Incidental Mutation 'R8278:Socs3'
ID 638078
Institutional Source Beutler Lab
Gene Symbol Socs3
Ensembl Gene ENSMUSG00000053113
Gene Name suppressor of cytokine signaling 3
Synonyms SSI-3, cytokine-inducible SH2 protein 3, STAT-induced STAT inhibitor 3, EF-10, E2a-Pbx1 target gene in fibroblasts 10, SOCS-3, CIS3, Cish3
MMRRC Submission 067701-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R8278 (G1)
Quality Score 225.009
Status Not validated
Chromosome 11
Chromosomal Location 117856905-117860192 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) A to T at 117858478 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Cysteine to Stop codon at position 193 (C193*)
Ref Sequence ENSEMBL: ENSMUSP00000059129 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000054002]
AlphaFold O35718
PDB Structure solution structure of mouse socs3 in complex with a phosphopeptide from the gp130 receptor [SOLUTION NMR]
Crystal structure of SOCS3 in complex with gp130(pTyr757) phosphopeptide. [X-RAY DIFFRACTION]
SOCS box elonginBC ternary complex [SOLUTION NMR]
Crystal structure of inhibitory protein SOCS3 in complex with JAK2 kinase domain and fragment of GP130 intracellular domain [X-RAY DIFFRACTION]
Predicted Effect probably null
Transcript: ENSMUST00000054002
AA Change: C193*
SMART Domains Protein: ENSMUSP00000059129
Gene: ENSMUSG00000053113
AA Change: C193*

DomainStartEndE-ValueType
SH2 44 133 2.21e-20 SMART
SOCS 180 222 2.66e-14 SMART
SOCS_box 186 221 6.37e-4 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.5%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the STAT-induced STAT inhibitor (SSI), also known as suppressor of cytokine signaling (SOCS), family. SSI family members are cytokine-inducible negative regulators of cytokine signaling. The expression of this gene is induced by various cytokines, including IL6, IL10, and interferon (IFN)-gamma. The protein encoded by this gene can bind to JAK2 kinase, and inhibit the activity of JAK2 kinase. Studies of the mouse counterpart of this gene suggested the roles of this gene in the negative regulation of fetal liver hematopoiesis, and placental development. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for mutations cause impairment if gene expression show immunological and hematopoetic abnormalities. Complete gene disruption causes lethality. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930562C15Rik A T 16: 4,668,040 (GRCm39) Q477L probably benign Het
Adcy10 A T 1: 165,330,857 (GRCm39) D40V probably damaging Het
Cab39l T C 14: 59,776,562 (GRCm39) Y248H probably damaging Het
Casr G T 16: 36,336,011 (GRCm39) D99E probably damaging Het
Cdh16 T C 8: 105,345,107 (GRCm39) E364G probably benign Het
Cep104 C T 4: 154,068,122 (GRCm39) T189I possibly damaging Het
Cfap418 T A 4: 10,882,474 (GRCm39) probably null Het
Chd7 T A 4: 8,862,485 (GRCm39) probably null Het
Chit1 G A 1: 134,078,332 (GRCm39) R380Q probably benign Het
Cpne2 A G 8: 95,281,316 (GRCm39) K174R probably damaging Het
Dchs2 T A 3: 83,178,310 (GRCm39) I1121N probably damaging Het
Fgf6 A T 6: 126,992,781 (GRCm39) Y78F probably damaging Het
H2-T10 A T 17: 36,429,832 (GRCm39) N320K probably benign Het
Heatr3 A T 8: 88,883,361 (GRCm39) N398I possibly damaging Het
Hrh4 T C 18: 13,140,284 (GRCm39) S60P probably damaging Het
Ikbip A G 10: 90,932,190 (GRCm39) H278R probably benign Het
Jmy A T 13: 93,601,224 (GRCm39) I394N probably damaging Het
Klhl8 T C 5: 104,022,107 (GRCm39) E314G probably benign Het
Lhx9 A T 1: 138,766,324 (GRCm39) C164S probably damaging Het
Loxl3 G T 6: 83,025,697 (GRCm39) G352C probably damaging Het
Lrrk1 A G 7: 65,928,432 (GRCm39) F1232S probably benign Het
Mpnd A G 17: 56,319,469 (GRCm39) T311A probably benign Het
Mpp7 A T 18: 7,444,025 (GRCm39) D132E probably benign Het
Nck2 T C 1: 43,593,740 (GRCm39) S316P probably damaging Het
Nckap5 T C 1: 125,955,509 (GRCm39) S348G probably damaging Het
Nyap1 C T 5: 137,730,077 (GRCm39) R790H probably damaging Het
Or5b124 C T 19: 13,610,958 (GRCm39) T161I possibly damaging Het
Pdcd11 G A 19: 47,094,736 (GRCm39) V507I probably damaging Het
Pdzd2 T C 15: 12,375,995 (GRCm39) H1380R probably benign Het
Pgap1 C T 1: 54,529,430 (GRCm39) V763I probably benign Het
Pnma8b G T 7: 16,680,263 (GRCm39) V416L probably damaging Het
Prkn A T 17: 12,269,609 (GRCm39) N421Y probably benign Het
Prpf4 T C 4: 62,333,493 (GRCm39) probably null Het
Psmb5 C T 14: 54,855,342 (GRCm39) G36D probably benign Het
Ptprq A G 10: 107,522,239 (GRCm39) S571P possibly damaging Het
Rap1gap A C 4: 137,444,748 (GRCm39) S254R probably damaging Het
Rufy2 A T 10: 62,843,472 (GRCm39) D492V probably benign Het
Ryr2 C A 13: 11,610,392 (GRCm39) E4145* probably null Het
Sgsm1 A G 5: 113,407,958 (GRCm39) F898L probably damaging Het
Slc26a9 C A 1: 131,689,514 (GRCm39) A487D possibly damaging Het
Slc6a15 T C 10: 103,229,890 (GRCm39) probably null Het
Smad9 A T 3: 54,696,687 (GRCm39) T251S probably benign Het
Sox6 T A 7: 115,076,199 (GRCm39) D813V probably damaging Het
Taf2 A T 15: 54,929,361 (GRCm39) L65* probably null Het
Taf6 G A 5: 138,178,097 (GRCm39) A468V probably benign Het
Tmem71 T C 15: 66,426,961 (GRCm39) D78G probably damaging Het
Tob2 T C 15: 81,735,288 (GRCm39) N227S probably benign Het
Trim34a C A 7: 103,898,623 (GRCm39) Q180K probably damaging Het
Ugt1a9 T C 1: 87,999,378 (GRCm39) L276P possibly damaging Het
Wdr33 G A 18: 31,960,405 (GRCm39) R23Q possibly damaging Het
Wnt7b T G 15: 85,427,887 (GRCm39) N189H Het
Zfp609 G A 9: 65,604,804 (GRCm39) A1308V possibly damaging Het
Other mutations in Socs3
AlleleSourceChrCoordTypePredicted EffectPPH Score
R1483:Socs3 UTSW 11 117,858,394 (GRCm39) nonsense probably null
R4846:Socs3 UTSW 11 117,858,654 (GRCm39) missense probably benign
R4998:Socs3 UTSW 11 117,858,542 (GRCm39) missense probably damaging 1.00
R5789:Socs3 UTSW 11 117,858,608 (GRCm39) missense probably benign 0.28
R7174:Socs3 UTSW 11 117,858,553 (GRCm39) nonsense probably null
R7311:Socs3 UTSW 11 117,858,614 (GRCm39) missense probably benign 0.01
R7620:Socs3 UTSW 11 117,858,396 (GRCm39) missense probably damaging 1.00
X0063:Socs3 UTSW 11 117,858,445 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- CTGAGGAAGAAGCCAATCTGC -3'
(R):5'- TTCTTTGCCACCCACGGAAC -3'

Sequencing Primer
(F):5'- AGAAGCCAATCTGCCCCTGG -3'
(R):5'- GAACCCTCGTCCGAAGTTC -3'
Posted On 2020-07-28