueType
CA 22 132 3.09e-2 SMART
CA 156 241 6.14e-20 SMART
CA 265 349 3.92e-27 SMART
CA 373 454 4.94e-24 SMART
CA 478 564 1e-24 SMART
CA 592 672 4.55e-14 SMART
transmembrane domain 694 716 N/A INTRINSIC
Pfam:Cadherin_tail 797 931 5.3e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000115657
SMART Domains Protein: ENSMUSP00000111321
Gene: ENSMUSG00000102206

DomainStartEndE-ValueType
CA 21 131 2.95e-2 SMART
CA 155 240 7.44e-19 SMART
CA 264 347 5.63e-28 SMART
CA 371 452 3.14e-26 SMART
CA 476 562 1.42e-24 SMART
CA 593 675 1.03e-12 SMART
transmembrane domain 697 719 N/A INTRINSIC
low complexity region 783 794 N/A INTRINSIC
low complexity region 918 942 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000115658
SMART Domains Protein: ENSMUSP00000111322
Gene: ENSMUSG00000007440

DomainStartEndE-ValueType
low complexity region 15 21 N/A INTRINSIC
CA 46 132 6.34e-2 SMART
CA 156 241 4.65e-20 SMART
CA 265 349 1.25e-25 SMART
CA 373 454 9.22e-24 SMART
CA 478 564 4.3e-24 SMART
CA 595 678 5.07e-12 SMART
low complexity region 706 721 N/A INTRINSIC
Pfam:Cadherin_tail 795 929 5.3e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000115659
SMART Domains Protein: ENSMUSP00000111323
Gene: ENSMUSG00000103770

DomainStartEndE-ValueType
low complexity region 44 51 N/A INTRINSIC
CA 75 161 2.46e-2 SMART
CA 185 270 8.1e-20 SMART
CA 294 378 1.69e-22 SMART
CA 402 483 1.52e-24 SMART
CA 507 593 5.68e-24 SMART
CA 624 705 6.69e-12 SMART
transmembrane domain 727 749 N/A INTRINSIC
Pfam:Cadherin_tail 828 962 5.6e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000115661
SMART Domains Protein: ENSMUSP00000111325
Gene: ENSMUSG00000103458

DomainStartEndE-ValueType
CA 20 131 5.3e-2 SMART
CA 155 240 1.51e-19 SMART
CA 264 348 7.6e-25 SMART
CA 372 453 1.42e-24 SMART
CA 477 563 1.42e-24 SMART
CA 594 674 4.12e-12 SMART
low complexity region 706 721 N/A INTRINSIC
Pfam:Cadherin_tail 796 930 3.9e-58 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000115662
SMART Domains Protein: ENSMUSP00000111326
Gene: ENSMUSG00000104148

DomainStartEndE-ValueType
CA 45 131 6.34e-2 SMART
CA 155 240 2.98e-18 SMART
CA 264 348 2.17e-29 SMART
CA 372 453 2.84e-24 SMART
CA 477 563 5.02e-25 SMART
CA 594 675 8.16e-16 SMART
transmembrane domain 695 717 N/A INTRINSIC
low complexity region 916 940 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000192168
SMART Domains Protein: ENSMUSP00000142293
Gene: ENSMUSG00000103092

DomainStartEndE-ValueType
CA 21 131 2.2e-2 SMART
CA 155 240 2.05e-21 SMART
CA 264 348 8.81e-21 SMART
CA 372 453 2.01e-24 SMART
CA 477 563 1.42e-24 SMART
CA 591 673 1.63e-15 SMART
transmembrane domain 693 715 N/A INTRINSIC
low complexity region 902 926 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000192295
SMART Domains Protein: ENSMUSP00000142103
Gene: ENSMUSG00000104252

DomainStartEndE-ValueType
CA 20 131 5.3e-2 SMART
CA 155 240 1.51e-19 SMART
CA 264 348 7.6e-25 SMART
CA 372 453 1.42e-24 SMART
CA 477 568 5.38e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000192447
SMART Domains Protein: ENSMUSP00000142270
Gene: ENSMUSG00000102206

DomainStartEndE-ValueType
CA 21 131 1.5e-4 SMART
CA 155 240 3.6e-21 SMART
CA 264 347 2.8e-30 SMART
CA 371 452 1.5e-28 SMART
CA 476 562 6.8e-27 SMART
CA 593 675 4.9e-15 SMART
transmembrane domain 697 719 N/A INTRINSIC
low complexity region 783 794 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000192503
SMART Domains Protein: ENSMUSP00000141989
Gene: ENSMUSG00000102312

DomainStartEndE-ValueType
low complexity region 11 17 N/A INTRINSIC
CA 42 128 3.78e-2 SMART
CA 152 237 8.94e-22 SMART
CA 261 345 3.74e-24 SMART
CA 369 450 1.09e-25 SMART
CA 474 560 1.42e-24 SMART
CA 588 670 2.96e-13 SMART
transmembrane domain 692 714 N/A INTRINSIC
low complexity region 910 934 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000192512
SMART Domains Protein: ENSMUSP00000141408
Gene: ENSMUSG00000104252

DomainStartEndE-ValueType
CA 20 131 5.3e-2 SMART
CA 155 240 1.51e-19 SMART
CA 264 348 7.6e-25 SMART
CA 372 453 1.42e-24 SMART
CA 477 563 1.42e-24 SMART
CA 594 674 4.12e-12 SMART
low complexity region 706 721 N/A INTRINSIC
low complexity region 915 939 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000192631
SMART Domains Protein: ENSMUSP00000142156
Gene: ENSMUSG00000104318

DomainStartEndE-ValueType
CA 21 131 2.58e-2 SMART
CA 155 240 4.27e-19 SMART
CA 264 348 1.42e-24 SMART
CA 372 453 9.36e-25 SMART
CA 477 563 1.42e-24 SMART
CA 594 671 4.03e-6 SMART
transmembrane domain 696 718 N/A INTRINSIC
low complexity region 905 929 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000193389
SMART Domains Protein: ENSMUSP00000141459
Gene: ENSMUSG00000103707

DomainStartEndE-ValueType
CA 21 131 5.67e-2 SMART
CA 155 240 4.72e-21 SMART
CA 264 348 1.9e-25 SMART
CA 372 453 3.31e-25 SMART
CA 477 563 1.42e-24 SMART
CA 594 676 5.91e-13 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000193777
SMART Domains Protein: ENSMUSP00000141587
Gene: ENSMUSG00000103707

DomainStartEndE-ValueType
CA 21 131 5.67e-2 SMART
CA 155 240 4.72e-21 SMART
CA 264 348 1.9e-25 SMART
CA 372 453 3.31e-25 SMART
CA 477 563 1.42e-24 SMART
CA 594 676 5.91e-13 SMART
low complexity region 914 938 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000193839
SMART Domains Protein: ENSMUSP00000142308
Gene: ENSMUSG00000103442

DomainStartEndE-ValueType
CA 22 132 3.09e-2 SMART
CA 156 241 6.14e-20 SMART
CA 265 349 3.92e-27 SMART
CA 373 454 4.94e-24 SMART
CA 478 564 1e-24 SMART
CA 592 672 4.55e-14 SMART
transmembrane domain 694 716 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000193856
Predicted Effect probably benign
Transcript: ENSMUST00000193984
Predicted Effect probably benign
Transcript: ENSMUST00000194038
SMART Domains Protein: ENSMUSP00000142159
Gene: ENSMUSG00000103800

DomainStartEndE-ValueType
CA 20 131 6.34e-2 SMART
CA 155 240 4.27e-19 SMART
CA 264 348 2.04e-25 SMART
CA 372 453 2.84e-24 SMART
CA 477 563 9.88e-24 SMART
CA 594 676 8.62e-15 SMART
transmembrane domain 699 721 N/A INTRINSIC
low complexity region 914 938 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000194544
SMART Domains Protein: ENSMUSP00000141847
Gene: ENSMUSG00000102836

DomainStartEndE-ValueType
Blast:CA 18 66 5e-20 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000194751
SMART Domains Protein: ENSMUSP00000142285
Gene: ENSMUSG00000103707

DomainStartEndE-ValueType
low complexity region 15 21 N/A INTRINSIC
Pfam:Cadherin_2 29 112 4.5e-32 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000195590
SMART Domains Protein: ENSMUSP00000141355
Gene: ENSMUSG00000104148

DomainStartEndE-ValueType
CA 45 131 6.34e-2 SMART
CA 155 240 2.98e-18 SMART
CA 264 348 2.17e-29 SMART
CA 372 453 2.84e-24 SMART
CA 477 563 5.02e-25 SMART
CA 594 675 8.16e-16 SMART
transmembrane domain 695 717 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.6%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the protocadherin alpha gene cluster, one of three related gene clusters tandemly linked on chromosome five that demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The alpha gene cluster is composed of 15 cadherin superfamily genes related to the mouse CNR genes and consists of 13 highly similar and 2 more distantly related coding sequences. The tandem array of 15 N-terminal exons, or variable exons, are followed by downstream C-terminal exons, or constant exons, which are shared by all genes in the cluster. The large, uninterrupted N-terminal exons each encode six cadherin ectodomains while the C-terminal exons encode the cytoplasmic domain. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins that most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been observed and additional variants have been suggested but their full-length nature has yet to be determined. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a reporter allele are viable and fertile with no apparent gross phenotype. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 67 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4931422A03Rik G A 2: 103,856,499 (GRCm39) R21C unknown Het
4933407L21Rik G T 1: 85,859,118 (GRCm39) E90* probably null Het
Abca15 A G 7: 120,006,665 (GRCm39) Y1643C probably damaging Het
Adtrp G T 13: 41,969,630 (GRCm39) A123D probably damaging Het
Asmt A T X: 169,106,460 (GRCm39) D20V possibly damaging Het
Bid T C 6: 120,877,176 (GRCm39) E55G probably damaging Het
Brd3 A G 2: 27,351,725 (GRCm39) V176A probably benign Het
Btnl2 G T 17: 34,575,275 (GRCm39) probably null Het
Card11 A G 5: 140,875,794 (GRCm39) S562P probably damaging Het
Carmil1 T G 13: 24,220,562 (GRCm39) H1054P probably benign Het
Casp8 T G 1: 58,872,901 (GRCm39) M259R probably damaging Het
Ccin G A 4: 43,984,064 (GRCm39) R157H probably damaging Het
Cfap45 G A 1: 172,355,406 (GRCm39) R18Q possibly damaging Het
Chuk A G 19: 44,092,175 (GRCm39) I41T possibly damaging Het
Col28a1 G A 6: 8,154,175 (GRCm39) P333L possibly damaging Het
Cspg4b A T 13: 113,504,889 (GRCm39) D1979V Het
Ctnna3 T G 10: 64,838,377 (GRCm39) V818G probably damaging Het
Cyp4f18 G T 8: 72,742,935 (GRCm39) L456M probably benign Het
Ddx50 A G 10: 62,457,256 (GRCm39) V598A probably benign Het
Dhrs7b C A 11: 60,742,580 (GRCm39) Q91K probably benign Het
Dnah11 T A 12: 118,074,752 (GRCm39) T1367S probably benign Het
Fam98b T A 2: 117,093,335 (GRCm39) C183S probably benign Het
Fbxl12 C A 9: 20,550,160 (GRCm39) R165L possibly damaging Het
Fbxw15 A C 9: 109,388,828 (GRCm39) S194A probably benign Het
Flrt3 G T 2: 140,502,617 (GRCm39) P337Q probably damaging Het
Gm12695 A G 4: 96,612,183 (GRCm39) Y527H possibly damaging Het
Gramd1b T C 9: 40,215,820 (GRCm39) T677A probably benign Het
Grm8 A T 6: 27,363,281 (GRCm39) S745T probably damaging Het
Kctd8 T C 5: 69,267,803 (GRCm39) K436E probably benign Het
Klf5 G T 14: 99,539,540 (GRCm39) A318S possibly damaging Het
L3mbtl3 C T 10: 26,179,566 (GRCm39) V505M unknown Het
Letm2 A G 8: 26,076,672 (GRCm39) L310P probably damaging Het
Lrrc4 T C 6: 28,662,192 (GRCm39) H174R unknown Het
Myh11 T C 16: 14,036,718 (GRCm39) S995G Het
Myh7b A T 2: 155,474,824 (GRCm39) E1787D probably damaging Het
Myoc T C 1: 162,466,995 (GRCm39) S55P probably benign Het
Naaladl2 T C 3: 24,112,366 (GRCm39) Q572R probably damaging Het
Nanog T A 6: 122,688,736 (GRCm39) S131T probably benign Het
Nifk A G 1: 118,260,134 (GRCm39) K230E probably benign Het
Nlrp10 A G 7: 108,525,103 (GRCm39) S126P probably benign Het
Npc1l1 T A 11: 6,179,327 (GRCm39) K28* probably null Het
Or13m2-ps1 A G 6: 42,778,038 (GRCm39) D121G probably damaging Het
Or5b102 G A 19: 13,040,795 (GRCm39) V7M possibly damaging Het
Pcx A T 19: 4,651,758 (GRCm39) N45I probably damaging Het
Peak1 A G 9: 56,166,182 (GRCm39) V582A probably damaging Het
Plcxd3 G T 15: 4,546,218 (GRCm39) R74L probably damaging Het
Ptpn21 G A 12: 98,654,789 (GRCm39) A726V probably benign Het
Rftn1 G T 17: 50,354,408 (GRCm39) A318D probably damaging Het
Rimbp3 T C 16: 17,026,969 (GRCm39) V131A possibly damaging Het
Rrp1b A G 17: 32,276,163 (GRCm39) K570R probably benign Het
Serpinb1a A T 13: 33,029,720 (GRCm39) F167L probably damaging Het
Slc12a1 T C 2: 125,070,736 (GRCm39) L1076S probably damaging Het
Sspo A T 6: 48,425,453 (GRCm39) T25S probably benign Het
Syvn1 G A 19: 6,097,971 (GRCm39) R3H probably damaging Het
Tead2 A G 7: 44,878,166 (GRCm39) E280G probably benign Het
Tmem263 T A 10: 84,950,431 (GRCm39) V74E possibly damaging Het
Tmem38b T A 4: 53,854,332 (GRCm39) L188Q probably damaging Het
Tmod4 C T 3: 95,033,171 (GRCm39) T55I probably damaging Het
Tmprss12 A T 15: 100,180,146 (GRCm39) E62V probably benign Het
Trim27 G A 13: 21,364,780 (GRCm39) C39Y probably benign Het
Vmn2r110 A G 17: 20,816,490 (GRCm39) L11S probably damaging Het
Vmn2r125 A G 4: 156,702,373 (GRCm39) Y53C probably damaging Het
Vmn2r65 A T 7: 84,596,817 (GRCm39) F79L probably benign Het
Vps13a A G 19: 16,727,209 (GRCm39) probably null Het
Zdbf2 A G 1: 63,345,142 (GRCm39) T1174A probably benign Het
Zfhx4 T G 3: 5,308,927 (GRCm39) S718A probably damaging Het
Zfp78 A G 7: 6,376,213 (GRCm39) T41A probably benign Het
Other mutations in Pcdhac2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00094:Pcdhac2 APN 18 37,278,128 (GRCm39) missense probably damaging 1.00
IGL01400:Pcdhac2 APN 18 37,279,339 (GRCm39) missense possibly damaging 0.79
IGL02302:Pcdhac2 APN 18 37,279,006 (GRCm39) missense probably damaging 0.99
IGL02381:Pcdhac2 APN 18 37,277,320 (GRCm39) missense possibly damaging 0.94
IGL02644:Pcdhac2 APN 18 37,278,232 (GRCm39) missense probably benign
IGL02645:Pcdhac2 APN 18 37,278,292 (GRCm39) missense probably damaging 0.97
IGL03087:Pcdhac2 APN 18 37,278,735 (GRCm39) missense probably damaging 1.00
R0004:Pcdhac2 UTSW 18 37,278,290 (GRCm39) missense probably benign 0.21
R0374:Pcdhac2 UTSW 18 37,278,720 (GRCm39) missense probably damaging 1.00
R0540:Pcdhac2 UTSW 18 37,278,942 (GRCm39) missense probably benign 0.02
R0589:Pcdhac2 UTSW 18 37,279,527 (GRCm39) missense probably benign
R0607:Pcdhac2 UTSW 18 37,278,942 (GRCm39) missense probably benign 0.02
R1537:Pcdhac2 UTSW 18 37,279,539 (GRCm39) missense possibly damaging 0.51
R1545:Pcdhac2 UTSW 18 37,279,186 (GRCm39) missense possibly damaging 0.93
R1878:Pcdhac2 UTSW 18 37,278,215 (GRCm39) missense possibly damaging 0.71
R2139:Pcdhac2 UTSW 18 37,279,139 (GRCm39) nonsense probably null
R2197:Pcdhac2 UTSW 18 37,279,185 (GRCm39) missense probably damaging 0.99
R2680:Pcdhac2 UTSW 18 37,278,639 (GRCm39) missense possibly damaging 0.82
R2882:Pcdhac2 UTSW 18 37,278,865 (GRCm39) missense probably damaging 1.00
R3719:Pcdhac2 UTSW 18 37,279,288 (GRCm39) missense possibly damaging 0.59
R4256:Pcdhac2 UTSW 18 37,277,764 (GRCm39) missense probably damaging 1.00
R4407:Pcdhac2 UTSW 18 37,277,499 (GRCm39) missense probably benign 0.00
R4426:Pcdhac2 UTSW 18 37,277,796 (GRCm39) missense probably benign 0.00
R4698:Pcdhac2 UTSW 18 37,278,822 (GRCm39) missense probably damaging 1.00
R4737:Pcdhac2 UTSW 18 37,278,952 (GRCm39) missense possibly damaging 0.95
R4950:Pcdhac2 UTSW 18 37,278,283 (GRCm39) missense probably benign 0.06
R4993:Pcdhac2 UTSW 18 37,279,304 (GRCm39) missense probably damaging 0.96
R5127:Pcdhac2 UTSW 18 37,277,352 (GRCm39) nonsense probably null
R5446:Pcdhac2 UTSW 18 37,278,253 (GRCm39) missense probably damaging 1.00
R5598:Pcdhac2 UTSW 18 37,277,476 (GRCm39) missense probably damaging 1.00
R5615:Pcdhac2 UTSW 18 37,279,477 (GRCm39) missense probably benign
R5615:Pcdhac2 UTSW 18 37,279,476 (GRCm39) missense probably benign 0.22
R5620:Pcdhac2 UTSW 18 37,277,257 (GRCm39) missense probably benign
R5661:Pcdhac2 UTSW 18 37,278,499 (GRCm39) missense probably damaging 0.97
R5760:Pcdhac2 UTSW 18 37,279,453 (GRCm39) missense probably damaging 1.00
R6102:Pcdhac2 UTSW 18 37,279,335 (GRCm39) nonsense probably null
R6310:Pcdhac2 UTSW 18 37,278,824 (GRCm39) nonsense probably null
R6493:Pcdhac2 UTSW 18 37,277,758 (GRCm39) missense probably damaging 1.00
R6695:Pcdhac2 UTSW 18 37,278,256 (GRCm39) missense probably benign 0.00
R6827:Pcdhac2 UTSW 18 37,277,706 (GRCm39) missense probably benign 0.03
R6953:Pcdhac2 UTSW 18 37,277,479 (GRCm39) missense probably benign
R7140:Pcdhac2 UTSW 18 37,277,239 (GRCm39) missense possibly damaging 0.89
R7162:Pcdhac2 UTSW 18 37,278,840 (GRCm39) missense probably benign 0.13
R7242:Pcdhac2 UTSW 18 37,277,946 (GRCm39) missense possibly damaging 0.82
R7325:Pcdhac2 UTSW 18 37,278,413 (GRCm39) missense probably damaging 1.00
R7640:Pcdhac2 UTSW 18 37,277,578 (GRCm39) missense probably damaging 1.00
R7654:Pcdhac2 UTSW 18 37,278,076 (GRCm39) missense probably damaging 1.00
R7810:Pcdhac2 UTSW 18 37,278,717 (GRCm39) missense probably benign 0.18
R8072:Pcdhac2 UTSW 18 37,278,717 (GRCm39) missense probably benign 0.18
R8079:Pcdhac2 UTSW 18 37,279,197 (GRCm39) missense probably damaging 0.96
R8489:Pcdhac2 UTSW 18 37,278,207 (GRCm39) missense probably damaging 1.00
R8893:Pcdhac2 UTSW 18 37,277,071 (GRCm39) missense probably benign
R9035:Pcdhac2 UTSW 18 37,277,758 (GRCm39) missense probably damaging 1.00
R9189:Pcdhac2 UTSW 18 37,277,316 (GRCm39) missense probably benign 0.00
R9262:Pcdhac2 UTSW 18 37,279,095 (GRCm39) missense possibly damaging 0.71
R9626:Pcdhac2 UTSW 18 37,279,555 (GRCm39) missense probably damaging 0.99
R9688:Pcdhac2 UTSW 18 37,277,628 (GRCm39) missense probably benign 0.01
T0970:Pcdhac2 UTSW 18 37,278,388 (GRCm39) missense possibly damaging 0.61
Predicted Primers PCR Primer
(F):5'- TACCGTGGCCATCACAGTAG -3'
(R):5'- AAAGTATCACTCCCTGAGCCTG -3'

Sequencing Primer
(F):5'- GGACAGGGTTTCTAAAATGCTCCC -3'
(R):5'- TCCCTGAGCCTGCTGTCAG -3'
Posted On 2020-07-28